BAC Information

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BAC

Clone NameB6Ng01-098O15
Chromosome8 (Build37)
Map Location 4,014,959 - 4,016,014
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664801, EG209786, D630014A15Rik, Insr, A430078G23Rik, Arhgef18, Pex11c, 1700019B03Rik, Zfp358, Mcoln1, Pnpla6, C330021F23Rik, 2310057J16Rik, Xab2, Pcp2, Stxbp2, Retn, 1810033B17Rik, LOC664858, Trappc5, Fcer2a, Clec4g, Cd209a, LOC664870, Cd209e, Cd209d, Cd209b, Cd209c, LOC664888
Downstream geneEG384770, EG664905, LOC664915, LOC664922, LOC631071, Cd209f, Cd209g, B130050I23Rik, BC068157, Lrrc8e, Map2k7, LOC100039590, Snapc2, Ctxn1, Timm44, Elavl1, Ccl25, LOC664977, Ppia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267, LOC665021, EG623133, EG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098O15.bB6Ng01-098O15.g
ACCDH908857DH908858
length1,1061,052
definitionDH908857|Mus musculus domesticus DNA, BAC clone: B6Ng01-098O15, 5' end.DH908858|Mus musculus domesticus DNA, BAC clone: B6Ng01-098O15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagaatgttacagtaacattcagaattacctctagtattgt
aagagagacagtgaaagaaatcaggcattacaatttacttgaatagagct
agtaatctcagggctagtctacatagtatacttagaaaaacagcagagtc
actcccacacacagaaatttacaatgacctaggaagaaggaaggttgtgg
tctaagaaggaactagagtaaatacttagaacaatagatagtagagtcac
tcccatacacaggaatttgcaatggcctagggggaagatgaactatacaa
tagattagaattggaactatggcaagggcatgaagcccttacccctggct
tctaagaataagctgaccttaggtggggttgcttttgatcccagttgtta
acattgatttttatcccaattggttcctgttagctatttgtatgcattcc
tctgttttgtgtaaaagtcacttaaaagtctgatgcttgctttgagacaa
attgcattcagatacaacactcccttgtgtttgtgtctgtttgtcaccct
tttcgatgactccctgcccacctgtacagtgaccctaatttctcctgtgg
attgaggggggctgactgaggttagtccacagcatctaccctctgcagag
gggagcagatattaagtttgtgacatgactcccagcaccaaccaatcatg
ttaaaggccacagtagctttccaattagatgctttccacacatactcctt
gctttctgcttactataaagtcatttggggctccaccaccaccaaaagaa
tcctacatgaccgtgcattgcagggggtgggggcaggagctagctgaaat
agagtaaagaccctgctgtgagttgcatcagattggctttctgtctgttt
gtgggggatcactaaacctttccctgggcactacaaaggaacacctacct
aaattctttcaattgaggaactcagctacctaaaaccacacaaggggtca
accaatggagaggaacttccgaccatttttatgagcactaaattcaaatt
acctcataatttattgcaacatatccaagaaccaatcaacacatcgtcat
tccagt
gaattctccctcacccacctgtcttcctccactcaccgtcctctttatat
gcatccttagttaggaaagaagtttgctgctctcattaggtggacctggg
gcttcctgcagccactcattgcttcaacctcttctctgctgggtggatcc
tgtttttgactgtggctgtgtcttccgctttcctcatcaaagccctcagg
cctttggatggtttggctaaaagttgttacaactcaagagaagctcggag
gagttgacagatgctgtgaggttaactctggaatcattcaggtccaggtg
tacctcagagagcagtgttggctgcgtctgaccacgtggagtcgtctgga
cctgctggagcctgcttagtcgcatgtgttgtgtttgtcctacttcttgg
gattctgctctgagtgttggaagtgataagcagctttcttcttactccct
agacttggacatgcccccaggctaagagatttggacatgcccccaagata
cttggcttcttactgagaagaaacagttggtgatctcctgttacacatct
ctgagagtgaaagccctttatcctctgtgcctggaaaagttctggtcctg
gagcagcagcacagcttgagttcccttgtgtgtcacctattacgctgcct
tattccacaagggtcacatgctgctcacctatctgccctgtggttaaatt
ggtcacaggctagtctccctggagggcctggcacagttctctgtagcccg
agggaaaggcttcacaaagtagctgatgaagtcactcatgagttctggct
cagtggccttcttgtagtgtgggcttggttgggggctccagctttttctt
gagcctcaggtgtgtctgctctcatcctgccccttctggatgggtgggaa
aaccctcacccatcccttaccccatccgtccttagactaggaggaaggtc
accctgcctgcagggagagttcatctcaccccctgtctttccatggtaga
cattaaagcatgatagtctgggttgcccttaggcagagaaataaaggtgg
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_4014959_4016014
seq2: B6Ng01-098O15.g_68_1119 (reverse)

seq1  CCCCATCTTTTTTTCTCCTGCATAAGGGCAACACAGACTATCATGCTTTA  50
      ||||| |||| ||||| |||| |||||||||| |||||||||||||||||
seq2  CCCCACCTTTATTTCT-CTGCCTAAGGGCAACCCAGACTATCATGCTTTA  49

seq1  ATGTCTACATGGGAAAGACAGGGGGCTGAGATGAACTCTCACCTGCAGGC  100
      ||||||||   |||||||||||||| |||||||||||||| |||||||||
seq2  ATGTCTACCATGGAAAGACAGGGGG-TGAGATGAACTCTC-CCTGCAGGC  97

seq1  AGGGTGACCTTCCTCCTAGTCTAAGGACGGATGGGGTAAGGGATGGGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGACCTTCCTCCTAGTCTAAGGACGGATGGGGTAAGGGATGGGTGA  147

seq1  GGGTTTTCCCAACCATCCAGGAGGGGCAGGATGAGAGCAGACACACCTGA  200
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  GGGTTTTCCCACCCATCCAGAAGGGGCAGGATGAGAGCAGACACACCTGA  197

seq1  GGCTCAAGAAAAAGGCTGGAGCCCCCAACCAAGCCCACACTACAAGAAGG  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGCTCAAGAAAAA-GCTGGAGCCCCCAACCAAGCCCACACTACAAGAAGG  246

seq1  CCACTGAGCCAGAACTCATGAGTGACTTCATCAGCTACTTTGTGAAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAGCCAGAACTCATGAGTGACTTCATCAGCTACTTTGTGAAGCCT  296

seq1  TTCCCTCGGGCTACAGAGAACTGTGCCAGGCCCTCCAGGGAGACTAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCGGGCTACAGAGAACTGTGCCAGGCCCTCCAGGGAGACTAGCCT  346

seq1  GTGACCAATTTAACCACAGGGCAGATAGGTGAGCAGCATGTGACCCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCAATTTAACCACAGGGCAGATAGGTGAGCAGCATGTGACCCTTGT  396

seq1  GGAATAAGGCAGCGTAATAGGTGACACACAAGGGAACTCAAGCTGTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAGGCAGCGTAATAGGTGACACACAAGGGAACTCAAGCTGTGCTG  446

seq1  CTGCTCCAGGACCAGAACTTTTCCAGGCACAGAGGATAAAGGGCTTTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCAGGACCAGAACTTTTCCAGGCACAGAGGATAAAGGGCTTTCAC  496

seq1  TCTCAGAGATGTGTAACAGGAGATCACCAACTGTTTCTTCTCAGTAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGATGTGTAACAGGAGATCACCAACTGTTTCTTCTCAGTAAGAA  546

seq1  GCCAAGTATCTTGGGGGCATGTCCAAATCTCTTAGCCTGGGGGCATGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTATCTTGGGGGCATGTCCAAATCTCTTAGCCTGGGGGCATGTCC  596

seq1  AAGTCTAGGGAGTAAGAAGAAAGCTGCTTATCACTTCCAACACTCAGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGGGAGTAAGAAGAAAGCTGCTTATCACTTCCAACACTCAGAGC  646

seq1  AGAATCCCAAGAAGTAGGACAAACACAACACATGCGACTAAGCAGGCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCCAAGAAGTAGGACAAACACAACACATGCGACTAAGCAGGCTCC  696

seq1  AGCAGGTCCAGACGACTCCACGTGGTCAGACGCAGCCAACACTGCTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTCCAGACGACTCCACGTGGTCAGACGCAGCCAACACTGCTCTCT  746

seq1  GAGGTACACCTGGACCTGAATGATTCCAGAGTTAACCTCACAGCATCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACACCTGGACCTGAATGATTCCAGAGTTAACCTCACAGCATCTGT  796

seq1  CAACTCCTCCGAGCTTCTCTTGAGTTGTAACAACTTTTAGCCAAACCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCTCCGAGCTTCTCTTGAGTTGTAACAACTTTTAGCCAAACCATC  846

seq1  CAAAGGCCTGAGGGCTTTGATGAGGAAAGCGGAAGACACAGCCACAGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCCTGAGGGCTTTGATGAGGAAAGCGGAAGACACAGCCACAGTCA  896

seq1  AAAACAGGATCCACCCAGCAGAGAAGAGGTTGAAGCAATGAGTGGCTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGATCCACCCAGCAGAGAAGAGGTTGAAGCAATGAGTGGCTGCA  946

seq1  GGAAGCCCCAGGTCCACCTAATGAGAGCAGCAAACTTCTTTCCTAACTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCCCAGGTCCACCTAATGAGAGCAGCAAACTTCTTTCCTAACTAA  996

seq1  GGATGCATATAAAGAGGACGGTGAGTGGAGGAAGACAGGTGGGTGAGGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCATATAAAGAGGACGGTGAGTGGAGGAAGACAGGTGGGTGAGGGA  1046

seq1  GAATTC  1056
      ||||||
seq2  GAATTC  1052