BAC Information

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BAC

Clone NameB6Ng01-098P02
Chromosome8 (Build37)
Map Location 115,289,517 - 115,464,288
singlet/doubletdoublet
Overlap geneCntnap4, LOC100042061
Upstream geneCfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498, LOC100042040
Downstream geneMon1b, 4930481F22Rik, Adamts18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098P02.bB6Ng01-098P02.g
ACCDH908877DH908878
length527789
definitionDH908877|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P02, 5' end.DH908878|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,463,756 - 115,464,288)(115,289,517 - 115,290,305)
sequence
agatgctaatatgagctttacaagcttcaagttacttatacatatactta
atatctttcatttcatgattttttttctgagagagagaataatatgcagt
catggctcgaaagttaaagcaggggacattctgattataattacatgcag
tattaaattggttttaaaatttcaagacaaaatgattatattttcacttc
acaatgattggtatccatccacactttcggtcagtcataatatggaagga
gaaatactggacacaagcaacaagtgttataagatgtagcttgaatatca
ttcatcaatttgagggatgtttacctagctgaggactaagtggaacgagt
aagaatatccctcagatatacgatatggaaattattaatgctgtgttcat
ttaaagcacggattaaatccattacccttgaaaacttggttttactaaat
cattaaaagttttctacagatgaatacattaaagggggcaagatgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctttaatgtcattagaggagttgggagatggtgctgtgagtaaga
gtgcttatacaacaatgaggaggtaagtttgagtccccagcagccaaata
aaaagctagggtagcagtgcacatccctttgaccaagttctaggaaatgt
agagctaggagcttcacctgagcttgctggccgacaaccagaaattggtc
taaatgtaagtatccagcctgccttctttcctcctgtgtccaagttgaaa
aaaaggattcttttcttggatggtagaatagtattctaactcctgagtaa
gatttgtgtcccttttaatataaccatgacaaaacaatgtgaacaattta
agagcgtttggggggcattttaaaactgtaattgtgagggaaccacactc
agtgtaagaaagcaatttaaatgtctccttgggttttgtagggtggtagg
acttttgtttactggctgagatgttctctggctgtaagagtgactggcac
acccaccacagagagctcagcttccctgtcccccatttggccttggctgt
ggccattgtagttataattgcctttgagaggaagagcaaggacatgagtg
ttgccgtaggaagaactggagaatgtgttttagtggaaactccttggttt
ttattacagcaacatttactttatataaaagtatgagtctaattagaatt
gtgtctcttacgcataaagagtagagtgagtgagataaagtaagagggag
ggagagcataagcaagagataggctgtgagagaggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_115463756_115464288
seq2: B6Ng01-098P02.b_46_578 (reverse)

seq1  CACACACACACACACACACACACACACACACACATCTTGCCCCCTTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACATCTTGCCCCCTTTAAT  50

seq1  GTATTCATCTGTAGAAAACTTTTAATGATTTAGTAAAACCAAGTTTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCATCTGTAGAAAACTTTTAATGATTTAGTAAAACCAAGTTTTCAA  100

seq1  GGGTAATGGATTTAATCCGTGCTTTAAATGAACACAGCATTAATAATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATGGATTTAATCCGTGCTTTAAATGAACACAGCATTAATAATTTC  150

seq1  CATATCGTATATCTGAGGGATATTCTTACTCGTTCCACTTAGTCCTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCGTATATCTGAGGGATATTCTTACTCGTTCCACTTAGTCCTCAGC  200

seq1  TAGGTAAACATCCCTCAAATTGATGAATGATATTCAAGCTACATCTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAACATCCCTCAAATTGATGAATGATATTCAAGCTACATCTTATA  250

seq1  ACACTTGTTGCTTGTGTCCAGTATTTCTCCTTCCATATTATGACTGACCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGTTGCTTGTGTCCAGTATTTCTCCTTCCATATTATGACTGACCG  300

seq1  AAAGTGTGGATGGATACCAATCATTGTGAAGTGAAAATATAATCATTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTGGATGGATACCAATCATTGTGAAGTGAAAATATAATCATTTTG  350

seq1  TCTTGAAATTTTAAAACCAATTTAATACTGCATGTAATTATAATCAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAATTTTAAAACCAATTTAATACTGCATGTAATTATAATCAGAAT  400

seq1  GTCCCCTGCTTTAACTTTCGAGCCATGACTGCATATTATTCTCTCTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCTGCTTTAACTTTCGAGCCATGACTGCATATTATTCTCTCTCTCA  450

seq1  GAAAAAAAATCATGAAATGAAAGATATTAAGTATATGTATAAGTAACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAATCATGAAATGAAAGATATTAAGTATATGTATAAGTAACTTG  500

seq1  AAGCTTGTAAAGCTCATATTAGCATCTGAATTC  533
      |||||||||||||||||||||||||||||||||
seq2  AAGCTTGTAAAGCTCATATTAGCATCTGAATTC  533

seq1: chr8_115289517_115290305
seq2: B6Ng01-098P02.g_70_858

seq1  GAATTCTTTAATGTCATTAGAGGAGTTGGGAGATGGTGCTGTGAGTAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAATGTCATTAGAGGAGTTGGGAGATGGTGCTGTGAGTAAGA  50

seq1  GTGCTTATACAACAATGAGGAGGTAAGTTTGAGTCCCCAGCAGCCAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTATACAACAATGAGGAGGTAAGTTTGAGTCCCCAGCAGCCAAATA  100

seq1  AAAAGCTAGGGTAGCAGTGCACATCCCTTTGACCAAGTTCTAGGAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTAGGGTAGCAGTGCACATCCCTTTGACCAAGTTCTAGGAAATGT  150

seq1  AGAGCTAGGAGCTTCACCTGAGCTTGCTGGCCGACAACCAGAAATTGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAGGAGCTTCACCTGAGCTTGCTGGCCGACAACCAGAAATTGGTC  200

seq1  TAAATGTAAGTATCCAGCCTGCCTTCTTTCCTCCTGTGTCCAAGTTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTAAGTATCCAGCCTGCCTTCTTTCCTCCTGTGTCCAAGTTGAAA  250

seq1  AAAAGGATTCTTTTCTTGGATGGTAGAATAGTATTCTAACTCCTGAGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGATTCTTTTCTTGGATGGTAGAATAGTATTCTAACTCCTGAGTAA  300

seq1  GATTTGTGTCCCTTTTAATATAACCATGACAAAACAATGTGAACAATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTGTCCCTTTTAATATAACCATGACAAAACAATGTGAACAATTTA  350

seq1  AGAGCGTTTGGGGGGCATTTTAAAACTGTAATTGTGAGGGAACCACACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCGTTTGGGGGGCATTTTAAAACTGTAATTGTGAGGGAACCACACTC  400

seq1  AGTGTAAGAAAGCAATTTAAATGTCTCCTTGGGTTTTGTAGGGTGGTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAAGAAAGCAATTTAAATGTCTCCTTGGGTTTTGTAGGGTGGTAGG  450

seq1  ACTTTTGTTTACTGGCTGAGATGTTCTCTGGCTGTAAGAGTGACTGGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTTTACTGGCTGAGATGTTCTCTGGCTGTAAGAGTGACTGGCAC  500

seq1  ACCCACCACAGAGAGCTCAGCTTCCCTGTCCCCCATTTGGCCTTGGCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCACAGAGAGCTCAGCTTCCCTGTCCCCCATTTGGCCTTGGCTGT  550

seq1  GGCCATTGTAGTTATAATTGCCTTTGAGAGGAAGAGCAAGGACATGAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTGTAGTTATAATTGCCTTTGAGAGGAAGAGCAAGGACATGAGTG  600

seq1  TTGCCGTAGGAAGAACTGGAGAATGTGTTTTAGTGGAAACTCCTTGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGTAGGAAGAACTGGAGAATGTGTTTTAGTGGAAACTCCTTGGTTT  650

seq1  TTATTACAGCAACATTTACTTTATATAAAAGTATGAGTCTAATTAGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACAGCAACATTTACTTTATATAAAAGTATGAGTCTAATTAGAATT  700

seq1  GTGTCTCTTACGCATAAAGAGTAGAGTGAGTGAGATAAAGTAAGAGGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTTACGCATAAAGAGTAGAGTGAGTGAGATAAAGTAAGAGGGAG  750

seq1  GGAGAGCAAAAGCAAGAGATAGGCTGTGAGAGAGGGGGA  789
      |||||||| ||||||||||||||||||||||||||||||
seq2  GGAGAGCATAAGCAAGAGATAGGCTGTGAGAGAGGGGGA  789