BAC Information

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BAC

Clone NameB6Ng01-099O07
Chromosome8 (Build37)
Map Location 62,849,268 - 62,850,369
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneAadat, Mfap3l, LOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099O07.bB6Ng01-099O07.g
ACCDH909560DH909561
length1,2141,110
definitionDH909560|Mus musculus domesticus DNA, BAC clone: B6Ng01-099O07, 5' end.DH909561|Mus musculus domesticus DNA, BAC clone: B6Ng01-099O07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatattttaatggggttatttgatt
ttctggagcccaccttcttgagttctttatatatactggatattagtccc
ctatctgatttaggataggtaaagatactttcccaatcttttggtggcct
ttttgtcttattgacgatgtcttttgctttgcagaagctttgcagtttca
tgcggtcccatttgtcaattctcaatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcgagggttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtccaaggagataggaatggatcaatttgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaagat
gctgtcttttttccattggatggtttttgctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtctttaattctattccattgg
tctacttgtctgtcgctatatcagtaccatggagtttttatcacaattgc
tctgtagtacagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcagattgctctttctaattcattgaagaattgagttggaatttt
gatggagattgcattgaatctgtagattgcttctggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctatatttctttcttcagagacttgaagttcttatcatac
agatcttcattttcttagttagagttatgccaaggaattttatatatttg
tgactattgagaagggtgtgtttccctaatttcttcctcagctgttattc
cttggtgtaggagaaggcaattgacttgtttgagtactttatatcagcta
cttcacccagcctgttatcagttaggagtctcttggtggaattaaggcac
tagtaactactatcatctgccaaaagtgaatttgactcatctttcccatt
gatcccgtatccttgttggcaatgcctggcagactcaagcatgtctgaag
ggagagaaagatgg
gaattccaacagcatgtttctttgccaaaactcacctccagtggaactca
aggcgcacatcccttacccatccttaatgctaagctttctaataaaactc
acctctataaatatccctctgctctgccttatctaaattgcaatatagct
tattccagtttgcctctgtttgtgttttcaaagtaaacaacaaagaaaca
gagccttttctggattattaattattttaggaatccagcatataaacttg
aacttggctatggtggagggataagaaaagatcaataaagcttaatgaat
aattggcagaaataaattgcttcattttgtgttgtttgtataagcaccga
cacacactatcccatgggaattttaaaaagtgaaaaaaaaagcaaaaagc
taaacagtattctaattggaaacagagaatgaaaggacacagaaattggc
actgtataaggaaggagggaagaaatgttgaaaagcaggcagaaagggag
tgttttcattgtttgaccaattcttcatcgttgccatggcccccgaatgt
ggtgagtagtagatcatacacagcacaagcctagttcagagatactaaag
cacaggagaaatgatgacaactgcgtgtttcatctgtgacatgtgataaa
caagcctctctaaaatccatgacaaagctatagattttaacatagaatta
tccgtttaagaaaatgaacaaaagaatcaatgtacacacacctgtgaggt
gattattaaaccaattacattttctttaacaaaaaatactttcacagaag
taatttttctacaaatgatgggtttggttaaaaacaaaattaaatttact
ctgttttataaagacaagtttatatacattttcactgtaatatttcacaa
gcatattgttacttaaattaatttaataagacagcagttggcttgggatg
ctatttcaacatagcctagtaatggtaactggttgttccatcatccaatt
tattggtgatcaccacaaaagtgtcacaaaaatagctattttccatggta
aaaattgttcctttccctgggattttattgcttggatgaagggtgtatgg
acctaaaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_62849268_62850369
seq2: B6Ng01-099O07.g_70_1179

seq1  GAATTCCAACAGCATGTTTCTTTGCCAAAACTCACCTCCAGTGGAACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACAGCATGTTTCTTTGCCAAAACTCACCTCCAGTGGAACTCA  50

seq1  AGGCGCACATCCCTTACCCATCCTTAATGCTAAGCTTTCTAATAAAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGCACATCCCTTACCCATCCTTAATGCTAAGCTTTCTAATAAAACTC  100

seq1  ACCTCTATAAATATCCCTCTGCTCTGCCTTATCTAAATTGCAATATAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTATAAATATCCCTCTGCTCTGCCTTATCTAAATTGCAATATAGCT  150

seq1  TATTCCAGTTTGCCTCTGTTTGTGTTTTCAAAGTAAACAACAAAGAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAGTTTGCCTCTGTTTGTGTTTTCAAAGTAAACAACAAAGAAACA  200

seq1  GAGCCTTTTCTGGATTATTAATTATTTTAGGAATCCAGCATATAAACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTTTCTGGATTATTAATTATTTTAGGAATCCAGCATATAAACTTG  250

seq1  AACTTGGCTATGGTGGAGGGATAAGAAAAGATCAATAAAGCTTAATGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGCTATGGTGGAGGGATAAGAAAAGATCAATAAAGCTTAATGAAT  300

seq1  AATTGGCAGAAATAAATTGCTTCATTTTGTGTTGTTTGTATAAGCACCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCAGAAATAAATTGCTTCATTTTGTGTTGTTTGTATAAGCACCGA  350

seq1  CACACACTATCCCATGGGAATTTTAAAAAGTGAAAAAAAAAGCAAAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTATCCCATGGGAATTTTAAAAAGTGAAAAAAAAAGCAAAAAGC  400

seq1  TAAACAGTATTCTAATTGGAAACAGAGAATGAAAGGACACAGAAATTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGTATTCTAATTGGAAACAGAGAATGAAAGGACACAGAAATTGGC  450

seq1  ACTGTATAAGGAAGGAGGGAAGAAATGTTGAAAAGCAGGCAGAAAGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATAAGGAAGGAGGGAAGAAATGTTGAAAAGCAGGCAGAAAGGGAG  500

seq1  TGTTTTCATTGTTTGACCAATTCTTCATCGTTGCCATGGCCCCCGAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCATTGTTTGACCAATTCTTCATCGTTGCCATGGCCCCCGAATGT  550

seq1  GGTGAGTAGTAGATCATACACAGCACAAGCCTAGTTCAGAGATACTAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTAGTAGATCATACACAGCACAAGCCTAGTTCAGAGATACTAAAG  600

seq1  CACAGGAGAAATGATGACAACTGCGTGTTTCATCTGTGACATGTGATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAGAAATGATGACAACTGCGTGTTTCATCTGTGACATGTGATAAA  650

seq1  CAAGCCTCTCTAAAATCCATGACAAAGCTATAGATTTTAACATAGAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTCTCTAAAATCCATGACAAAGCTATAGATTTTAACATAGAATTA  700

seq1  TCCGTTTAAGAAAATGAACAAAAGAATCAATGTACACACACCTGTGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTTTAAGAAAATGAACAAAAGAATCAATGTACACACACCTGTGAGGT  750

seq1  GATTATTAAACCAATTACATTTTCTTTAACAAAAAATACTTTCACAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTAAACCAATTACATTTTCTTTAACAAAAAATACTTTCACAGAAG  800

seq1  TAATTTTTCTACAAATGATGGGTTTGGTTAAAAACAAAATTAAATTTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTCTACAAATGATGGGTTTGGTTAAAAACAAAATTAAATTTACT  850

seq1  CTGTTTATAAAAGACAAGTTTATATACATTTTCACTGTAATATTTCACAA  900
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTATAAAGACAAGTTTATATACATTTTCACTGTAATATTTCACAA  900

seq1  GCATATTGTTACTTAAATTAATTTAATAAGACAGCAGTTGGCTT-GGATG  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCATATTGTTACTTAAATTAATTTAATAAGACAGCAGTTGGCTTGGGATG  950

seq1  CTATTTCAACAATAGCCTAGTAATGGTAACT-GTTGTTCCATCATCCAAT  998
      |||||||||| |||||||||||||||||||| ||||||||||||||||||
seq2  CTATTTCAAC-ATAGCCTAGTAATGGTAACTGGTTGTTCCATCATCCAAT  999

seq1  TTATT-GTGATCACCACAATAGTGTCAC-AAAATAGCTA-TTTCCATGTT  1045
      ||||| ||||||||||||| |||||||| |||||||||| |||||||| |
seq2  TTATTGGTGATCACCACAAAAGTGTCACAAAAATAGCTATTTTCCATGGT  1049

seq1  AAAACATTGT--CTTTCCCT-GGATTTTATTGCTTTGATGAAGCGT-CAT  1091
      |||| |||||  |||||||| |||||||||||||| ||||||| ||  ||
seq2  AAAA-ATTGTTCCTTTCCCTGGGATTTTATTGCTTGGATGAAGGGTGTAT  1098

seq1  -GACCTAAAAGC  1102
       |||||||||||
seq2  GGACCTAAAAGC  1110