BAC Information

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BAC

Clone NameB6Ng01-100O10
Chromosome8 (Build37)
Map Location 95,884,892 - 95,885,941
singlet/doubletsinglet
Overlap gene2310039D24Rik
Upstream geneIrx5, Irx6, LOC100041325, Mmp2, Aytl1, Capns2, LOC100040752, Slc6a2, EG244595, LOC382044, Es1, LOC676523, Ces3, Es22, AU018778, Ces1
Downstream geneCes7, Gnao1, Amfr, Nudt21, Ogfod1, Bbs2, Mt4, Mt3, Mt2, Mt1, Nup93, LOC100041555, Slc12a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100O10.bB6Ng01-100O10.g
ACCDH910261DH910262
length1,0741,051
definitionDH910261|Mus musculus domesticus DNA, BAC clone: B6Ng01-100O10, 5' end.DH910262|Mus musculus domesticus DNA, BAC clone: B6Ng01-100O10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctttgtgaatgtgttacctcactcaggatgatgccctccaggtc
catccatttggctaggaatttcataaattcattctttttaatagctgagt
agtactccattgtgtagatgtaccacattttctgtatccattcctctgtt
gaggggcatctgggttctttccagcttctggctattataaataaggctgc
tatgaacatagtggagcatgtgtccttcttaccagttggggcatcttctg
gatatatgcccaggagaggtattgctggatcctccggtagtactatgtcc
aattttctgaggaaccgccagacggatttccagagtggttgtacaagcct
acaatcccaccaacaatggaggagtgttcctctttctccacatcctcgcc
agcatctgctgtcacctgaatttttgatcttagccattctgactggtgtg
aggtggaatctcagggttgttttgatttgcatttccctgatgattaagga
tgttgaacattttttcaggtgcttctctgccattcggtattcctcaggtg
agaattctttgttcagttctgagccccattttttaatggggttatttgat
tttctgaagtccaccttcttgagttctttatataggttggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggtc
tctttgtcttattgatggtgtcttttgccttgcagaaactttggagtttc
attaggtcccatttgtcaattctcgatcttacagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaggacttttcccca
ctttctcctctatagtttcagtgtctctggttttatgtgaaggtctttga
tcatttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacatgataacaaccagttgtgccagcacccattgttgaaaatg
ctgtcttcttcactggatgggttttagcttccttgtcgaagaatcaaggg
accaaaggtgggggggtccatttc
gaattctctaagatagacagaccccttgtttattttgctgctatatccca
gctcaaaatcatatcctgccacaaaatgaaatggacagaagtgtaagata
ctgcataactaatttccccagatgctggtcactgttgggagaagtagtgc
aataggtggccctgttgaagtttccatggtaaaagatactgtgtgatgtc
ctcaggattgacaccacaggctcctccctacaaacctcctgagtctcttt
tccctctgagagggttttggtactcaaaaatggctccctagacctttagc
cattaatctcagtcttctgatagtgaaaagttctagtgttgtcttttttc
acagggtctttttttttttttgagcaagaaattcaaatgagaaatagata
gagaattcctgagttgtgcactgagctggcagtcaggagagcagagccag
tcacacctctattctccttggctgtgttaactatcaagtgacttttctgc
tctgcacctcaacagcacacacaagacattagtatgggaattctaccaac
tgtagacaattgaagattatcactccaaggttgaaaatcttaaaatatcc
ttacctttttggtattttcttgtgcatcaagcttaaaaaggttctgtgga
aacaaaggcagattatggtggtcaaccttcctggtataaaatctgaccat
ttgggctgtgctcctagttcctctgcggctgacataagagaaccctacat
tctgtgctttctgtatgatacaagatgagcaagacgaggggagggggcgg
cagcaggaagtcaacaggtcctgggtcccgaaagctctgggagaatgcct
gcttgtctataccctgaatcttccttcaccaatcccacttagagatcctc
cttgggcaacaacctccctcgttttcctgtaggaaaaaaattgtagcgga
gatgcagcagcatcagtggaggtttacctgggtgtggggaacctagcaga
gcaggatgagccttctattcccttcccaatcctctacttcctatcataaa
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_95884892_95885941
seq2: B6Ng01-100O10.g_73_1123

seq1  GAATTCTCTAAGATAGACAGACCCCTTGTTTATTTTGCTGCTATATCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAAGATAGACAGACCCCTTGTTTATTTTGCTGCTATATCCCA  50

seq1  GCTCAAAATCATATCCTGCCACAAAATGAAATGGACAGAAGTGTAAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAATCATATCCTGCCACAAAATGAAATGGACAGAAGTGTAAGATA  100

seq1  CTGCATAACTAATTTCCCCAGATGCTGGTCACTGTTGGGAGAAGTAGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATAACTAATTTCCCCAGATGCTGGTCACTGTTGGGAGAAGTAGTGC  150

seq1  AATAGGTGGCCCTGTTGAAGTTTCCATGGTAAAAGATACTGTGTGATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTGGCCCTGTTGAAGTTTCCATGGTAAAAGATACTGTGTGATGTC  200

seq1  CTCAGGATTGACACCACAGGCTCCTCCCTACAAACCTCCTGAGTCTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGATTGACACCACAGGCTCCTCCCTACAAACCTCCTGAGTCTCTTT  250

seq1  TCCCTCTGAGAGGGTTTTGGTACTCAAAAATGGCTCCCTAGACCTTTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTGAGAGGGTTTTGGTACTCAAAAATGGCTCCCTAGACCTTTAGC  300

seq1  CATTAATCTCAGTCTTCTGATAGTGAAAAGTTCTAGTGTTGTCTTTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATCTCAGTCTTCTGATAGTGAAAAGTTCTAGTGTTGTCTTTTTTC  350

seq1  ACAGGGTCTTTTTTTTTTTTTGAGCAAGAAATTCAAATGAGAAATAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTCTTTTTTTTTTTTTGAGCAAGAAATTCAAATGAGAAATAGATA  400

seq1  GAGAATTCCTGAGTTGTGCACTGAGCTGGCAGTCAGGAGAGCAGAGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCCTGAGTTGTGCACTGAGCTGGCAGTCAGGAGAGCAGAGCCAG  450

seq1  TCACACCTCTATTCTCCTTGGCTGTGTTAACTATCAAGTGACTTTTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACCTCTATTCTCCTTGGCTGTGTTAACTATCAAGTGACTTTTCTGC  500

seq1  TCTGCACCTCAACAGCACACACAAGACATTAGTATGGGAATTCTACCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACCTCAACAGCACACACAAGACATTAGTATGGGAATTCTACCAAC  550

seq1  TGTAGACAATTGAAGATTATCACTCCAAGGTTGAAAATCTTAAAATATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACAATTGAAGATTATCACTCCAAGGTTGAAAATCTTAAAATATCC  600

seq1  TTACCTTTTTGGTATTTTCTTGTGCATCAAGCTTAAAAAGGTTCTGTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTTTTGGTATTTTCTTGTGCATCAAGCTTAAAAAGGTTCTGTGGA  650

seq1  AACAAAGGCAGATTATGGTGGTCAACCTTCCTGGTATAAAATCTGACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGCAGATTATGGTGGTCAACCTTCCTGGTATAAAATCTGACCAT  700

seq1  TTGGGCTGTGCTCCTAGTTCCTCTGCGGCTGACATAAGAGAACCCTACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTGTGCTCCTAGTTCCTCTGCGGCTGACATAAGAGAACCCTACAT  750

seq1  TCTGTGCTTTCTGTATGATACAAGATGAAGCAAGACGAGGG--AGGGGCG  798
      ||||||||||||||||||||||||||| |||||||||||||   ||||||
seq2  TCTGTGCTTTCTGTATGATACAAGATG-AGCAAGACGAGGGGAGGGGGCG  799

seq1  GCAGCAGGAAGTCAACAGGTCCTGGGTCCCAGAAGCTCTGGGTAGAATGT  848
      ||||||||||||||||||||||||||||||  |||||||||| |||||| 
seq2  GCAGCAGGAAGTCAACAGGTCCTGGGTCCCGAAAGCTCTGGG-AGAATGC  848

seq1  CTGCTTGTCTATA-CCTGAATCTTCCCTCAACCATCCCACTAAGAGATCC  897
      ||||||||||||| |||||||||||| ||| | |||||||| ||||||||
seq2  CTGCTTGTCTATACCCTGAATCTTCCTTCACCAATCCCACTTAGAGATCC  898

seq1  TCCTT-GGCAACAA-CTCCCCAGTTTTCCTGTAGGAAAAAAA-TGTAGCG  944
      ||||| |||||||| |||||  |||||||||||||||||||| |||||||
seq2  TCCTTGGGCAACAACCTCCCTCGTTTTCCTGTAGGAAAAAAATTGTAGCG  948

seq1  AAGATGCAGCAGCATCAAGTGGAGGTTTAGCTGGGTGTGGTGCAAACTAG  994
       ||||||||||||||| |||||||||||| |||||||||| | || ||||
seq2  GAGATGCAGCAGCATC-AGTGGAGGTTTACCTGGGTGTGG-GGAACCTAG  996

seq1  CAGAGCAGGATGAGCCTTCTATTCCTTTCCCAATCCTCTACTTTCATATC  1044
      ||||||||||||||||||||||||| ||||||||||||||| ||| ||||
seq2  CAGAGCAGGATGAGCCTTCTATTCCCTTCCCAATCCTCTAC-TTCCTATC  1045

seq1  ATAAAC  1050
      ||||||
seq2  ATAAAC  1051