BAC Information

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BAC

Clone NameB6Ng01-101D21
Chromosome8 (Build37)
Map Location 5,770,954 - 5,771,638
singlet/doubletsinglet
Overlap genenone
Upstream geneShcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275, LOC623409, LOC669429
Downstream geneLOC100040360
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101D21.bB6Ng01-101D21.g
ACCDH910493DH910494
length7121,178
definitionDH910493|Mus musculus domesticus DNA, BAC clone: B6Ng01-101D21, 5' end.DH910494|Mus musculus domesticus DNA, BAC clone: B6Ng01-101D21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taattttttaaaattttataatttttttgtttacactgtttaccattatc
ttaaatcaagtatatgactattaagccaatggaaatgaaggttaatgcta
tccaatgtgagttgtgttaatttatacctgtatttataatctcaggatga
agtcagattatattgactgttattcattctgagttcagctacaaaggaga
cctaactatggaggttcatgctttatgacaaaagtcagggccaaatggta
tcatagtaaatgtgatgaaaaattcagagttgtttaaatggaaaaatgaa
acagaattatgaaagagttggataacaagtggcccattggtataaattca
gtatgtttattttgtgattaacaatttagttttgcaaagccaagccaaaa
catgtataattacattaaatttgttagttggatgttagtgactttatctt
gaacccatatctaatttataaagtatttttggatttatagttatttcttt
atttggagattcgacatggttttgttttgtaaatgttgtcataaaagggc
acaaataattgaagctgatgtagagatactattgtatttatactcatagt
tttcttcataagaatttatatttaatttaaatgtggaaaagacaatccat
aaattaagaacaagagattttatcatgtttttgatacagtgtcacatgta
gtgcagactagt
gaattctcacctgaggaataccgaatggctgagaagtacctgaaaaaatg
ctcagcatccttaatcatcagggaaatgaaaatcaaaacaaccctgagat
tccatctcaaaatggctaagatcaaaaattcaggtgacagcagatgctgg
agaggatgtggagaaagaggaacactcctccatttttggtgggattgcaa
gcttgtacaaccactctggaaatcagtctggcagttcttcagaaaattgg
acatagtactactggaggatcctgcaatacctctcctgggcatatatcca
gaagatgtcccaaccggttaagaaggacacatgctccactatgttcatag
tggccttatttataatagccagaagctggaaataacccagatgcccctca
acagaggaatggatacaaaaaatgtggtacgtttaaacaacggtgtacta
ctcagctattaaaaggaatgaatttatgtaattcctaggcaaatgtttgg
acctggagggcatcatcctgagtgaggtaacacaatcacaaaagaactca
aataatatgtactcactgataagtggatattagcccagaaacttagtata
cctgagatataagagacaatttgtaaaacacatgaaactgaagaagaacg
aagatcaaagtgtggacactttcgccttcttagaattggaaacaatcact
catggaaggagttacagagacaaagtttggagctgagacaaaaggatgga
ccatctagagactgccatatccagggatccatcccataattagcctccaa
atgatgacaccattgcatacactagcaagcgtttgctgaaaggaccctga
tatagctctctcttgtgagactatgccggggccctagcaaacacataagt
ggatcctcacagtcagctagtggatggatcacaggcccgcaatggaggag
ctagagaaagtatccaaggagctaagagatctgcaatcctgtagtacaac
attatgaactaccagtaccctgagcttctgattctagctgcatagcatca
aagatggctagtaagccatcactgggaagagaggccattgacacgcaaac
tttatatgccctagtacggactgctctcagtggtctaaaagtgtgtatgg
gttggccagaggatgtggtgggagggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_5770954_5771638
seq2: B6Ng01-101D21.b_28_712 (reverse)

seq1  ACTAGTCTGCACTACATGTGACACTGTATCAAAAACATGATAAAATCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTCTGCACTACATGTGACACTGTATCAAAAACATGATAAAATCTCT  50

seq1  TGTTCTTAA-TTATGGATTGTCTTTTCCACATTTAAATTAAAATATAAAT  99
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  TGTTCTTAATTTATGGATTGTCTTTTCCACATTTAAATT-AAATATAAAT  99

seq1  TCTTAATGAAGAAAACTATGAGTATAAATACAATAGTATCTCTACATCAG  149
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTT-ATGAAGAAAACTATGAGTATAAATACAATAGTATCTCTACATCAG  148

seq1  CTTCAATTATTTGTGCCCTTTTATGACAACATTTAC-AAACAAAACCATG  198
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTCAATTATTTGTGCCCTTTTATGACAACATTTACAAAACAAAACCATG  198

seq1  TCGAATCTCCAAATAAAGAAATAACTATAAATCCAAAAATACTTTATAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATCTCCAAATAAAGAAATAACTATAAATCCAAAAATACTTTATAAA  248

seq1  TTAGATATGGGTTCAAGATAAAGTCACTAACATCCAACTAACAAATTTAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATATGGGTTCAAGATAAAGTCACTAACATCCAACTAACAAATTTAA  298

seq1  TGTAATTATACATGTTTTGGCTTGGCTTTGCAAAACTAAATTGTTAATCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTATACATGTTTTGGCTTGGCTTTGCAAAACTAAATTGTTAATCA  348

seq1  CAAAATAAACATACTGAATTTATACCAATGGGCCACTTGTTATCCAACTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAACATACTGAATTTATACCAATGGGCCACTTGTTATCCAACTC  398

seq1  TTTCATAATTCTGTTTCATTTTTCCATTTAAACAACTCTGAATTTTTCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAATTCTGTTTCATTTTTCCATTTAAACAACTCTGAATTTTTCAT  448

seq1  CACATTTACTATGATACCATTTGGCCCTGACTTTTGTCATAAAGCATGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTACTATGATACCATTTGGCCCTGACTTTTGTCATAAAGCATGAA  498

seq1  CCTCCATAGTTAGGTCTCCTTTGTAGCTGAACTCAGAATGAATAACAGTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATAGTTAGGTCTCCTTTGTAGCTGAACTCAGAATGAATAACAGTC  548

seq1  AATATAATCTGACTTCATCCTGAGATTATAAATACAGGTATAAATTAACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATCTGACTTCATCCTGAGATTATAAATACAGGTATAAATTAACA  598

seq1  CAACTCACATTGGATAGCATTAACCTTCATTTCCATTGGCTTAATAGTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCACATTGGATAGCATTAACCTTCATTTCCATTGGCTTAATAGTCA  648

seq1  TATACTTGATTTAAGATAATGGTAAACAGTGAAAACA  685
      ||||||||||||||||||||||||||||||| |||||
seq2  TATACTTGATTTAAGATAATGGTAAACAGTGTAAACA  685