BAC Information

Click to search

BAC

Clone NameB6Ng01-102C12
Chromosome8 (Build37)
Map Location 84,113,594 - 84,270,786
singlet/doubletdoublet
Overlap geneInpp4b
Upstream geneFrem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
Downstream geneLOC671182, Il15, EG666564
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102C12.bB6Ng01-102C12.g
ACCDH911128DH911129
length6801,147
definitionDH911128|Mus musculus domesticus DNA, BAC clone: B6Ng01-102C12, 5' end.DH911129|Mus musculus domesticus DNA, BAC clone: B6Ng01-102C12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,270,107 - 84,270,786)(84,113,594 - 84,114,742)
sequence
gaattcaaagaccatgtgaaaactagacttgctgtttttctctttgcatt
tcgtttgatacctaatgacttaaattataacatacatcatctgcatatga
attaaacatgcattgcttcttaaagttcgatttagttttatttatgtatt
tcatcatattgcctgtgtaaatatctgtgcctgtgttcattgagtgtcta
cagattcctgaggagggtaacatcctctggtactggagttatagatagtt
gttagttggtacgcatgagctgggaactgaaatccaggtctcctgcaaga
acagtgggagcatttaacccccgaaccatctctccatccccccatctgct
tttctttattctggcctcattgtatagtctttgatgacctagaactcgct
atatagacaagtccttgatagagttctgcctgtcttttccttatgtactg
agatttaagatatgggccaccattctcagtagtaaaatcctattttgaag
aagcaatttattgactcaagataatagagaagtagcaacaaacatttaag
catacttggaaaataaaattcaacagtgtgtagacttttctgttaaacct
tttccacaatttgtcttcaagaaggacatatgcccaggtgctcctgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcatttttgtggcacagggttatatatgtcacaactctaccacttt
gggtttcatgctagctttgtgaaaagatgtttatagaaactggtattaga
ttgaaacaaataatgtcagctagtggcagttacgtttattgagtttttcc
aatatgattcttctgacctaacccttttatgctcatctcccatctaattc
caacaatggttctgtgagttatctcttctattgcttccatgttattgatg
aggactgtgggggctgagaagtgtttttatttctgtttttattatttaca
gtagaccttttaaagtttatagcagcaataaaaatacatcagaaaagcag
tcagatatggtaggaaaagttgatggttggtataaaacactagttctgtg
agtttgtcttggtcaactcacaacccatccagggcctcagttttctcaag
ttaatatagaatgtgtttgagaaatgctctgcagttttaaagaaaaagta
aaattctagtaaattttttcttgcatacatatgctggtggtttctatcac
tagaaattctttgctgtagttggataagtgtttccagaagcctacagtat
aaagacttggtgaggaataattggaactaccaggtaatagtggaactttt
aaaaggcagagtccattgttaagaacttaagccattcaggatacttcttt
ttgaagggagtgtcattggactcagcccctcctttctttcacaatccttg
gtcaccataggataattaatttcttctgctacatgatccaaacatccaac
tcatctaggccctcaaacacccaactaatcatagaggccaatcctccccc
aaactgtgagtccaaacaatgccatttctcttttatgtaagcatctcaca
catttactacagtaacagaaatctgattaagtaattatttatttttttcc
tttctatttccccttttatttgaactctgaccatgactatactgcattat
gaagcaatggaacttaagggcgtactgatgaaatagcggttagacctccg
tgggaaacaccggttcatggaagttcctctttgtattggaatatattagc
ctgaatgttggtcatcaagggctcttcttgggatagtttgagacccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_84270107_84270786
seq2: B6Ng01-102C12.b_45_724 (reverse)

seq1  CACACACACACACACACACACACACACACACACACAGGAGCACCTGGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACAGGAGCACCTGGGCA  50

seq1  TATGTCCTTCTTGAAGACAAATTGTGGAAAAGGTTTAACAGAAAAGTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTTCTTGAAGACAAATTGTGGAAAAGGTTTAACAGAAAAGTCTA  100

seq1  CACACTGTTGAATTTTATTTTCCAAGTATGCTTAAATGTTTGTTGCTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTTGAATTTTATTTTCCAAGTATGCTTAAATGTTTGTTGCTACT  150

seq1  TCTCTATTATCTTGAGTCAATAAATTGCTTCTTCAAAATAGGATTTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATTATCTTGAGTCAATAAATTGCTTCTTCAAAATAGGATTTTACT  200

seq1  ACTGAGAATGGTGGCCCATATCTTAAATCTCAGTACATAAGGAAAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAATGGTGGCCCATATCTTAAATCTCAGTACATAAGGAAAAGACA  250

seq1  GGCAGAACTCTATCAAGGACTTGTCTATATAGCGAGTTCTAGGTCATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAACTCTATCAAGGACTTGTCTATATAGCGAGTTCTAGGTCATCAA  300

seq1  AGACTATACAATGAGGCCAGAATAAAGAAAAGCAGATGGGGGGATGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATACAATGAGGCCAGAATAAAGAAAAGCAGATGGGGGGATGGAGA  350

seq1  GATGGTTCGGGGGTTAAATGCTCCCACTGTTCTTGCAGGAGACCTGGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTCGGGGGTTAAATGCTCCCACTGTTCTTGCAGGAGACCTGGATT  400

seq1  TCAGTTCCCAGCTCATGCGTACCAACTAACAACTATCTATAACTCCAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCCCAGCTCATGCGTACCAACTAACAACTATCTATAACTCCAGTA  450

seq1  CCAGAGGATGTTACCCTCCTCAGGAATCTGTAGACACTCAATGAACACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGATGTTACCCTCCTCAGGAATCTGTAGACACTCAATGAACACAG  500

seq1  GCACAGATATTTACACAGGCAATATGATGAAATACATAAATAAAACTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGATATTTACACAGGCAATATGATGAAATACATAAATAAAACTAAA  550

seq1  TCGAACTTTAAGAAGCAATGCATGTTTAATTCATATGCAGATGATGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACTTTAAGAAGCAATGCATGTTTAATTCATATGCAGATGATGTATG  600

seq1  TTATAATTTAAGTCATTAGGTATCAAACGAAATGCAAAGAGAAAAACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTTAAGTCATTAGGTATCAAACGAAATGCAAAGAGAAAAACAGC  650

seq1  AAGTCTAGTTTTCACATGGTCTTTGAATTC  680
      ||||||||||||||||||||||||||||||
seq2  AAGTCTAGTTTTCACATGGTCTTTGAATTC  680

seq1: chr8_84113594_84114742
seq2: B6Ng01-102C12.g_68_1214

seq1  GAATTCATTTTTGTGGCACAGGGTTATATATGTCACAACTCTACCACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTTGTGGCACAGGGTTATATATGTCACAACTCTACCACTTT  50

seq1  GGGTTTCATGCTAGCTTTGTGAAAAGATGTTTATAGAAACTGGTATTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCATGCTAGCTTTGTGAAAAGATGTTTATAGAAACTGGTATTAGA  100

seq1  TTGAAACAAATAATGTCAGCTAGTGGCAGTTACGTTTATTGAGTTTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACAAATAATGTCAGCTAGTGGCAGTTACGTTTATTGAGTTTTTCC  150

seq1  AATATGATTCTTCTGACCTAACCCTTTTATGCTCATCTCCCATCTAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATTCTTCTGACCTAACCCTTTTATGCTCATCTCCCATCTAATTC  200

seq1  CAACAATGGTTCTGTGAGTTATCTCTTCTATTGCTTCCATGTTATTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATGGTTCTGTGAGTTATCTCTTCTATTGCTTCCATGTTATTGATG  250

seq1  AGGACTGTGGGGGCTGAGAAGTGTTTTTATTTCTGTTTTTATTATTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGTGGGGGCTGAGAAGTGTTTTTATTTCTGTTTTTATTATTTACA  300

seq1  GTAGACCTTTTAAAGTTTATAGCAGCAATAAAAATACATCAGAAAAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCTTTTAAAGTTTATAGCAGCAATAAAAATACATCAGAAAAGCAG  350

seq1  TCAGATATGGTAGGAAAAGTTGATGGTTGGTATAAAACACTAGTTCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATATGGTAGGAAAAGTTGATGGTTGGTATAAAACACTAGTTCTGTG  400

seq1  AGTTTGTCTTGGTCAACTCACAACCCATCCAGGGCCTCAGTTTTCTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTCTTGGTCAACTCACAACCCATCCAGGGCCTCAGTTTTCTCAAG  450

seq1  TTAATATAGAATGTGTTTGAGAAATGCTCTGCAGTTTTAAAGAAAAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATAGAATGTGTTTGAGAAATGCTCTGCAGTTTTAAAGAAAAAGTA  500

seq1  AAATTCTAGTAAATTTTTTCTTGCATACATATGCTGGTGGTTTCTATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTAGTAAATTTTTTCTTGCATACATATGCTGGTGGTTTCTATCAC  550

seq1  TAGAAATTCTTTGCTGTAGTTGGATAAGTGTTTCCAGAAGCCTACAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTCTTTGCTGTAGTTGGATAAGTGTTTCCAGAAGCCTACAGTAT  600

seq1  AAAGACTTGGTGAGGAATAATTGGAACTACCAGGTAATAGTGGAACTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTTGGTGAGGAATAATTGGAACTACCAGGTAATAGTGGAACTTTT  650

seq1  AAAAGGCAGAGTCCATTGTTAAGAACTTAAGCCATTCAGGATACTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCAGAGTCCATTGTTAAGAACTTAAGCCATTCAGGATACTTCTTT  700

seq1  TTGAAGGGAGTGTCATTGGACTCAGCCCCTCCTTTCTTTCACAATCCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGGAGTGTCATTGGACTCAGCCCCTCCTTTCTTTCACAATCCTTG  750

seq1  GTCACCATAGGATAATTAATTTCTTCTGCTACATGATCCAAACATCCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCATAGGATAATTAATTTCTTCTGCTACATGATCCAAACATCCAAC  800

seq1  TCATCTAGGCCCTCAAACACCCAACTAATCATAGAGGCCAATCCTCCCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAGGCCCTCAAACACCCAACTAATCATAGAGGCCAATCCTCCCCC  850

seq1  AAACTGTGAGTCCAAACAATGCCATTTCTCTTTTATGTTAAGCATCTCAC  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAACTGTGAGTCCAAACAATGCCATTTCTCTTTTATG-TAAGCATCTCAC  899

seq1  ACATTTACTACAGTAACAGAAATCTGATTAAGTAATTATTTTATTTTTTT  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACATTTACTACAGTAACAGAAATCTGATTAAGTAATTA-TTTATTTTTTT  948

seq1  CCTTTCTATTTCCCCCTTTTATTTGAACTCTGACCATGACTATACTGCAT  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTATTT-CCCCTTTTATTTGAACTCTGACCATGACTATACTGCAT  997

seq1  TATGAAGCAAATGGAACTTAAGGGCGTACTGATGAAAATAGCGGTTAGAC  1050
      |||||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  TATGAAGC-AATGGAACTTAAGGGCGTACTGATG-AAATAGCGGTTAGAC  1045

seq1  CTCCGTGGGAAACA-CGGTCCATGGAAGTTCCTC-TTGTATT-GAATATT  1097
      |||||||||||||| |||| |||||||||||||| ||||||| ||||| |
seq2  CTCCGTGGGAAACACCGGTTCATGGAAGTTCCTCTTTGTATTGGAATA-T  1094

seq1  ATTAG-CTGAATGTTGTGTCATTCAGTGCTCTTCTT-GGATAGTTTGAGA  1145
      ||||| |||||||||| |||||  || ||||||||| |||||||||||||
seq2  ATTAGCCTGAATGTTG-GTCATCAAGGGCTCTTCTTGGGATAGTTTGAGA  1143

seq1  CCCC  1149
      ||||
seq2  CCCC  1147