BAC Information

Click to search

BAC

Clone NameB6Ng01-103I05
Chromosome8 (Build37)
Map Location 55,028,436 - 55,029,195
singlet/doubletsinglet
Overlap genenone
Upstream geneAga, Neil3, LOC100040107
Downstream geneVegfc, Spcs3, Asb5, Spata4, Wdr17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103I05.bB6Ng01-103I05.g
ACCDH912081DH912082
length1,1021,188
definitionDH912081|Mus musculus domesticus DNA, BAC clone: B6Ng01-103I05, 5' end.DH912082|Mus musculus domesticus DNA, BAC clone: B6Ng01-103I05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcatgcttttggtcttctctagtttctgcaaggcaaaagacac
cgtcaataagacaaaaagaccaccaacagattgggaaaggatctttacct
atcctaaatcagataggggactaatatccaacatatataaagaactcaag
aaggtggacttcagaaaatcaaataaccccattaaaaaatggggctcaga
actgaacaaagaattctcacctgaggaataccgaatggcagagaagcact
tgaaaaaatgttcaacatccttaatcatcagggaaatgcaaatcaaaaca
accctgagattccacctcacaccagtcagaatggctaagatcaaaaattc
aggtgacagcagatgctggtgaggatgtggagaaagaggaacactcctcc
attgttggtgggagtgcaggcttgtacaaccactctggaaatcagtctgg
cggttcctcagaaaactggacatagtactaccggaggatccagcaatacc
tctcctgggcatatatccagaagatgccccaacaggtaagaaggacacat
gctccactatgttcatagcagccttatttataatagccagaagctggaaa
gaacctagatgcccctcaacagaggaatggatacagaaaatgtggtacat
ctacacaatggagtactactcagctattaaaaagaatgaatttatgaaat
tcctagccaaatggatggacctggagggcatcatcctgagtgaggtaaca
cattcacaaagaaactcacacaatatgtattcactgataagtggatatta
gccccaaacctaggatacccaagatataagatataatttgcttttctcca
tatatatcattgtgatttgctcaataggaccacacctcataaccctcaag
gtctttcatccccctcccagtagtctgcttccattttgatctcgcttcca
catggagaggaaagctctcaatatttcttctttcatacttcttctcacaa
actcctctatcttctttctctttaggattcaaactctatatatctcttta
ctttcatatcatatggaaatatatgacatggatatatggatatatggtgg
at
gaattctcacctgaggaatactgaatgcctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcagatcaaaacaaccctgagat
tccatctcacaccagtcagaatggataaattaaaaaattcaggtaacagc
agatgctggcgaggatgtggagaaagaggaatactcctccactgttgttg
ggattgcaagcttgtacaaccactctggaaatcaatctggaggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtaaatgtggtacatt
tacacaatggtgtactactcagctattaaaaagaatgaatttatgaaatt
aattcctaggcaaatggttggacctggagggcatcatcctgagtgaggta
acctaatcacaaaagaattcacatgatatgtacttactgataagtggata
ttagcccagaaacttagaatacccaagatataagatacaatttgtgaaac
acatgaaactgaagaagaacgaagaccaaagtgtggacactttgcccctt
cttagaattgggaacaaaacacccatggaaggagttacagagacaaagtt
tggagctgagacaaaaggatagaccatctagagactgctatatccaggga
tccatcccataatcagcctccaaatgctgacaccactgcatacactagca
agattttgctgaaaggaccctgatatagctgtctcttgtgagtctatgct
aaggcctagcaaacacagaagtggatgctcacagccagctatgaatggat
tacagggcctccaatgaggagctagagaaagtacccaagagctaaaggga
tctgcaccctaaagtagaacacatatgactaccagtaccctgtagctctt
gttcctagctgcatttgtatcaaaagatgacctagtcagccatcactgga
atgaggcctattggtcatgctaacttttaatgccccagtacagggaacca
aggccaaaagtgtgtgaattggttgtggttaggggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_55028436_55029195
seq2: B6Ng01-103I05.b_395_1152

seq1  AAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACAC  50

seq1  TCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCA  100

seq1  GTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGC  150

seq1  AATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGG  200

seq1  ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC  250

seq1  TGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG  300

seq1  GTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTA  350

seq1  TGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAG  400

seq1  GTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAGTGG  450

seq1  ATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTTT  500

seq1  TCTCCATATATATCATTGTGATTTGCTCAATAGGACCACACCTCATAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATATATATCATTGTGATTTGCTCAATAGGACCACACCTCATAACC  550

seq1  CTCAAGGTCTTTCATCCCCCTCCCAGTAGTCTGCTTCCATTTTGATCTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGTCTTTCATCCCCCTCCCAGTAGTCTGCTTCCATTTTGATCTCG  600

seq1  CTTCCACAT-GAGA-GAAAGCTCTCAATATTTC-TCTTTCATACTTCTTC  647
      ||||||||| |||| |||||||||||||||||| ||||||||||||||||
seq2  CTTCCACATGGAGAGGAAAGCTCTCAATATTTCTTCTTTCATACTTCTTC  650

seq1  TCACAAACTCCTCTATCTTCTTTCTCCTTTAGATTCCAAACTCCTATATA  697
      ||||||||||||||||||||||||| ||||||  | |||||| |||||||
seq2  TCACAAACTCCTCTATCTTCTTTCT-CTTTAGGATTCAAACT-CTATATA  698

seq1  ATCCTTCT-TTTACTTTCATATCATATGGATATATATGACATGGATATAT  746
           ||| ||||||||||||||||||||| |||||||||||||||||||
seq2  -----TCTCTTTACTTTCATATCATATGGAAATATATGACATGGATATAT  743

seq1  GGATATAT-GTGGAT  760
      |||||||| ||||||
seq2  GGATATATGGTGGAT  758