BAC Information

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BAC

Clone NameB6Ng01-104L19
Chromosome8 (Build37)
Map Location 72,895,981 - 73,064,819
singlet/doubletdoublet
Overlap geneComp, Crtc1, Klhl26, Tmem59l, Crlf1, 2810428I15Rik, Uba52, Fkbp8, Ell
Upstream geneLOC670593, EG665578, LOC622336, LOC100041482, LOC673968, AI449175, EG636741, 1200003I07Rik, D330038O06Rik, Atp13a1, Gmip, Edg4, Pbx4, Cilp2, BC028663, Ndufa13, Tssk6, Gatad2a, LOC665649, 9130404D08Rik, Sf4, Tm6sf2, Hapln4, Ncan, Rfxank, 2310073E15Rik, 2310045N01Rik, Mef2b, Tmem161a, Slc25a42, Armc6, Sfrs14, Homer3, Ddx49, Cope, Lass1, Upf1
Downstream geneIsyna1, Ssbp4, Lrrc25, Gdf15, Pgpep1, Lsm4, Jund1, 2410018E23Rik, LOC100041434, Pde4c, Rab3a, BC051227, Ifi30, Pik3r2, LOC100041971, Mast3, Il12rb1, Arrdc2, Kcnn1, LOC100042011, Ccdc124, Slc5a5, Rpl18a, Snora68, Mtap1s, LOC100042057, LOC665858, LOC384645, LOC100041583, EG621377, 2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104L19.bB6Ng01-104L19.g
ACCDH912946DH912947
length1,0901,127
definitionDH912946|Mus musculus domesticus DNA, BAC clone: B6Ng01-104L19, 5' end.DH912947|Mus musculus domesticus DNA, BAC clone: B6Ng01-104L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,063,722 - 73,064,819)(72,895,981 - 72,897,138)
sequence
gaattctaaccaggaagagtggctgggctggtcactcagtggctgccacc
caaatcctcaccacctcttccttctcacctgcaggggcactttctgcccc
ttttgacaagggaagaaggactttttccaaagagattcaacctgttctag
gaaggaaaaaactaaaacccgggcacgggcaggaagtggctcaaagaagt
gaagggaagacatgcaggaagaggtaggctccccagatcactgaatgggg
aataaattcctggcttggccaatggtgcagcacatgtcctgggcaggaag
aaaaccacattctttcctagttactctctgttcactcgaccgcgtcaaca
ccccccgagccagcacaggcaaacacacatcccagacacagactcaacac
cccagtcactttagtaagatgaaccctcaagccacttcccctggggtcct
gcaacttctgtctcagtggatggatgcagggtgataccgtggcttgggtg
gggcatcaaggtgtgacccagagtgaggcacaggaaagagggacacagcc
aggatccctaaccccactcccaagccaggaggcagtaccaaaaagcctgg
aatttctcccagatgaagagtggaaaatggagagaccaagtgtggtggct
acagttgcctcctgctgagtgcccaggggaggaagcccccatggctaaca
caaccacctccgtcggtgagaaaaacacaacagccttgtccaaaatatcc
agggaaacagggttacaagagtggcaggatctggggccaggcagtaagtt
tctgtcaaactaccccttctatgagtggatccaaacacacctgtcatccc
agcacttaagaacctaaggcaggaggatggccgtcagttaaggacaacct
gagctacatagaaaggaccttatttttaaaaaagagacaagagtagagcc
aacctgagatgtcactggggctggtcagtatcgccaggtgttgaacgcgc
ggccttgtcccccacaggttcccgcaagtgtctcccacgcgcagctaccc
gccaggacgccgcaaagctcacctggtgggcccgtagctt
gaattccagcgctggtcagcaagaacagccccacacgtgtttggagccaa
agaaaacaggaggtagctcagccattgggacctggcctctcggaacacag
ccacctccagccttcctctgcagggctgtttgccctccgtccccctccac
cccctgcccccgtgagtccaaagacaacttgggcactgttcttggctagc
ctcactccctgattgtctttaagccccaggattttgccagcacactgtat
gtgtggtgttcatctatcaagaatcccaggctcattcctactgaggacta
ttgctcagcagttcccactagatccccaccacctctgggtaatagtgtaa
ccatttccagacccaccttggctgcctctgacagaggccggggactgctt
cctccagtgttccccagcagatacctagtaggagatatgacccacaacag
gcacatttgtgtaaaacatggatgtaccagaaatctacaagcacataccc
tccgtccgacatgctccaccaacttccacctctttccctgcccccaccac
tggagctaacccccctgcttcctatgactgatctttttattctctttgtt
ccctggactgtctgtctcccccaggcagccctccatggtttcttcttgga
gcaagagatcttcttgggttgcagcagccccaagtgggccagcccccctc
ccctgagcccagcttctctgtttacagatgtaagctgtgagtcctggaag
gccaggtggagagggttaaagctgaggtgttttacagctcagagtgtggc
tggcccgggaaagattttcagttcccagccagtcttatttttatgacagg
ctgtctccctggtggctggggaacaaagcttagtgcagtccagtgagaag
agaaccccagggaagctgaggttccttcctccaccccatccccagcacac
actgctctcaacagtgcaaaaggaagttgaggcaagacatcgtttattca
gaattctgttgttgagtgcggagtgcgagaacctccacttctgctgacct
ggctagttcaaccaaaagttctttttgcagactttgaagcgaaggatttg
ggactgatgtggtgtagttgggacctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_73063722_73064819
seq2: B6Ng01-104L19.b_44_1133 (reverse)

seq1  AAGCTACCGGGCCCACCAGGTGAGCTTTGCGGCGTCCTGGCGGGTAGGCT  50
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGCTA-CGGGCCCACCAGGTGAGCTTTGCGGCGTCCTGGCGGGTA-GCT  48

seq1  GCGCCGTGGGGAGACACTTGCGGGGACCTGTGGGGGACAAGGCCGCGCG-  99
      ||| ||| |||||||||||||||| |||||||||||||||||||||||| 
seq2  GCG-CGT-GGGAGACACTTGCGGGAACCTGTGGGGGACAAGGCCGCGCGT  96

seq1  TCCACACCTGGCGATACCTTGACCAGCCCCAGTGACATCCTTCAGGTTGG  149
      || ||||||||||||||  ||||||||||||||||||||  |||||||||
seq2  TCAACACCTGGCGATAC--TGACCAGCCCCAGTGACATC--TCAGGTTGG  142

seq1  CTCTACTCTTGTCTCTTTTTTTAAAAATAGGTCCTTTCTATGTAGCTCAG  199
      ||||||||||||||||||||| ||||  ||||||||||||||||||||||
seq2  CTCTACTCTTGTCTCTTTTTTAAAAATAAGGTCCTTTCTATGTAGCTCAG  192

seq1  GTTGTCCCTGAACTGACGGCCATCCTCCTGCCTTAGGTTCTTAAGTGCTG  249
      ||||| ||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTTGT-CCTTAACTGACGGCCATCCTCCTGCCTTAGGTTCTTAAGTGCTG  241

seq1  GGATGACAGGTGTGTTTGGATCCACTCATAGAAGGGGTAGTTTGACAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGACAGGTGTGTTTGGATCCACTCATAGAAGGGGTAGTTTGACAGAA  291

seq1  ACTTACTGCCTGGCCCCAGATCCTGCCACTCTTGTAACCCTGTTTCCCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTGCCTGGCCCCAGATCCTGCCACTCTTGTAACCCTGTTTCCCTG  341

seq1  GATATTTTGGACAAGGCTGTTGTGTTTTTCTCACCGACGGAGGTGGTTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTGGACAAGGCTGTTGTGTTTTTCTCACCGACGGAGGTGGTTGT  391

seq1  GTTAGCCATGGGGGCTTCCTCCCCTGGGCACTCAGCAGGAGGCAACTGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCCATGGGGGCTTCCTCCCCTGGGCACTCAGCAGGAGGCAACTGTA  441

seq1  GCCACCACACTTGGTCTCTCCATTTTCCACTCTTCATCTGGGAGAAATTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCACACTTGGTCTCTCCATTTTCCACTCTTCATCTGGGAGAAATTC  491

seq1  CAGGCTTTTTGGTACTGCCTCCTGGCTTGGGAGTGGGGTTAGGGATCCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTTTTGGTACTGCCTCCTGGCTTGGGAGTGGGGTTAGGGATCCTG  541

seq1  GCTGTGTCCCTCTTTCCTGTGCCTCACTCTGGGTCACACCTTGATGCCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTCCCTCTTTCCTGTGCCTCACTCTGGGTCACACCTTGATGCCCC  591

seq1  ACCCAAGCCACGGTATCACCCTGCATCCATCCACTGAGACAGAAGTTGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGCCACGGTATCACCCTGCATCCATCCACTGAGACAGAAGTTGCA  641

seq1  GGACCCCAGGGGAAGTGGCTTGAGGGTTCATCTTACTAAAGTGACTGGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCAGGGGAAGTGGCTTGAGGGTTCATCTTACTAAAGTGACTGGGG  691

seq1  TGTTGAGTCTGTGTCTGGGATGTGTGTTTGCCTGTGCTGGCTCGGGGGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGTCTGTGTCTGGGATGTGTGTTTGCCTGTGCTGGCTCGGGGGGT  741

seq1  GTTGACGCGGTCGAGTGAACAGAGAGTAACTAGGAAAGAATGTGGTTTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACGCGGTCGAGTGAACAGAGAGTAACTAGGAAAGAATGTGGTTTTC  791

seq1  TTCCTGCCCAGGACATGTGCTGCACCATTGGCCAAGCCAGGAATTTATTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCCAGGACATGTGCTGCACCATTGGCCAAGCCAGGAATTTATTC  841

seq1  CCCATTCAGTGATCTGGGGAGCCTACCTCTTCCTGCATGTCTTCCCTTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCAGTGATCTGGGGAGCCTACCTCTTCCTGCATGTCTTCCCTTCA  891

seq1  CTTCTTTGAGCCACTTCCTGCCCGTGCCCGGGTTTTAGTTTTTTCCTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGAGCCACTTCCTGCCCGTGCCCGGGTTTTAGTTTTTTCCTTCC  941

seq1  TAGAACAGGTTGAATCTCTTTGGAAAAAGTCCTTCTTCCCTTGTCAAAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAGGTTGAATCTCTTTGGAAAAAGTCCTTCTTCCCTTGTCAAAAG  991

seq1  GGGCAGAAAGTGCCCCTGCAGGTGAGAAGGAAGAGGTGGTGAGGATTTGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAAAGTGCCCCTGCAGGTGAGAAGGAAGAGGTGGTGAGGATTTGG  1041

seq1  GTGGCAGCCACTGAGTGACCAGCCCAGCCACTCTTCCTGGTTAGAATTC  1098
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGCCACTGAGTGACCAGCCCAGCCACTCTTCCTGGTTAGAATTC  1090

seq1: chr8_72895981_72897138
seq2: B6Ng01-104L19.g_67_1193

seq1  GAATTCCAGCGCTGGTCAGCAAGAACAGCCCCACACGTGTTTGGAGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCGCTGGTCAGCAAGAACAGCCCCACACGTGTTTGGAGCCAA  50

seq1  AGAAAACAGGAGGTAGCTCAGCCATTGGGACCTGGCCTCTCGGAACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAGGAGGTAGCTCAGCCATTGGGACCTGGCCTCTCGGAACACAG  100

seq1  CCACCTCCAGCCTTCCTCTGCAGGGCTGTTTGCCCTCCGTCCCCCTCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCCAGCCTTCCTCTGCAGGGCTGTTTGCCCTCCGTCCCCCTCCAC  150

seq1  CCCCTGCCCCCGTGAGTCCAAAGACAACTTGGGCACTGTTCTTGGCTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCCCCCGTGAGTCCAAAGACAACTTGGGCACTGTTCTTGGCTAGC  200

seq1  CTCACTCCCTGATTGTCTTTAAGCCCCAGGATTTTGCCAGCACACTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCCCTGATTGTCTTTAAGCCCCAGGATTTTGCCAGCACACTGTAT  250

seq1  GTGTGGTGTTCATCTATCAAGAATCCCAGGCTCATTCCTACTGAGGACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTGTTCATCTATCAAGAATCCCAGGCTCATTCCTACTGAGGACTA  300

seq1  TTGCTCAGCAGTTCCCACTAGATCCCCACCACCTCTGGGTAATAGTGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAGCAGTTCCCACTAGATCCCCACCACCTCTGGGTAATAGTGTAA  350

seq1  CCATTTCCAGACCCACCTTGGCTGCCTCTGACAGAGGCCGGGGACTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCAGACCCACCTTGGCTGCCTCTGACAGAGGCCGGGGACTGCTT  400

seq1  CCTCCAGTGTTCCCCAGCAGATACCTAGTAGGAGATATGACCCACAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGTGTTCCCCAGCAGATACCTAGTAGGAGATATGACCCACAACAG  450

seq1  GCACATTTGTGTAAAACATGGATGTACCAGAAATCTACAAGCACATACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTGTGTAAAACATGGATGTACCAGAAATCTACAAGCACATACCC  500

seq1  TCCGTCCGACATGCTCCACCAACTTCCACCTCTTTCCCTGCCCCCACCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTCCGACATGCTCCACCAACTTCCACCTCTTTCCCTGCCCCCACCAC  550

seq1  TGGAGCTAACCCCCCTGCTTCCTATGACTGATCTTTTTATTCTCTTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTAACCCCCCTGCTTCCTATGACTGATCTTTTTATTCTCTTTGTT  600

seq1  CCCTGGACTGTCTGTCTCCCCCAGGCAGCCCTCCATGGTTTCTTCTTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGACTGTCTGTCTCCCCCAGGCAGCCCTCCATGGTTTCTTCTTGGA  650

seq1  GCAAGAGATCTTCTTGGGTTGCAGCAGCCCCAAGTGGGCCAGCCCCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGATCTTCTTGGGTTGCAGCAGCCCCAAGTGGGCCAGCCCCCCTC  700

seq1  CCCTGAGCCCAGCTTCTCTGTTTACAGATGTAAGCTGTGAGTCCTGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGCCCAGCTTCTCTGTTTACAGATGTAAGCTGTGAGTCCTGGAAG  750

seq1  GCCAGGTGGAGAGGGTTAAAGCTGAGGTGTTTTACAGCTCAGAGTGTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTGGAGAGGGTTAAAGCTGAGGTGTTTTACAGCTCAGAGTGTGGC  800

seq1  TGGCCCGGGAAAGATTTTCAGTTCCCAGCCAGTCTTATTTTTATGACAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCGGGAAAGATTTTCAGTTCCCAGCCAGTCTTATTTTTATGACAGG  850

seq1  CTGTCTCCCTGGTGGCTGGGGAACAAAGCTTAGTGCAGTCCAGTGAGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCCCTGGTGGCTGGGGAACAAAGCTTAGTGCAGTCCAGTGAGAAG  900

seq1  AGAACCCCAGGGAAGCTGAGGTTCCTTCCTCCACCCCATCCCCAGCACCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  AGAACCCCAGGGAAGCTGAGGTTCCTTCCTCCACCCCATCCCCAGCAC--  948

seq1  CCACTGCCTCCTCAACAGTGCAAAAGGGGAAGTTGAGGCAAGGACATCGT  1000
       ||||||   |||||||||||||||  |||||||||||||| ||||||||
seq2  ACACTGC--TCTCAACAGTGCAAAA--GGAAGTTGAGGCAA-GACATCGT  993

seq1  TTATTCAGAATTCTGTTTGTTTGAAGGTGCGGGGAGGGGGGCGGAGGAAC  1050
      |||||||||||||||||   ||||  |||||| | | |        ||||
seq2  TTATTCAGAATTCTGTT--GTTGA--GTGCGGAGTGCG-------AGAAC  1032

seq1  CCTCACAACCTCCTGCTGACCTGGGCTGAGTCACACCCATAGGTCCCTTT  1100
      |  ||    || |||||||||| |||| |||  || ||| | || | |||
seq2  CTCCA----CTTCTGCTGACCT-GGCT-AGT-TCAACCAAAAGTTCTTTT  1075

seq1  TGCAGGACTTTGAAGTGCGGAGGGAGTGTGGGAGCCAGA-GTGGGTGAGT  1149
      |||| |||||||||  ||| |||   | |||||  | || ||||   |||
seq2  TGCA-GACTTTGAA--GCGAAGG--ATTTGGGA--CTGATGTGGTGTAGT  1118

seq1  TGGGACCTT  1158
      |||||||||
seq2  TGGGACCTT  1127