BAC Information

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BAC

Clone NameB6Ng01-110A13
Chromosome8 (Build37)
Map Location 131,013,826 - 131,124,295
singlet/doubletdoublet
Overlap geneNrp1, LOC668494
Upstream genePard3, EG628847
Downstream geneItgb1, LOC100042659, LOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110A13.bB6Ng01-110A13.g
ACCDH916773DH916774
length1,0571,080
definitionDH916773|Mus musculus domesticus DNA, BAC clone: B6Ng01-110A13, 5' end.DH916774|Mus musculus domesticus DNA, BAC clone: B6Ng01-110A13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,123,216 - 131,124,295)(131,013,826 - 131,014,929)
sequence
gaattcttgatcctcttgcttatattcccctaaggtctggggttactagc
acacaccaatctgcctagtttatgaagtgctgggaattaagtcccggaat
tcagatgtgctaggcaagtagtactctacctagagaaccaaatttccatt
ctcaaatgactatcatttttctaactttgtgattttggattctgtcacac
tagcagctaactgcatttcttcctggtacaataggaccaatgaggtccta
attcaattcatttgcgtaagctccccatttttacccttaataactataat
atacaataatgaagtatgtaccccaaagtgctactctaagttttatttga
ttacagctctaaacttagtgtatgaagacacctgcttctttcaatagttt
gttgattatacagtgtgctcatcctcagatgcacactcctttttgcctgt
gaatggcagcccatggctccagactgaatgaaagggaaatgcaccaagaa
agacagcattagcatactcctcccagagcaagtgtaccccactcagtacc
ccacacccccacaccacagttatacttcaacaggtcctgtgacctccagc
gcacttgcacatctgcatttgttatctgtaaaacaacaaaccattgtttg
aattgagatttttcagctttaaaggttattattctaatgctcacatctgt
cctgcttctttcttaaataacatgctgtatgcatgcgaagagtgtgttca
ttccagagcacctacagctaatttgctgcaagtctatggacatgccccta
gcctgcctggaacatctgtagcaagctaatcattttaactagaggaatta
gaccaatgctttctactagggaaaaatactgtggatcttagtattctgca
ccagacttttaatggtagactgaattgtggtttggattaatgaaagaaag
aatccatttatttactagagcctgacactttagtttagattacacttgaa
atgctcttcatacattacactttcatgtctatagctagctgcccacttgg
taaaaaa
gaattcccgagttccatcatcagaatccacacaaaagcagagtatatgga
gcatgctcacagatagagacaggcagatcgccatggctcactgactagca
ggcttggcctacatggcaagttccaggccccagtgagagccaatcacaaa
acacaagatggatggtgcctgaaaaataacatttgaaattgacctctgac
ttacacatagatatacacacatacatgaacatgtgcatacacacacacac
acatagaggagagaaatttatcttgaggattctgatcaatacaagaaact
cagcaggaatacaatatccatatactgcctaggttgctgtcattagaggc
ataaaagggtattcatgcttggacagacccctctgtttaatgcagttctc
tttacaaaggactttgaccctctgagggtctttccacatcctcacagcag
ctcacagtatgttggtgacttatgattgtgtgggcttccatatccctctt
gcttggactttaggaccagctgataaccaagcagtgatcatactagatag
gaacctcgacttgaaaattaaatccttgctcacatcctgtgcttaatgac
ccaactgcaggcaagatcctttcagcagcacagctggcatttgctcacag
aagccataaatttgttttaagttcagaatattgcctcctgctatttttaa
gaagggatttagtccaattattactattgaatttatgagaactgtgcaca
actccagggcctgagtaataatttaaaagcttagccaccagggtccctgc
atcttcatatcttcctctactcaactttcttctcttctttctctggcttt
tcttcttcttcctgatccttatgcagcttttggctttttgtttttagttg
gttttggtttatttgttgttttccctcacaaacgtctgtgaaactttgga
aattggtagcttctatgcaaggtgaatcgtaaggctgaattctacaatga
cagatccaagcccccctgaaatgcaatgaatttgttttattttaaattta
ttggccattctacaatgctaagatacaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_131123216_131124295
seq2: B6Ng01-110A13.b_43_1099 (reverse)

seq1  TTTTTTACAAAGTGGGCAGCTAGCCTAATAAGGACCATTGAAAGTGTAAT  50
      |||||||| |||||||||||||||    ||  |||   ||||||||||||
seq2  TTTTTTACCAAGTGGGCAGCTAGC----TATAGAC--ATGAAAGTGTAAT  44

seq1  GTATGAAGGAAGCATTTCAAAAGTGTAAATCCTAAAACTAAAAGTGTCAG  100
      ||||||||  ||||||||  |||||| ||||   ||||| ||||||||||
seq2  GTATGAAG--AGCATTTC--AAGTGT-AATC--TAAACT-AAAGTGTCAG  86

seq1  GCTCCTAGTAAAATAAAATGGATTTCCTTTTCTTTCATTAATCCAAACCA  150
      ||| ||||||||   |||||||||    ||||||||||||||||||||||
seq2  GCT-CTAGTAAA--TAAATGGATT---CTTTCTTTCATTAATCCAAACCA  130

seq1  CAATTCAGTTCTACCATTAAAAGTCTGGTGCAGAATACTAAGATCCACAG  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCAG-TCTACCATTAAAAGTCTGGTGCAGAATACTAAGATCCACAG  179

seq1  TATTTTTCCCTAGTAGAAAGCATTGGTCTAATTCCTCTAGTTAAAATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATTTTTCCCTAGTAGAAAGCATTGGTCTAATTCCTCTAGTTAAAATGA-  228

seq1  TTAGCTTGCTACAGATGTTCCAGGCAGGCTAGGGGCATGACCATAGACTT  300
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTAGCTTGCTACAGATGTTCCAGGCAGGCTAGGGGCATGTCCATAGACTT  278

seq1  GCAGCAAATTAGCTGTTTGGTGCTCTGGAATGAACACACTCTTTGCATGC  350
      ||||||||||||||| | ||||||||||||||||||||||||| ||||||
seq2  GCAGCAAATTAGCTG-TAGGTGCTCTGGAATGAACACACTCTTCGCATGC  327

seq1  CTACAGCATGTTATTTAAGAAAGAAGCAGGACAGATCTGAGCATTAGAAT  400
       ||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATACAGCATGTTATTTAAGAAAGAAGCAGGACAGATGTGAGCATTAGAAT  377

seq1  AATAACCTTTAAAGCTGAAAAATCTCAATTCAAACAATGGTTTGTTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCTTTAAAGCTGAAAAATCTCAATTCAAACAATGGTTTGTTGTTT  427

seq1  TACAGATAACAAATGCAGATGTGCAAGTGCGCTGGAGGTCACAGGACCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAACAAATGCAGATGTGCAAGTGCGCTGGAGGTCACAGGACCTG  477

seq1  TTGAAGTATAACTGTGGTGTGGGGGTGTGGGGTACTGAGTGGGGTACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTATAACTGTGGTGTGGGGGTGTGGGGTACTGAGTGGGGTACACT  527

seq1  TGCTCTGGGAGGAGTATGCTAATGCTGTCTTTCTTGGTGCATTTCCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGGGAGGAGTATGCTAATGCTGTCTTTCTTGGTGCATTTCCCTTT  577

seq1  CATTCAGTCTGGAGCCATGGGCTGCCATTCACAGGCAAAAAGGAGTGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTCTGGAGCCATGGGCTGCCATTCACAGGCAAAAAGGAGTGTGC  627

seq1  ATCTGAGGATGAGCACACTGTATAATCAACAAACTATTGAAAGAAGCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGGATGAGCACACTGTATAATCAACAAACTATTGAAAGAAGCAGG  677

seq1  TGTCTTCATACACTAAGTTTAGAGCTGTAATCAAATAAAACTTAGAGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCATACACTAAGTTTAGAGCTGTAATCAAATAAAACTTAGAGTAG  727

seq1  CACTTTGGGGTACATACTTCATTATTGTATATTATAGTTATTAAGGGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGGGGTACATACTTCATTATTGTATATTATAGTTATTAAGGGTAA  777

seq1  AAATGGGGAGCTTATGCAAATGAATTGAATTAGGACCTCATTGGTACTAT  850
      |||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  AAATGGGGAGCTTACGCAAATGAATTGAATTAGGACCTCATTGGTCCTAT  827

seq1  TGTACCAGGAAGAAATGCAGTTAGCTGCTAGTGTGACAGAATCCAAAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAGGAAGAAATGCAGTTAGCTGCTAGTGTGACAGAATCCAAAATC  877

seq1  ACAAAGTTAGAAAAATGATAGTCATTTGAGAATGGAAATTTGGTTCTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACAAAGTTAGAAAAATGATAGTCATTTGAGAATGGAAATTTGGTTCTCTA  927

seq1  GGTAGAGTACTACTTGCCTAGCACATCTGAATTCCTGGACTTAATTCCCA  1000
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGTAGAGTACTACTTGCCTAGCACATCTGAATTCCGGGACTTAATTCCCA  977

seq1  GCACTTCATAAACTAGGCAGATTGGTGTGTGCTAGTAACCCCAGACCTTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCATAAACTAGGCAGATTGGTGTGTGCTAGTAACCCCAGACCTTA  1027

seq1  GGGGAATATAAGCAAGAGGATCAAGAATTC  1080
      ||||||||||||||||||||||||||||||
seq2  GGGGAATATAAGCAAGAGGATCAAGAATTC  1057

seq1: chr8_131013826_131014929
seq2: B6Ng01-110A13.g_67_1146

seq1  GAATTCCTGAGTTCCATCATCAGAATCCACACAAAAGCAGAGTATATGGA  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGAGTTCCATCATCAGAATCCACACAAAAGCAGAGTATATGGA  50

seq1  GCATGCTCAGAGATAGAGACAGGCAGATCGCCATGGCTCACTGACTAGCA  100
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTCACAGATAGAGACAGGCAGATCGCCATGGCTCACTGACTAGCA  100

seq1  GGCTTGGCCTACATGGCAAGTTCCAGGCCCCAGTGAGAGCCAATCACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGCCTACATGGCAAGTTCCAGGCCCCAGTGAGAGCCAATCACAAA  150

seq1  ACACAAGATGGATGGTGCCTGAAGAATAACATTTGAAATTGACCTCTGAC  200
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACACAAGATGGATGGTGCCTGAAAAATAACATTTGAAATTGACCTCTGAC  200

seq1  TTACACATAGATATACACACATACATGAACATGTGCATACACACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATAGATATACACACATACATGAACATGTGCATACACACACACAC  250

seq1  ACATAGAGGAGAGAAATTTATCTTGAGGATTCTGATCAATACAAGAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGGAGAGAAATTTATCTTGAGGATTCTGATCAATACAAGAAACT  300

seq1  CAGCAGGAATACAATATCCATATACTGCCTAGGTTGCTGTCATTAGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGAATACAATATCCATATACTGCCTAGGTTGCTGTCATTAGAGGC  350

seq1  ATAAAAGGGTATTCATGCTTGGACAGACCCCTCTGTTTAATGCAGTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGGGTATTCATGCTTGGACAGACCCCTCTGTTTAATGCAGTTCTC  400

seq1  TTTACAAAGGACTTTGACCCTCTGAGGGTCTTTCCACATCCTCACAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAGGACTTTGACCCTCTGAGGGTCTTTCCACATCCTCACAGCAG  450

seq1  CTCACAGTATGTTGGTGACTTATGATTGTGTGGGCTTCCATATCCCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGTATGTTGGTGACTTATGATTGTGTGGGCTTCCATATCCCTCTT  500

seq1  GCTTGGACTTTAGGACCAGCTGATAACCAAGCAGTGATCATACTAGATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGACTTTAGGACCAGCTGATAACCAAGCAGTGATCATACTAGATAG  550

seq1  GAACCTCGACTTGAAAATTAAATCCTTGCTCACATCCTGTGCTTAATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCGACTTGAAAATTAAATCCTTGCTCACATCCTGTGCTTAATGAC  600

seq1  CCAACTGCAGGCAAGATCCTTTCAGCAGCACAGCTGGCATTTGCTCACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGCAGGCAAGATCCTTTCAGCAGCACAGCTGGCATTTGCTCACAG  650

seq1  AGGCCATAAATTTGTTTTAAGTTCAGAATATTGTTTCCTGCTATTTTTAA  700
      | |||||||||||||||||||||||||||||||  |||||||||||||||
seq2  AAGCCATAAATTTGTTTTAAGTTCAGAATATTGCCTCCTGCTATTTTTAA  700

seq1  GAAGGGATTTAGTCCAATTATTACTATTGAATTTAATGAGAACTGTGCAC  750
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAAGGGATTTAGTCCAATTATTACTATTGAATTT-ATGAGAACTGTGCAC  749

seq1  AACTCCAGGGCCTGAGTAATAATTTAAAAGCTTAGCCATCAGGGTCCCTG  800
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACTCCAGGGCCTGAGTAATAATTTAAAAGCTTAGCCACCAGGGTCCCTG  799

seq1  CATCTTCATATCTTTCCTCTACTCAACTTTCTTCTCTTCTTTCTCTGTCT  850
      |||||||||||| |||||||||||||||||||||||||||||||||| | 
seq2  CATCTTCATATC-TTCCTCTACTCAACTTTCTTCTCTTCTTTCTCTGGC-  847

seq1  TTTTCTTCTTCTTTCCTGATCCTTATGCAGCTTTTTGGCTTTTTGTTTTT  900
      ||||||||||| ||||||||||||||||||| ||||||||||||||||||
seq2  TTTTCTTCTTC-TTCCTGATCCTTATGCAGC-TTTTGGCTTTTTGTTTTT  895

seq1  TGTTTGTTTTTGGTTTTATTTGTTTGTTTTTCCCTCTACAAATGTCTGTT  950
       ||| |||||  | ||||||||||   ||||||||| ||||| ||||| |
seq2  AGTTGGTTTT--GGTTTATTTGTT--GTTTTCCCTC-ACAAACGTCTG-T  939

seq1  GATACTTTGGATGATTGGTCACCTTCATATCCAAGGTGAATTGTCAGCAC  1000
      || ||||||||  |||||| | |||| ||| |||||||||| || ||  |
seq2  GAAACTTTGGA-AATTGGT-AGCTTC-TATGCAAGGTGAATCGTAAG-GC  985

seq1  TGAATTCTACAAT-CCAGATCCCAGCCCCACTGAAATGCATTG-ATTTGT  1048
      |||||||||||||  ||||||| |||||| |||||||||| || ||||||
seq2  TGAATTCTACAATGACAGATCCAAGCCCCCCTGAAATGCAATGAATTTGT  1035

seq1  TTTTTTTTTAATTTTTTGGCCATTTCTAAAATGCTAAGTTCATATGCTTT  1098
      ||| |||| ||||| ||||||| ||||| |||||||||           |
seq2  TTTATTTTAAATTTATTGGCCA-TTCTACAATGCTAAG----------AT  1074

seq1  ACAATG  1104
      ||||||
seq2  ACAATG  1080