BAC Information

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BAC

Clone NameB6Ng01-116A13
Chromosome8 (Build37)
Map Location 29,307,056 - 29,307,736
singlet/doubletsinglet
Overlap genenone
Upstream geneGot1l1, Adrb3, Eif4ebp1, LOC732482, Tex24, Chrnb3, Chrna6, 4921537P18Rik, Gm1698, EG666422, LOC666430
Downstream geneEG666446, LOC100042598, Unc5d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116A13.bB6Ng01-116A13.g
ACCDH921137DH921138
length1,2591,084
definitionDH921137|Mus musculus domesticus DNA, BAC clone: B6Ng01-116A13, 5' end.DH921138|Mus musculus domesticus DNA, BAC clone: B6Ng01-116A13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagattctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgactttagtacaaggagataagtatggatcgatgtgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctactggtctgtctcatccagcaatacctctcctgggcatatatccaga
agattccccaactggtaagaaggacacatgctccactatgttcatagcag
ccttatttataatagccagaagctggaaacaacccagatgcccctcaaca
gaggaatggatacagaaaatgtggtacatctacacaatggagtactactc
agctattaaaaagaatgaatttatgaaattcctagccaaatagatggacc
tggagggcatcatcctgagtgaggtaacacattcacaaaggaactcacac
aatatgtactcactgataagtggatattagcccaaaaccttggataccca
agatataagatacaatttcctaaacacttgaaactcaagaaaaatgaaga
ctgaagtgtggacactatgccctccttagaagtgggaacaaaacaccctt
tggaagagttacagagacaagtttgagctgaaatgaaagatggtccatgt
agagacttccatatccagggatccatcccataatcagcatcaacgctgac
tcaatgcatacactagcaaattttatcgaaagaccgaatgtactgtctct
gggagacatggcaagttagcaaaccaaatgatgttcagtcgctatgaggt
acaaggctcaatgggagacttggaaagagtccaggagcttaagaggaatc
tgttccctc
gaattcagttaagaatttattgctagggctcctttctcttttgccctgga
gcttactccctttttggccaggcaagagggaggcttggagctattaactc
tttgtgaactaggaaaaaagtcacactcacagaaagaaaaaactttttac
acaagcaagtatcacagacatatacacattcatacacacacatcttcttg
ttgggtctggacacctgcttcctctactccacaagtattcatgcctatat
atgaatatttggtggctggagcaaaagcccccatgagcaagttcccctga
gcaatcaccaatggagaaaaacctaactcattctggatgaaatataagct
ccaatttttattgctcagagaaagaaaaacgttctacctttttactgctg
aatgaaaaatgccttgtaagaacaaaagccactctcctattgttgttctt
agtacttatactttctcagaatatatcacatgggtttgaaagcatcttta
tattgaaaagtttatcatatattgaataagaagtttcaataggaatgttt
acacgagtttcattaagacatgtattatcagtcagtagctctatgaattc
attaagagtttaaaacaataagtcttacgtcattagttagcatggctttt
atcaagaggcaaatcatctgccttgtgcttcactactattgcagttttgt
gtagataaatctagtcaacatttcatcttctgtccttgcacccacaataa
attctccactgctagtttacgacctttagttatcagacaatgctttcaca
gccagaccagaagggaagccttccctgatcacaaatatgtttcaagcctg
ctttctatcctagtgcaattacctactgatgcatgaagtttacagagctc
tatgactgttttcatactacagacccattccctaagctggacagttaggt
ccctggcactcacttcatgatgtatgacctcataagttcttactctttaa
tctttcactggggatcagattcaatacataatatttggggttccacaaat
agtcaggcatgttacattctttccggagaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_29307056_29307736
seq2: B6Ng01-116A13.g_484_1152

seq1  GTAAGAACAAAAGCCACTCTCCTATTGTTGTTCTTAGTACTTATACTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAACAAAAGCCACTCTCCTATTGTTGTTCTTAGTACTTATACTTTC  50

seq1  TCAGAATATATCACATGGGTTTGAAAGCATCTTTATATTGAAAAGTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATATATCACATGGGTTTGAAAGCATCTTTATATTGAAAAGTTTAT  100

seq1  CATATATTGAATAAGAAGTTTCAATAGGAATGTTTACACGAGTTTCATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATTGAATAAGAAGTTTCAATAGGAATGTTTACACGAGTTTCATTA  150

seq1  AGACATGTATTATCAGTCAGTAGCTCTATGAATTCATTAAGAGTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTATTATCAGTCAGTAGCTCTATGAATTCATTAAGAGTTTAAAA  200

seq1  CAATAAGTCTTACGTCATTAGTTAGCATGGCTTTTATCAAGAGGCAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGTCTTACGTCATTAGTTAGCATGGCTTTTATCAAGAGGCAAATC  250

seq1  ATCTGCCTTGTGCTTCACTACTATTGCAGTTTTGTGTAGATAAATCTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCTTGTGCTTCACTACTATTGCAGTTTTGTGTAGATAAATCTAGT  300

seq1  CAACATTTCATCTTCTGTCCTTGCACCCACAATAAATTCTCCACTGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTCATCTTCTGTCCTTGCACCCACAATAAATTCTCCACTGCTAG  350

seq1  TTTACGACCTTTAGTTATCAGACAATGCTTTCACAGCCAGACCAGAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACGACCTTTAGTTATCAGACAATGCTTTCACAGCCAGACCAGAAGGG  400

seq1  AAGCCTTCCCTGATCACAAATATGTTTCAAGCCTGCTTTCTATCCTAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTCCCTGATCACAAATATGTTTCAAGCCTGCTTTCTATCCTAGTG  450

seq1  CAATTACCTACTGATGCATGAAGGTTTACAGAGCTCTAATGACTGTTTTC  500
      |||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  CAATTACCTACTGATGCATGAA-GTTTACAGAGCTCT-ATGACTGTTTTC  498

seq1  ATACTACAGACCCATTCCCCTAAGGCTGGACAGGTAGGTCCCTGGCACTC  550
      |||||||||||||||| |||||| ||||||||| ||||||||||||||||
seq2  ATACTACAGACCCATT-CCCTAA-GCTGGACAGTTAGGTCCCTGGCACTC  546

seq1  ACCTTCATGATGTAATGACCTCCATAAGTTCTTACCTCTTTAATCTTTCA  600
      | ||||||||||| ||||||| |||||||||||| |||||||||||||||
seq2  A-CTTCATGATGT-ATGACCT-CATAAGTTCTTA-CTCTTTAATCTTTCA  592

seq1  ACTTGGGGATCAGATTTCAATACATAATATTTGGGGTATCACAAATAGTC  650
         ||||||||||| ||||||||||||||||||||||  |||||||||||
seq2  --CTGGGGATCAGA-TTCAATACATAATATTTGGGGTTCCACAAATAGTC  639

seq1  AGGCCATGGTACATTCTTTCTGAGGAAAAAA  681
      ||| |||| ||||||||||| |  |||||||
seq2  AGG-CATGTTACATTCTTTCCGGAGAAAAAA  669