BAC Information

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BAC

Clone NameB6Ng01-118M02
Chromosome8 (Build37)2 (Build37)
Map Location 66,598,281 - 66,598,796140,983,752 - 140,984,845
singlet/doubletsingletsinglet
Overlap geneTll1
Upstream geneSpock3, LOC384831, EG244495
Downstream geneLOC100040989, Cpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118M02.bB6Ng01-118M02.g
ACCDH923151DH923152
length1,0191,075
definitionDH923151|Mus musculus domesticus DNA, BAC clone: B6Ng01-118M02, 5' end.DH923152|Mus musculus domesticus DNA, BAC clone: B6Ng01-118M02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(66,598,281 - 66,598,796)(140,983,752 - 140,984,845)
sequence
gaattccaataatttgccaaaataaacccttccttagattttttttcttg
tttcttgtttgtttgttttgtttttgttttgtttgacctggtattttatc
acaacaatgagaaaagcagccaatctacacctcaaggtttttatttttag
tcttccatggtcctgagggtggtgggaagtgggtagtcagatgaaacaga
aaagctaccttgggtttttagctaaataattgatactttcatatataaac
tcacctaataagtattgggggagtgcttgaaacaatttctgttcaggtcc
acttcaaatttaacaggatttcttttatttttgtatgctaaatccagcag
tcctactttgcagacacagaaatcaagctactaactacagctacctgttc
cattggtgatcttcgctataggacttaaaagaacatatattcacaaacac
acacacacacacacacacacacacacacacaatcttttgcataaaaccag
attccatcctggtagaaacatcattttgtcaacaaatgtattagaaatat
cccctcattcaggagacagcagatactggcaaggatgtggagaaagagga
acattcctccattgctggtgggattgcaagctggtacaaccactctggaa
ttcagtttggcagttcctcagaaaattggacatagtactactggaagatc
caactataccactcctggtcatatgcccaggagatatccaacttataata
aggacacatgttccactatgttcatagcagccttatttataatagccaga
agctggaaagaacatagatgttcctcaacagagaaatggtttacagaaaa
tgtggtacatttacacaatggagtactactcagttattaaaaacaatgta
tttatgaaattcttaggcaaatgggatggatctggaggatattattctga
atgaggtaacccaattacaaaagaacacatatgatatgcactcgctgata
agtgaatataatccagaaa
gaattcctcctggatttgcctcggttaatgtcacctattttgatggttat
tttcaatttgttttacaatgtcatttgtattacttgcgtgatacttttgc
tctgttccttttttttttcctttcattttcttttcttacagaatttactg
ttcattttcaaattactccagaccctaatagtcttatttcgctctgggca
gaatttgtgtatctattgaattgcattctgttttgttgaatttccttcag
tgagtgtctctccaagagcttctttcagtggcaacgcattaaacgacttc
ttcagggcctttgggctgcgtttgtcatgtacccataatcaacccggtac
tacgccaaatgtcctaattaattcactgtgtgctcccacttaaatattta
tgaatgtgactagttgaaatgctgatatgcaccttattactggccttaaa
agaaatgtttttttttttcctggtagtggtatcaattttaagaattcaga
tttgaaacgtttgggttagcaatttcagtggcagcatcatgttaatggag
tcctggaagctgctggcgttaagatgagtaaattaggaagtcaacactgc
ttatttaggtccattaggataaaatagtaggagagcctggacttaacaaa
aatcaatcctgcacacagagtgcacatttattaggagtattttatgatgg
ctgggggcagccaccctctttcttaggaagaatgctacattagtgtcctc
aaggccttggactattgtgacactgaccatttcagaacaactttgagata
gccaggaagccaccagagaccattccaactacatgcaaaataaaaataaa
taaataagttggcatcaaatgacttcttgaactgtttattgatatcctcc
ctttaactatccatttctaccctagtctgtagccctttctaagcagtgta
gtagcagaatttgtaacattgtatgagtatttgagcaaactctttctcta
cagtccccacatatagcagtgtagtgatgagtgtatgtctagtatggcag
atataatagctatctatttacagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_66598281_66598796
seq2: B6Ng01-118M02.b_578_927

seq1  AACAAATGTATTAGAAAAGTCAC----TTCTG--GAAAGCAAACTCTTTG  44
      |||||||||||||||||  || |    ||| |  || |||| |  |  ||
seq2  AACAAATGTATTAGAAATATCCCCTCATTCAGGAGACAGCAGATAC--TG  48

seq1  GCCATTGAATTATTAACGTATCAACTGAAGGCCTGTTAGGAGAAGAAACA  94
      ||                         ||||  |||  ||||||      
seq2  GC-------------------------AAGG-ATGT--GGAGAA------  64

seq1  CAAATAAAGGACTTTGCAAAAAGTTCTGAGAAACGACAAATCATGATAAA  144
           | |||        || | | ||         | | |  || |   
seq2  -----AGAGG--------AACATTCCT---------CCATTGCTGGT---  89

seq1  TATAATGGGTATGGACTTATTATGAAACCACAATGAAGTTTTTATGAACT  194
             || || |     |  |  ||||||  || | ||          
seq2  -------GGGATTGCAAGCTGGTACAACCACTCTGGAATT----------  122

seq1  ATATGTATGTATACATACAAGTTACAATTATTTGATGTTTTAGCAGTTGT  244
                              ||            ||| ||||||  
seq2  ------------------------CA-----------GTTTGGCAGTTCC  137

seq1  TTTTAAATGTATTTATTTTCATGCATATGGGTGTTTTGCCTGCATGTATG  294
      |   |||       ||     || | ||                 |||  
seq2  TCAGAAA-------AT-----TGGACAT----------------AGTACT  159

seq1  TCTGCATGCTACATTTCTTCCTGATACCTACCCAAGCCAAAAGAGAGCAT  344
       ||| | | | ||  |       |||||   ||  | || | |       
seq2  ACTGGAAGATCCAACT-------ATACCACTCCTGGTCATATG-------  195

seq1  CAGGCACCCTAGGAGCTATAAATGTAAGCTGCAATGTTGGTGCTAAGAAT  394
             || |||||    | ||  ||  |  |||   |      | |  
seq2  -------CCCAGGAG----ATATCCAACTTATAATAAGG------ACACA  228

seq1  TGTACCA--AGGTCCTTAGGA---TTAGCGTCTAGTACCACTGAACCTGG  439
      ||| |||  | || | ||| |   |||   | || || | | ||| ||||
seq2  TGTTCCACTATGTTCATAGCAGCCTTA-TTTATAATAGC-CAGAAGCTGG  276

seq1  A---CTCTTATTTCATTTTTATTTTAATAATGGTTTGTTTGGGGAAAAAA  486
      |     | ||  |  |  | |    |  ||||||||        | ||||
seq2  AAAGAACATAGATGTTCCTCAACAGAGAAATGGTTT------ACAGAAAA  320

seq1  TGTGGTACATTTACACAATGGAGTACTACT  516
      ||||||||||||||||||||||||||||||
seq2  TGTGGTACATTTACACAATGGAGTACTACT  350

seq1: chr2_140983752_140984845
seq2: B6Ng01-118M02.g_68_1142

seq1  GAATTCCTCCTGGATTTGCCTCGGTTAATGTCACCTATTTTGATGGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTGGATTTGCCTCGGTTAATGTCACCTATTTTGATGGTTAT  50

seq1  TTTCAATTTGTTTTACAATGTCATTTGTATTACTTGCGTGATACTTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTTGTTTTACAATGTCATTTGTATTACTTGCGTGATACTTTTGC  100

seq1  TCTGTTCCTTTTTTTTTTCCTTTCATTTTCTTTTCTTACAGAATTTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCCTTTTTTTTTTCCTTTCATTTTCTTTTCTTACAGAATTTACTG  150

seq1  TTCATTTTCAAATTACTCCAGACCCTAATAGTCTTATTTCGCTCTGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTCAAATTACTCCAGACCCTAATAGTCTTATTTCGCTCTGGGCA  200

seq1  GAATTTGTGTATCTATTGAATTGCATTCTGTTTTGTTGAATTTCCTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGTGTATCTATTGAATTGCATTCTGTTTTGTTGAATTTCCTTCAG  250

seq1  TGAGTGTCTCTCCAAGAGCTTCTTTCAGTGGCAACGCATTAAACGACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTCTCTCCAAGAGCTTCTTTCAGTGGCAACGCATTAAACGACTTC  300

seq1  TTCAGGGCCTTTGGGCTGCGTTTGTCATGTACCCATAATCAACCCGGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGCCTTTGGGCTGCGTTTGTCATGTACCCATAATCAACCCGGTAC  350

seq1  TACGCCAAATGTCCTAATTAATTCACTGTGTGCTCCCACTTAAATATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCCAAATGTCCTAATTAATTCACTGTGTGCTCCCACTTAAATATTTA  400

seq1  TGAATGTGACTAGTTGAAATGCTGATATGCACCTTATTACTGGCCTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTGACTAGTTGAAATGCTGATATGCACCTTATTACTGGCCTTAAA  450

seq1  AGAAATGTTTTTTTTTTTCCTGGTAGTGGTATCAATTTTAAGAATTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTTTTTTTTTTTCCTGGTAGTGGTATCAATTTTAAGAATTCAGA  500

seq1  TTTGAAACGTTTGGGTTAGCAATTTCAGTGGCAGCATCATGTTAATGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACGTTTGGGTTAGCAATTTCAGTGGCAGCATCATGTTAATGGAG  550

seq1  TCCTGGAAGCTGCTGGCGTTAAGATGAGTAAATTAGGAAGTCAACACTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAAGCTGCTGGCGTTAAGATGAGTAAATTAGGAAGTCAACACTGC  600

seq1  TTATTTAGGTCCATTAGGATAAAATAGTAGGAGAGCCTGGACTTAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGGTCCATTAGGATAAAATAGTAGGAGAGCCTGGACTTAACAAA  650

seq1  AATCAATCCTGCACACAGAGTGCACATTTATTAGGAGTATTTTATGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATCCTGCACACAGAGTGCACATTTATTAGGAGTATTTTATGATGG  700

seq1  CTGGGGGCAGCCACCCTCTTTCTTAGGAAGAATGCTACATTAGTGTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGCAGCCACCCTCTTTCTTAGGAAGAATGCTACATTAGTGTCCTC  750

seq1  AAGGCCTTGGACTATTGTGACACTGACCATTTCAGAACAACTTTGAGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTTGGACTATTGTGACACTGACCATTTCAGAACAACTTTGAGATA  800

seq1  GCCAGGAAGCCACCAGAGACCATTCCAACTACATGCAAAAATAAAAATAA  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCCAGGAAGCCACCAGAGACCATTCCAACTACATGC-AAAATAAAAATAA  849

seq1  ATAAATAAGTTGGCATCAAATGACTTCTTGAACTGTTTATTGATATCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAGTTGGCATCAAATGACTTCTTGAACTGTTTATTGATATCCTC  899

seq1  CCTTTAACTATCCATTTCTACCCTAGTCTGTAGCCCTTTCTAAGCAGTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCTTTAACTATCCATTTCTACCCTAGTCTGTAGCCCTTTCTAAGCAG-TG  948

seq1  TAGTAAGCAGGAATTTGTAACCATTGTATTGAGTATTTGAGCAAACTCTT  1000
      |||| |||| |||||||||| ||||||| |||||||||||||||||||||
seq2  TAGT-AGCA-GAATTTGTAA-CATTGTA-TGAGTATTTGAGCAAACTCTT  994

seq1  TCTCTACAGTCCCCACATTATAGCAGTGTAGTTTGAATTTGAGTGTATGT  1050
      ||||||||||||||||| |||||||||||||  |||   |||||||||| 
seq2  TCTCTACAGTCCCCACA-TATAGCAGTGTAG--TGA---TGAGTGTATG-  1037

seq1  TCTAAGTATGGCAAGTATATAATAGCTAATTCTATTTTACAGTG  1094
      ||| |||||||||   ||||||||||||  |||| |||||||||
seq2  TCT-AGTATGGCA--GATATAATAGCTA--TCTA-TTTACAGTG  1075