BAC Information

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BAC

Clone NameB6Ng01-119I19
Chromosome8 (Build37)
Map Location 61,202,098 - 61,322,722
singlet/doubletdoublet
Overlap gene4930431L04Rik
Upstream geneLOC100040711
Downstream geneBC030500, LOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119I19.bB6Ng01-119I19.g
ACCDH923734DH923735
length2141,137
definitionDH923734|Mus musculus domesticus DNA, BAC clone: B6Ng01-119I19, 5' end.DH923735|Mus musculus domesticus DNA, BAC clone: B6Ng01-119I19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,322,509 - 61,322,722)(61,202,098 - 61,203,238)
sequence
gaattctgttctagtttcatgactagaacgctaaccaggaaatagttgtt
ttgttttgttttttaaattcaaacatgtaagtaaaaagaacaaaggaata
ccccggcactgttgatgttaataaaaatttacttggctggtgtgtctgtg
tgtgtgtgtatgcatgtatgtatgtgtgtatgtgtatgtgtgtcattgtg
tgctgggtatatct
gaattccaagattagactttatctatgtcaacagctacaacgaggcattt
taaaaagtatcattttcacatgcacagatttcatttttccaccacaatat
ttaataatgagagatactgatgatggtttcctgttttcaaatgccataat
atatagttttttttttaaatttatagtttatgaacagaacagtttagtgg
ttggacatgtattcagaaggacttaatgtctatttaatttagaaattgga
taaggaagaatattatcatagacaagaaatagcgactaagccagactgta
gttgcgcacgcctttaatcccagcacttgggaggcagaggcaggtggatt
ttgtagttccaggccagcctagtctacagagtgaattccaggacagccaa
ggctacaccgagaaaccatgtcttgaaaacaaacaacaaacaaagaagaa
aagatcaaaaaaacaaagaaatagtgactaataataaatgcattatctag
agttgtgtgcgtgtatgaatattgtacatgtatagaacaacaaaaatata
tattggagctataagatagttaggatctgtgaaataaggatgcacttttg
aataaaggcattttccttgcagtttccctctagtctgccttgttggactc
tgtgatctaaaggaagtattcaagagcactagacaaactagttatactta
atcactttaatatagctgtaaatagctaatcaaaatcttggcagtgtttg
ggtgataggcagagccccacgttttaatgaacatccttgctaaagaatcc
acaaatttgttgctcacagtatttatcatctacctttagttgtctcaagt
gccagctgttgtctttattagtgtgtaaaatatctgattgcttttttaat
aaagaagcttagtattccatggctttttttcttatgaaaaagaacaaata
aagtgctgtttgtaaagtctatgctttctagttaataaaacacactatgt
aggaagtaggcgaactggagttgatcttgatcttttcaggtcccctaaaa
ccagaaaaatgatctatctactttattactttgatgggatggtagcttct
tagaatcaatttatcaatcataatttctggcttaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61322509_61322722
seq2: B6Ng01-119I19.b_44_257 (reverse)

seq1  AGATATACCCAGCACACAATTACACACATACACATACACACATACATACA  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGATATACCCAGCACACAATGACACACATACACATACACACATACATACA  50

seq1  TGCATACACACACACACAGACACACAAACCAATTAAATTTTTATTAACAT  100
      ||||||||||||||||||||||||| | |||| |||||||||||||||||
seq2  TGCATACACACACACACAGACACACCAGCCAAGTAAATTTTTATTAACAT  100

seq1  CAACAGTGCCACTGTATTCCTTTGTTCTTTTTACTTACATGTTTGAATTT  150
      ||||||||||   |||||||||||||||||||||||||||||||||||||
seq2  CAACAGTGCCGGGGTATTCCTTTGTTCTTTTTACTTACATGTTTGAATTT  150

seq1  AAAAAAAAAAACAAAACAAGTATTTCATGGTTTGCATTCTAGTCATGAAA  200
      |||||| |||||||||||| |||||| ||||| || ||||||||||||||
seq2  AAAAAACAAAACAAAACAACTATTTCCTGGTTAGCGTTCTAGTCATGAAA  200

seq1  CTAGAACAGAATTC  214
      ||||||||||||||
seq2  CTAGAACAGAATTC  214

seq1: chr8_61202098_61203238
seq2: B6Ng01-119I19.g_69_1205

seq1  GAATTCCAAGATTAGACTTTATCTATGTCAACAGCTACAACGAGGCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGATTAGACTTTATCTATGTCAACAGCTACAACGAGGCATTT  50

seq1  TAAAAAGTATCATTTTCACATGCACAGATTTCATTTTTCCACCACAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTATCATTTTCACATGCACAGATTTCATTTTTCCACCACAATAT  100

seq1  TTAATAATGAGAGATACTGATGATGGTTTCCTGTTTTCAAATGCCATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATGAGAGATACTGATGATGGTTTCCTGTTTTCAAATGCCATAAT  150

seq1  ATATAGTTTTTTTTTTAAATTTATAGTTTATGAACAGAACAGTTTAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTTTTTTTTTAAATTTATAGTTTATGAACAGAACAGTTTAGTGG  200

seq1  TTGGACATGTATTCAGAAGGACTTAATGTCTATTTAATTTAGAAATTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACATGTATTCAGAAGGACTTAATGTCTATTTAATTTAGAAATTGGA  250

seq1  TAAGGAAGAATATTATCATAGACAAGAAATAGCGACTAAGCCAGACTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAGAATATTATCATAGACAAGAAATAGCGACTAAGCCAGACTGTA  300

seq1  GTTGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATT  350

seq1  TTGTAGTTCCAGGCCAGCCTAGTCTACAGAGTGAATTCCAGGACAGCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTTCCAGGCCAGCCTAGTCTACAGAGTGAATTCCAGGACAGCCAA  400

seq1  GGCTACACCGAGAAACCATGTCTTGAAAACAAACAACAAACAAAGAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACACCGAGAAACCATGTCTTGAAAACAAACAACAAACAAAGAAGAA  450

seq1  AAGATCAAAAAAACAAAGAAATAGTGACTAATAATAAATGCATTATCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAAAAAAACAAAGAAATAGTGACTAATAATAAATGCATTATCTAG  500

seq1  AGTTGTGTGCGTGTATGAATATTGTACATGTATAGAACAACAAAAATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGTGCGTGTATGAATATTGTACATGTATAGAACAACAAAAATATA  550

seq1  TATTGGAGCTATAAGATAGTTAGGATCTGTGAAATAAGGATGCACTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAGCTATAAGATAGTTAGGATCTGTGAAATAAGGATGCACTTTTG  600

seq1  AATAAAGGCATTTTCCTTGCAGTTTCCCTCTAGTCTGCCTTGTTGGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGGCATTTTCCTTGCAGTTTCCCTCTAGTCTGCCTTGTTGGACTC  650

seq1  TGTGATCTAAAGGAAGTATTCAAGAGCACTAGACAAACTAGTTATACTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCTAAAGGAAGTATTCAAGAGCACTAGACAAACTAGTTATACTTA  700

seq1  ATCACTTTAATATAGCTGTAAATAGCTAATCAAAATCTTGGCAGTGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTTAATATAGCTGTAAATAGCTAATCAAAATCTTGGCAGTGTTTG  750

seq1  GGTGATAGGCAGAGCCCCACGTTTTAATGAACATCCTTGCTAAAGAATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATAGGCAGAGCCCCACGTTTTAATGAACATCCTTGCTAAAGAATCC  800

seq1  ACAAATTTGTTGCTCACAGTATTTATCATCTACCTTTAGTTGTCTCAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTTGTTGCTCACAGTATTTATCATCTACCTTTAGTTGTCTCAAGT  850

seq1  GCCAGCTGTTGTCTTTATTAGTGTGTAAAATATCTGACTGCTTTTGTAAT  900
      ||||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  GCCAGCTGTTGTCTTTATTAGTGTGTAAAATATCTGATTGCTTTTTTAAT  900

seq1  AAAGAAGCTAAGAATCCCATGGC-TCTTTTCCTAGGAAAAAGGAGCAATA  949
      ||||||||| || || ||||||| | ||||| || |||||| || |||  
seq2  AAAGAAGCTTAGTATTCCATGGCTTTTTTTCTTATGAAAAA-GAACAAAT  949

seq1  AAAGTGCTGTTTGTAAAGTCTATGCTTTCTAGTTAATAAAACACACTATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTGTTTGTAAAGTCTATGCTTTCTAGTTAATAAAACACACTATG  999

seq1  TAGGAAGTAAGCGAACTGGAGTTGATC-TGATC-TATCAGGTCCCCTAAA  1047
      ||||||||| ||||||||||||||||| ||||| | ||||||||||||||
seq2  TAGGAAGTAGGCGAACTGGAGTTGATCTTGATCTTTTCAGGTCCCCTAAA  1049

seq1  AACAAGAAAAAATGTACTATCTACTTAATTAC-TTGATTGGTTTTTGTAG  1096
      | ||   |||||||  |||||||||| ||||| ||||| ||   | ||||
seq2  ACCA--GAAAAATGATCTATCTACTTTATTACTTTGATGGG--ATGGTAG  1095

seq1  CTTC-TAGAATCAAATTTAATTCATCAATATTTCTGGTCTTTAACA  1141
      |||| |||||||||  || ||  ||||  ||||||||   ||||||
seq2  CTTCTTAGAATCAA--TTTATCAATCATAATTTCTGG--CTTAACA  1137