BAC Information

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BAC

Clone NameB6Ng01-120K22
Chromosome8 (Build37)
Map Location 35,984,539 - 36,126,197
singlet/doubletdoublet
Overlap geneTnks, LOC666792
Upstream geneRbpms, LOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66, LOC619780, LOC666718, EG234159, LOC666746, Dusp4, LOC675578
Downstream geneLOC666797, LOC666804, Ppp1r3b, Thex1, Mfhas1, LOC100041572, Gm501, Cldn23, LOC671641
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120K22.bB6Ng01-120K22.g
ACCDH924565DH924566
length1,133959
definitionDH924565|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K22, 5' end.DH924566|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,984,539 - 35,985,677)(36,125,671 - 36,126,197)
sequence
gaattcacttcaaaagcaagaggctgggctcgcctgggagggactcttgg
ttaactggatcctttgaggtaggctcagaacacccacctgggccaacctt
cttgtagcagcccactggaaggacatggaaaggaagggtttgctcaagga
gagcaagtacaagtctcactggcaagttcatgcatcttctgttgagacac
tcagcctcacgaactggatgactcttgggaccttctatagagagacagcc
actgttggactagtcggaccaaagtctgtcaggcactctactaaatcccc
tgtatatatgtaaattcctcctcagaaccctgactatgcaatcaaaatga
tcagcttttgcagaaactttgtttttaattccagaaggaaatttcacatt
ggttcatcctggaaatttccaattagtttataaggcatctcaatcataaa
gcagactcaagaatcaaagaaaggtggcttaattgctgagtgatcatgtg
caaagaaatagcgaccatgaaaagcgctgcctgttattcatacttgggac
tgaacaccagatcctgctttaaatggaggtgaaaacatttttacttagca
ggatatgacagttacataatgaaaactttgattcagcaatttttaataag
tggtagaggcaaagtattgaaagcctgactgttcccctcaaaaggaactt
aaatcctcaatccttcgaacaggactgtacttataatggtctactctgaa
agagaaatggttgtttactcccagttgtattctggtttaggcggtctcaa
aagtaactgtcctgcctgaaatgtgtggctttcagacattttgtggtcac
tcctagctctctctgtgacctgaacaaaggcacatcacggagaacaatgt
tgtaacaggaaagaagcaactgctgctagcaaaatccggattaggaaaat
acttaaccatcacagtttattagaagtaaaacaaaaaattactccatgaa
gtttagatgtaaagatatctgcattaagtgacagggtctaacctgttttt
cccactgcagaaaggagtaaatgaggagaaaacagtttcagaaggcgagc
tcacgctgacaataccgttgcctaactggctac
gaattcactggaccttagcaaagagtcctgtgcttactggttttatgtca
acttgacacaaactagttattttggaagagggaacctcagcaaagacaat
gtcctcatcgggtttccctgtgggcaagcttgtggtgctttctcttgatt
gatgtgggaaggcccacatcactgtgtgtggtaccacccctaagctggta
gccctgagtgctatacagtagcaggctgagctaacctgagctagccatga
ggagtgaagtagtcagcagccctcctccaatggcctctgagtcagatctt
gcttccaggttcctgccttgagttcctgccccgacttccctagcaatgga
gtctgaatccattgtaggttgatataagctcttcactttccaagttggtt
ttggtcatggtgttcatcacagcagtgaaaccctcactagaacaggtctt
tcttgcttcctacctgctgactgagtacagccccctgactcaaatatgaa
tccttctgttgctcagttttcacagccttaacccctcatcttccctagca
aagcactaacaacccagccatggttctcttagatagcagttgtctcagta
ggaacagactatacacaagtgttacaagcatccccaggttacctcctgga
atactcagttatcctgtgagggagggcacctggccataggtcagaacctg
gtcagtagaccattcatgaagatgaagaagtaacccccatgaagagcatt
gtctgagcatctatgaccagaccctaccaggctaaggttcagttattagc
caccttccaaagaaagatctcaagactaaaattagagggggggagaccca
aaatatatagtgtcttctccaagttctgagctagaactctttaagatcct
catatatagggcactagagattcttcattcctgcatggagctcttgagcc
tttgtaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_35984539_35985677
seq2: B6Ng01-120K22.b_50_1182

seq1  GAATTCACTTCAAAAGCAAGAGGCTGGGCTCGCCTGGGAGGGACTCTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCAAAAGCAAGAGGCTGGGCTCGCCTGGGAGGGACTCTTGG  50

seq1  TTAACTGGATCCTTTGAGGTAGGCTCAGAACACCCACCTGGGCCAACCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGGATCCTTTGAGGTAGGCTCAGAACACCCACCTGGGCCAACCTT  100

seq1  CTTGTAGCAGCCCACTGGAAGGACATGGAAAGGAAGGGTTTGCTCAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGCAGCCCACTGGAAGGACATGGAAAGGAAGGGTTTGCTCAAGGA  150

seq1  GAGCAAGTACAAGTCTCACTGGCAAGTTCATGCATCTTCTGTTGAGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGTACAAGTCTCACTGGCAAGTTCATGCATCTTCTGTTGAGACAC  200

seq1  TCAGCCTCACGAACTGGATGACTCTTGGGACCTTCTATAGAGAGACAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCACGAACTGGATGACTCTTGGGACCTTCTATAGAGAGACAGCC  250

seq1  ACTGTTGGACTAGTCGGACCAAAGTCTGTCAGGCACTCTACTAAATCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGGACTAGTCGGACCAAAGTCTGTCAGGCACTCTACTAAATCCCC  300

seq1  TGTATATATGTAAATTCCTCCTCAGAACCCTGACTATGCAATCAAAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATATGTAAATTCCTCCTCAGAACCCTGACTATGCAATCAAAATGA  350

seq1  TCAGCTTTTGCAGAAACTTTGTTTTTAATTCCAGAAGGAAATTTCACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTTGCAGAAACTTTGTTTTTAATTCCAGAAGGAAATTTCACATT  400

seq1  GGTTCATCCTGGAAATTTCCAATTAGTTTATAAGGCATCTCAATCATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATCCTGGAAATTTCCAATTAGTTTATAAGGCATCTCAATCATAAA  450

seq1  GCAGACTCAAGAATCAAAGAAAGGTGGCTTAATTGCTGAGTGATCATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTCAAGAATCAAAGAAAGGTGGCTTAATTGCTGAGTGATCATGTG  500

seq1  CAAAGAAATAGCGACCATGAAAAGCGCTGCCTGTTATTCATACTTGGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAATAGCGACCATGAAAAGCGCTGCCTGTTATTCATACTTGGGAC  550

seq1  TGAACACCAGATCCTGCTTTAAATGGAGGTGAAAACATTTTTACTTAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACCAGATCCTGCTTTAAATGGAGGTGAAAACATTTTTACTTAGCA  600

seq1  GGATATGACAGTTACATAATGAAAACTTTGATTCAGCAATTTTTAATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGACAGTTACATAATGAAAACTTTGATTCAGCAATTTTTAATAAG  650

seq1  TGGTAGAGGCAAAGTATTGAAAGCCTGACTGTTCCCCTCAAAAGGAACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAGGCAAAGTATTGAAAGCCTGACTGTTCCCCTCAAAAGGAACTT  700

seq1  AAATCCTCAATCCTTCGAACAGGACTGTACTTATAATGGTCTACTCTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTCAATCCTTCGAACAGGACTGTACTTATAATGGTCTACTCTGAA  750

seq1  AGAGAAATGGTTGTTTACTCCCAGTTGTATTCTGGTTTAGGCGGTCTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATGGTTGTTTACTCCCAGTTGTATTCTGGTTTAGGCGGTCTCAA  800

seq1  AAGTAACTGTCCTGCCTGAAATGTGTGGCTTTCAGACATTTTGTGGTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACTGTCCTGCCTGAAATGTGTGGCTTTCAGACATTTTGTGGTCAC  850

seq1  TCCTAGCTCTCTCTGTGACCTGAACAAAGGCACATCACGGAGAACAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCTCTCTCTGTGACCTGAACAAAGGCACATCACGGAGAACAATGT  900

seq1  TGTAACAGGAAAGAAGCAACTGCTGCTAGCAAAATCCGGATTA-GAAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGTAACAGGAAAGAAGCAACTGCTGCTAGCAAAATCCGGATTAGGAAAAT  950

seq1  ACTTAACCATCACAAGTTTATTAGAAGTAAAACAAAAAATTAACTCCATG  999
      ||||||||||||| ||||||||||||||||||||||||||| ||||||||
seq2  ACTTAACCATCAC-AGTTTATTAGAAGTAAAACAAAAAATT-ACTCCATG  998

seq1  AAGTTTAGATGTAAAGATATCTGCATTAAAGTGACAGGGGTCTAAACCTG  1049
      ||||||||||||||||||||||||||| |||||||| |||||| ||||||
seq2  AAGTTTAGATGTAAAGATATCTGCATT-AAGTGACA-GGGTCT-AACCTG  1045

seq1  TTTTTCCCACTGCAGAAAGGAGTAAATGAAGGGAGAAAACAG-TTCAGAG  1098
      |||||||||||||||||||||||||||||  ||||||||||| |||||| 
seq2  TTTTTCCCACTGCAGAAAGGAGTAAATGA--GGAGAAAACAGTTTCAGAA  1093

seq1  GCCGAGCTTCACGGCTGACAATACCGTTGCCT-ACTGGCTAC  1139
      | ||||| |||| ||||||||||||||||||| |||||||||
seq2  GGCGAGC-TCAC-GCTGACAATACCGTTGCCTAACTGGCTAC  1133

seq1: chr8_36125671_36126197
seq2: B6Ng01-120K22.g_70_596 (reverse)

seq1  GGCTGTGAAAACTGAGCAACAGAAGGATTCATATTTGAGTCAGGGGGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGAAAACTGAGCAACAGAAGGATTCATATTTGAGTCAGGGGGCTG  50

seq1  TACTCAGTCAGCAGGTAGGAAGCAAGAAAGACCTGTTCTAGTGAGGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGTCAGCAGGTAGGAAGCAAGAAAGACCTGTTCTAGTGAGGGTTT  100

seq1  CACTGCTGTGATGAACACCATGACCAAAACCAACTTGGAAAGTGAAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTGTGATGAACACCATGACCAAAACCAACTTGGAAAGTGAAGAGC  150

seq1  TTATATCAACCTACAATGGATTCAGACTCCATTGCTAGGGAAGTCGGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCAACCTACAATGGATTCAGACTCCATTGCTAGGGAAGTCGGGGC  200

seq1  AGGAACTCAAGGCAGGAACCTGGAAGCAAGATCTGACTCAGAGGCCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTCAAGGCAGGAACCTGGAAGCAAGATCTGACTCAGAGGCCATTG  250

seq1  GAGGAGGGCTGCTGACTACTTCACTCCTCATGGCTAGCTCAGGTTAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGGCTGCTGACTACTTCACTCCTCATGGCTAGCTCAGGTTAGCTC  300

seq1  AGCCTGCTACTGTATAGCACTCAGGGCTACCAGCTTAGGGGTGGTACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTACTGTATAGCACTCAGGGCTACCAGCTTAGGGGTGGTACCAC  350

seq1  ACACAGTGATGTGGGCCTTCCCACATCAATCAAGAGAAAGCACCACAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGATGTGGGCCTTCCCACATCAATCAAGAGAAAGCACCACAAGC  400

seq1  TTGCCCACAGGGAAACCCGATGAGGACATTGTCTTTGCTGAGGTTCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCACAGGGAAACCCGATGAGGACATTGTCTTTGCTGAGGTTCCCTC  450

seq1  TTCCAAAATAACTAGTTTGTGTCAAGTTGACATAAAACCAGTAAGCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAATAACTAGTTTGTGTCAAGTTGACATAAAACCAGTAAGCACAG  500

seq1  GACTCTTTGCTAAGGTCCAGTGAATTC  527
      |||||||||||||||||||||||||||
seq2  GACTCTTTGCTAAGGTCCAGTGAATTC  527