BAC Information

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BAC

Clone NameB6Ng01-122A04
Chromosome8 (Build37)
Map Location 58,740,670 - 58,741,867
singlet/doubletsinglet
Overlap genenone
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356, LOC664916, Adam29, Glra3, LOC664812
Downstream geneHpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433, LOC654355
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122A04.bB6Ng01-122A04.g
ACCDH925548DH925549
length1,196699
definitionDH925548|Mus musculus domesticus DNA, BAC clone: B6Ng01-122A04, 5' end.DH925549|Mus musculus domesticus DNA, BAC clone: B6Ng01-122A04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctcttaatttatatcaggtatttttcacaatgacaaagattc
tgactaatatatatttcttattaaatttcttagttttgcaaattaatcaa
ctattatagtgtgcagggttagaagattggtggcaaaaaatcatgtgcta
ttgatacattagtgtaatagtggcacaaagcttatgggggtaaccaacca
ataactgacttcatctaagtcccactccatgagacagacaccataacgtg
tgtacatgcacctatctgtgtggagatgagagggaaactcaggttgttga
ttgtgacaagggactttatacctgcagagacatcttgcaaacagtaattt
ttatatgtacacattctttactcattagcatagaaaaggcatatttttat
agacaatcagaaaagtatgttttggagtaaggaagactctctaacgagtt
tgccttgcagtaaaaattttggaaatgtgtcagaaatttaaagaatgttg
taataaattcaaattataccttgtctaaatttctaacatgctgaagtttt
gagttttgaattgcaaagttttgagaaagaatttaacttctctcagttac
ttcagaacaacacttttgaaagtgttaaaaaaaaacaatttcatagcaat
tttagatctgtagaaaaactgagtagaataaagacagccctcacaccctg
tccctcagcctcttccatccttctgcatatttatttctttcttctcttag
aatgttacatttgttctagttgacaatccagtatggagatacagttatag
tttatatcagagttcactaattgttttgctcagtttttaaaatgcacgat
gtttattcattttaataatatgtagaacaatctcactattgtgaaaatac
tatttatccctctaagtaaataactgacgactacagatttttaaattttc
caaacttttaccttaaactaagcatggtggttcacatctgtccttttagc
tacagaatgtgaaggctggttgattgtgagttcaaggccagctgaactac
atatgtacctttctggattacatagcagtattctgcttctcctcctgtct
gtcctccctcctcccccacatacttcagaaatttattttggtattataac
atttctagaaagaacttcttctacctataaataatcttggtcttta

gaattccaggggggaggggggaggaactatcatatcatctgcaaatagtg
atagctttatttcttctttaccaatttgtataacctagatctctttttgt
tgccttattgttctagctactttaagtagtatattgaatagatatgggga
gagtgggcatccttgtcttgttcccagtttccgtgggattgcttcaagta
tgtcttcatttaatttgatattggctgctggtttaaaatgctttcattat
gtttatgtatgggccttgacttcttgatctctctaatagttttaacatga
aggggtgttatattttgtcaaatgctttttctgcatctatgtgatttttt
tctttgtttacatagtggattatattaattgatttttatatattaaacca
accttgcatccctgggatgatgtctacttgaccatggtaaatgaaggttt
taacgtgttcttggattcgctttgcaagaattttattgagtatttttgca
ttgatattcataagcaagattggtcttaatttctcttatttggttgggtc
cctgtgtggttgagatatcagaataattgtggcatcatagaatgagttag
ggagagttccttcagtttccattttatggaatagtttgaggaaaattgat
atcagtcttctttgaaggtctgggaaaaattctgcactaaatccatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58740670_58741867
seq2: B6Ng01-122A04.b_50_1245 (reverse)

seq1  TAAAGACC-AGATTATTTATAGGTAGAAGAAG-TCTTTCTAGAAATGTTA  48
      |||||||| ||||||||||||||||||||||| |||||||||||||||||
seq2  TAAAGACCAAGATTATTTATAGGTAGAAGAAGTTCTTTCTAGAAATGTTA  50

seq1  T-ATA-CAAAATAATATTCTGAAAGGTATGTGTGAGA-GAGAGAGAACAA  95
      | ||| ||||||||  |||||||  ||||||| | || ||| ||| || |
seq2  TAATACCAAAATAAATTTCTGAA--GTATGTGGGGGAGGAGGGAGGAC-A  97

seq1  GACAGAGAGAGAAGCAGAATACTGCTATGTAATCCAGAAAGGTACATATG  145
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAGGAGAAGCAGAATACTGCTATGTAATCCAGAAAGGTACATATG  147

seq1  TAGTTCAGCCTGGCCTTGAACTCACAATCAACCAGCCTTCACATTTCTGT  195
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  TAGTTCAG-CTGGCCTTGAACTCACAATCAACCAGCCTTCACA-TTCTGT  195

seq1  AGCTAAAAGGACAGATGTGAACCACCATGCTTAGTTTAAGGTAAAAGTTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGCTAAAAGGACAGATGTGAACCACCATGCTTAGTTTAAGGTAAAAG-TT  244

seq1  TGGAAAATTTTAAAAATCTGTAGTCGTCAGTTATTTACTTAGAGGGATAA  295
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAA-TTTAAAAATCTGTAGTCGTCAGTTATTTACTTAGAGGGATAA  293

seq1  ATAGTATTTTCACAATAGTGAGATTGTTCTACATATTATTAAAATGAATA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATTTTCACAATAGTGAGATTGTTCTACATATTATTAAAATGAATA  343

seq1  AACATCGTGCATTTTAAAAACTGAGCAAAACAATTAGTGAACTCTGATAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCGTGCATTTTAAAAACTGAGCAAAACAATTAGTGAACTCTGATAT  393

seq1  AAACTATAACTGTATCTCCATACTGGATTGTCAACTAGAACAAATGTAAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATAACTGTATCTCCATACTGGATTGTCAACTAGAACAAATGTAAC  443

seq1  ATTCTAAGAGAAGAAAGAAATAAATATGCAGAAGGATGGAAGAGGCTGAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAGAGAAGAAAGAAATAAATATGCAGAAGGATGGAAGAGGCTGAG  493

seq1  GGACAGGGTGTGAGGGCTGTCTTTATTCTACTCAGTTTTTCTACAGATCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGGTGTGAGGGCTGTCTTTATTCTACTCAGTTTTTCTACAGATCT  543

seq1  AAAATTGCTATGAAATTGTTTTTTTTTAACACTTTCAAAAGTGTTGTTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGCTATGAAATTGTTTTTTTTTAACACTTTCAAAAGTGTTGTTCT  593

seq1  GAAGTAACTGAGAGAAGTTAAATTCTTTCTCAAAACTTTGCAATTCAAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAACTGAGAGAAGTTAAATTCTTTCTCAAAACTTTGCAATTCAAAA  643

seq1  CTCAAAACTTCAGCATGTTAGAAATTTAGACAAGGTATAATTTGAATTTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAACTTCAGCATGTTAGAAATTTAGACAAGGTATAATTTGAATTTA  693

seq1  TTACAACATTCTTTAAATTTCTGACACATTTCCAAAATTTTTACTGCAAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACATTCTTTAAATTTCTGACACATTTCCAAAATTTTTACTGCAAG  743

seq1  GCAAACTCGTTAGAGAGTCTTCCTTACTCCAAAACATACTTTTCTGATTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTCGTTAGAGAGTCTTCCTTACTCCAAAACATACTTTTCTGATTG  793

seq1  TCTATAAAAATATGCCTTTTCTATGCTAATGAGTAAAGAATGTGTACATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAAATATGCCTTTTCTATGCTAATGAGTAAAGAATGTGTACATA  843

seq1  TAAAAATTACTGTTTGCAAGATGTCTCTGCAGGTATAAAGTCCCTTGTCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTACTGTTTGCAAGATGTCTCTGCAGGTATAAAGTCCCTTGTCA  893

seq1  CAATCAACAACCTGAGTTTCCCTCTCATCTCCACACAGATAGGTGCATGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAACAACCTGAGTTTCCCTCTCATCTCCACACAGATAGGTGCATGT  943

seq1  ACACACGTTATGGTGTCTGTCTCATGGAGTGGGACTTAGATGAAGTCAGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGTTATGGTGTCTGTCTCATGGAGTGGGACTTAGATGAAGTCAGT  993

seq1  TATTGGTTGGTTACCCCCATAAGCTTTGTGCCACTATTACACTAATGTAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTTGGTTACCCCCATAAGCTTTGTGCCACTATTACACTAATGTAT  1043

seq1  CAATAGCACATGATTTTTTGCCACCAATCTTCTAACCCTGCACACTATAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCACATGATTTTTTGCCACCAATCTTCTAACCCTGCACACTATAA  1093

seq1  TAGTTGATTAATTTGCAAAACTAAGAAATTTAATAAGAAATATATATTAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGATTAATTTGCAAAACTAAGAAATTTAATAAGAAATATATATTAG  1143

seq1  TCAGAATCTTTGTCATTGTGAAAAATACCTGATATAAATTAAGAGAAGAA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATCTTTGTCATTGTGAAAAATACCTGATATAAATTAAGAGAAGAA  1193

seq1  TTC  1198
      |||
seq2  TTC  1196


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