BAC Information

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BAC

Clone NameB6Ng01-122O23
Chromosome8 (Build37)
Map Location 55,872,636 - 55,873,550
singlet/doubletsinglet
Overlap genenone
Upstream geneVegfc, Spcs3, Asb5, Spata4, Wdr17
Downstream geneGpm6a, LOC667624, LOC100040156, LOC100040382, LOC100040392, EG546212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122O23.bB6Ng01-122O23.g
ACCDH926236DH926237
length1,1961,152
definitionDH926236|Mus musculus domesticus DNA, BAC clone: B6Ng01-122O23, 5' end.DH926237|Mus musculus domesticus DNA, BAC clone: B6Ng01-122O23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgaaatgtgaataaaataaaaaataagaggaaacaaacaaa
caaacaaacaaccctcaacaaatatgagacaagaaacctctaaagatacc
attgagttcattgtctgttggccatctacttttcgacatgcaatctaccc
ttaggagtagtttgtttccctagtatgttttccatcttgtgatgtgggtc
ttgagtcaaatcagatactggttggttacccccacaaactttgagccatc
attgcactagcatatcttgcagataggataccattatagattaaggggtt
tgtcattgggttggtgtttatatttctttttggtagcaggcagagtttct
ccctgtaccaaagatgctagtgaacattgggtaaaggagctatgtaaggc
accagctgaactcctccattttcaatgagttctagagtccttatattctg
caatggggtcttgccatcagtttgtggagagcaaaataaaaccttagcag
caacctgaattatttgatggttcccgtgggatccttttggccaattagat
gtaacacactcctggtactagaatctttggtgacaaatgatagccacctg
aggatcttccccctttacttggcaatttcatttagatcgtcttcttatat
gtatatattttaggaaacttctactgtatttcattttcacactactcctc
aataacctttactttccctgtattccctcccttactcccttccttccctc
tcctctcttgatcctcctattgtttgtttgtttttgttttgcttttccaa
gatgatagctcactatgtagtcctgggtgtcctggaactgactatgaata
ctaatctggctttaaatccagtgacccgctagctggtattaaaggtgtgc
accccgtgccagactctttaaatctagttttgaaagtaaaaataaattta
ctcataaaaatgtttgatagcatctaaaggacttttaaatggactaataa
cacccatttcccgtgactgtattacactatttattcttagtaataagtag
aaggattataataatttgaaaatccaagcctagtaggtgaatccaaaagc
cagggaaccctatgcttgcatcccctactcaggggaatgtagaagtatcc
agcctacctcctgtccctgaaatagctgatctatgcctattctgac
gaattcaacaccccactctcatcaatggacagatcatggaaagacaaact
aaatagagacacattaaaaataatagaagttatggaccaaatggatttaa
cagatatctatagaacacttcatcctaaaacaaaagaatatatcatcttc
tcagcacctcatggtaccttctccaaaactgaccatgtaattagtcacaa
aacagacctcaacaaatacaagaaaattgaaataattccattcatcctat
catatcaccatggaataaggttgctcttcaatagtaccaaaaacaacaga
aagcccacatgaacctggaagctgaacaatgccctactcaatgataactt
gatcaaggaagaaagaaagaaagaaattaaagactttttagaatttaatg
aaaatgaaggcaagcatacccaaacttatgggacacaatgaaagcagtgc
taagaggaaaactaacagtcctgagtgcctccaaaaagaaatttgacaga
gtataaactaccacctggacagcacacctgaaagctctagaacaaaaaga
agcaaatacacccaagaggagtagacatagacagcaggaaataattgaac
tcagggctgaaatcaaccaagtagaaacaaaaaaagaactatatgaagat
caacaaaaccaggagctaggtcattgagaaaatcaacaagataaataaac
ccttaccagaataagcagagggcacagagacagtatccaaattaacaaaa
gcaaaaatgaaaatggaggtataacaacagaaactgaggaaactcaaaaa
tcatcagatcctaatacaaagcttgaattcaaaagaactggaaaacctgg
atgaaatgaacattttctagacagataccatacaaatgcctacataatca
gatcaaataaaccatctaaattcacataactctaagaaatagagcagtca
ttaaatctccataaaaaacacacacaaacacaacacaccacacacatgac
aagcccaggcacatggttagtgcagatctatccgaccctaaagagactaa
taccaatactcttacctatcacggaaataggacgaagaacttacaatcat
ctaatgaatctagtacattgattccttggaatggaatggtctggttaatc
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_55872636_55873550
seq2: B6Ng01-122O23.b_323_1243

seq1  GGATACCATTATAGATTAAGGGGTTTGTCATTGGGTTGGTGTTTATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACCATTATAGATTAAGGGGTTTGTCATTGGGTTGGTGTTTATATTT  50

seq1  CTTTTTGGTAGCAGGCAGAGTTTCTCCCTGTACCAAAGATGCTAGTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGGTAGCAGGCAGAGTTTCTCCCTGTACCAAAGATGCTAGTGAAC  100

seq1  ATTGGGTAAAGGAGCTATGTAAGGCACCAGCTGAACTCCTCCATTTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTAAAGGAGCTATGTAAGGCACCAGCTGAACTCCTCCATTTTCAA  150

seq1  TGAGTTCTAGAGTCCTTATATTCTGCAATGGGGTCTTGCCATCAGTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTAGAGTCCTTATATTCTGCAATGGGGTCTTGCCATCAGTTTGT  200

seq1  GGAGAGCAAAATAAAACCTTAGCAGCAACCTGAATTATTTGATGGTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCAAAATAAAACCTTAGCAGCAACCTGAATTATTTGATGGTTCCC  250

seq1  GTGGGATCCTTTTGGCCAATTAGATGTAACACACTCCTGGTACTAGAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATCCTTTTGGCCAATTAGATGTAACACACTCCTGGTACTAGAATC  300

seq1  TTTGGTGACAAATGATAGCCACCTGAGGATCTTCCCCCTTTACTTGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGACAAATGATAGCCACCTGAGGATCTTCCCCCTTTACTTGGCAA  350

seq1  TTTCATTTAGATCGTCTTCTTATATGTATATATTTTAGGAAACTTCTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTAGATCGTCTTCTTATATGTATATATTTTAGGAAACTTCTACT  400

seq1  GTATTTCATTTTCACACTACTCCTCAATAACCTTTACTTTCCCTGTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCATTTTCACACTACTCCTCAATAACCTTTACTTTCCCTGTATTC  450

seq1  CCTCCCTTACTCCCTTCCTTCCCTCTCCTCTCTTGATCCTCCTATTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTACTCCCTTCCTTCCCTCTCCTCTCTTGATCCTCCTATTGTTT  500

seq1  GTTTGTTTTTGTTTTGCTTTTCCAAGATGATAGCTCACTATGTAGTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTTGTTTTGCTTTTCCAAGATGATAGCTCACTATGTAGTCCTG  550

seq1  GGTGTCCTGGAACTGACTATGAATACTAATCTGGCTTTAAATCCAGTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCTGGAACTGACTATGAATACTAATCTGGCTTTAAATCCAGTGAC  600

seq1  CCGCTAGCTGGTATTAAAGGTGTGCACCCCGTGCCAGACTCTTTAAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTAGCTGGTATTAAAGGTGTGCACCCCGTGCCAGACTCTTTAAATCT  650

seq1  AGTTTTGAAAGTAAAAATAAATTTACTCATAAAAATGTTTGATAGCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGAAAGTAAAAATAAATTTACTCATAAAAATGTTTGATAGCATCT  700

seq1  -AAGGACTTTTTAAATGGACTAATAACACCCA-TTCCCGTGACTGTATTA  748
       |||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  AAAGGAC-TTTTAAATGGACTAATAACACCCATTTCCCGTGACTGTATTA  749

seq1  CACTTATTATTCTTAGTAATAAGTAGAAGTATTAT-ATAA-TTGAAAAT-  795
      ||||  ||||||||||||||||||||||| ||||| |||| |||||||| 
seq2  CACTATTTATTCTTAGTAATAAGTAGAAGGATTATAATAATTTGAAAATC  799

seq1  CAAG-CTAGTAAGTGAAT-CAAAAGCAAGGAAACACTATGCTTGCAT--C  841
      |||| |||||| |||||| ||||||| ||| ||| ||||||||||||  |
seq2  CAAGCCTAGTAGGTGAATCCAAAAGCCAGGGAACCCTATGCTTGCATCCC  849

seq1  CTCATCAGGGAGATGTCAGGAGGTAACCAGGCATACTTCCTGTCACTGAT  891
      ||  ||||||  ||||   || ||| ||| || ||| ||||||| |||| 
seq2  CTACTCAGGGGAATGT--AGAAGTATCCA-GCCTACCTCCTGTCCCTGAA  896

seq1  AATGCTGATCTATG-CTATTCTGAC  915
      |  ||||||||||| ||||||||||
seq2  ATAGCTGATCTATGCCTATTCTGAC  921