BAC Information

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BAC

Clone NameB6Ng01-124D22
Chromosome8 (Build37)
Map Location 65,497,396 - 65,626,298
singlet/doubletdoublet
Overlap geneSpock3
Upstream geneBC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
Downstream geneLOC384831, EG244495, Tll1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124D22.bB6Ng01-124D22.g
ACCDH927200DH927201
length1,0981,018
definitionDH927200|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D22, 5' end.DH927201|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,625,205 - 65,626,298)(65,497,396 - 65,498,321)
sequence
gaattctgtgaacattatgaaagaagaagtttgagactaaagcaaatgag
aagatgttgtaatgtaacctttggaaagggaattagggaaaagatctttg
aataacaagactttcccaacactttaggctacagacaggggatccatttc
tttttagtgttaggataagataatatcagtataaaaatctgatattatag
tttctatctcttttcattaactattatacctcagcatgttctcatacctc
caaatgcaatctgttatctcccatattagctttgtcattgatcaacctgc
atgccaaatttctagttcctaaagggctgtatacacatggagtttgtgct
aacttctcaagtcatataaaatattaatatcctgtcacctgaacactaaa
tacagtttacataaaacactgaaacttgccagtttaaattctagagatct
ttctcattctaatggtcactaaaggaaattcagctgctacttctcaaggt
ggtttaatggctttcactaagcaatatttgtactttttgtttctgaccat
ccttaccatggaaaatggaaaccaagtttccttttgtatgtagtttatta
aaattatctttaaatttatttacatatttatgtatttatttatttatcaa
ttgattaattgattttgtgagggggtcagattataggtatgtgtatgcca
ttgagcattactggaagccagaaggtgccttgcaagattcagttctcttt
ttctatgatgttggttgtaagaattcaatgaaggtcaccaagcttattga
taatgtgccttgagtcatcttcaggggatatagctaagtcatcacggtgg
acatagcatggatatggataagcttaaatgtcaatctcagcaaatagagt
tgtgggattcagtgtctacacaggccagaaaggggcatcataaccccttg
caatggagttaccagtagcagctgtctcatggtagccactgaagaacaat
acctggtttactaacgagcagaaaaactctctaaactactgaaaatctac
tctaagcctaattcctgcttataattaaataattgggccaagctctgc
gaattcacgcagttgaatccttctcaacagtctgttttacgggaacactt
cattaccatgacccgcagttctggttcctgaatgagggatcttccttgcg
ccggtgatggtaaccgtcccaggttttctcgtctcgggatttctcgtccc
aggtcttctcgtcccgggtctcagcaccaactcttacacgcgttctcgac
cggccaggaaagacgcagcaaaccagaatcttctgcggcaaaactttatt
gcttacatcttcaggagcaagagtgcaagagagcaagagctctattgctt
acatctttaggagccagagcgcaagagcgcaagagcgcaagagcgcaaga
gccagagcaagagagcaaaaggagagaatggcgaaaccccgtccctttta
aggagaattattctccgcctaggacgtattactccttgattggctgcagc
ccatcggccgagttgtcgtcacggggaaggcagagcacatggggtggaaa
actacccttggcacatgcgcagattatttgtttaccacttagaacacagg
atgtcagcgccatcttgtaacggcgaatgtgagggcggctccccacacca
aagtagagaagaatcacaaatattccaactcttcagagccaagatttgaa
ttatttaggaaccatgagaatattggcccatagacattagagaaatggcc
agcctttgaaagaatttgcttaatgtgaacatttttttgaacataattaa
agtatactactatgtaaagctattgtattttcattaaagtaaccaacagg
agagacatttgctaagagtagctgcttgttatgcaagcttactagtatat
atcttatatatacgtatatatgtttagtagatgcttataatttgaaacaa
agtctatttttggtcagttaatatattctataattacaggatagtgaaac
aaatatcactctataatattgcctcacttaaatgtaaaagcaaataaaat
ggatctctgtaatagatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65625205_65626298
seq2: B6Ng01-124D22.b_44_1141 (reverse)

seq1  GCAGAGCTTGGACCAAATAATTTATTTATAAGCAAGAATTAGGACTAGAG  50
      ||||||||||| || ||| ||||| ||||||||| ||||||||  |||||
seq2  GCAGAGCTTGG-CCCAATTATTTAATTATAAGCAGGAATTAGGCTTAGAG  49

seq1  -AGACTTTTCAGTAG-TTAGAGAG-TTTTCTGCTCTGTTAGTGAAACCAG  97
       ||| |||||||||| |||||||| |||||||||| |||||| |||||||
seq2  TAGA-TTTTCAGTAGTTTAGAGAGTTTTTCTGCTC-GTTAGT-AAACCAG  96

seq1  GTTTTGTTC-TCAGTGGCTA-CATGGGACAGCTGCTACTGGTAACTCCAT  145
      || |||||| |||||||||| |||| ||||||||||||||||||||||||
seq2  GTATTGTTCTTCAGTGGCTACCATGAGACAGCTGCTACTGGTAACTCCAT  146

seq1  TGCAAGGGGTTTTGATGCCCCTTTCTGGCCTGTGTAGACACTGAAT-CCA  194
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  TGCAAGGGGTTATGATGCCCCTTTCTGGCCTGTGTAGACACTGAATCCCA  196

seq1  CAACTCTATTTGCTGAGATTGACATTTAAGCTTATCCATATCCATGCTAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTATTTGCTGAGATTGACATTTAAGCTTATCCATATCCATGCTAT  246

seq1  GT-CACCGTGATGACTTAGCTATATCCCCTGAAGATGACTCAAGGCAC-T  292
      || ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTCCACCGTGATGACTTAGCTATATCCCCTGAAGATGACTCAAGGCACAT  296

seq1  TATCAATAAGCTTGGTGACCTTCATTGAATTCTTACAACCAACATCATAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATAAGCTTGGTGACCTTCATTGAATTCTTACAACCAACATCATAG  346

seq1  AAAAAGAGAACTGAATCTTGCAAGGCACCTTCTGGCTTCCAGTAATGCTC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGAACTGAATCTTGCAAGGCACCTTCTGGCTTCCAGTAATGCTC  396

seq1  AATGGCATACACATACCTATAATCTGACCCCCTCACAAAATCAATTAATC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCATACACATACCTATAATCTGACCCCCTCACAAAATCAATTAATC  446

seq1  AATTGATAAATAAATAAATACATAAATATGTAAATAAATTTAAAGATAAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATAAATAAATAAATACATAAATATGTAAATAAATTTAAAGATAAT  496

seq1  TTTAATAAACTACATACAAAAGGAAACTTGGTTTCCATTTTCCATGGTAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAAACTACATACAAAAGGAAACTTGGTTTCCATTTTCCATGGTAA  546

seq1  GGATGGTCAGAAACAAAAAGTACAAATATTGCTTAGTGAAAGCCATTAAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTCAGAAACAAAAAGTACAAATATTGCTTAGTGAAAGCCATTAAA  596

seq1  CCACCTTGAGAAGTAGCAGCTGAATTTCCTTTAGTGACCATTAGAATGAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTGAGAAGTAGCAGCTGAATTTCCTTTAGTGACCATTAGAATGAG  646

seq1  AAAGATCTCTAGAATTTAAACTGGCAAGTTTCAGTGTTTTATGTAAACTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTCTAGAATTTAAACTGGCAAGTTTCAGTGTTTTATGTAAACTG  696

seq1  TATTTAGTGTTCAGGTGACAGGATATTAATATTTTATATGACTTGAGAAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGTGTTCAGGTGACAGGATATTAATATTTTATATGACTTGAGAAG  746

seq1  TTAGCACAAACTCCATGTGTATACAGCCCTTTAGGAACTAGAAATTTGGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCACAAACTCCATGTGTATACAGCCCTTTAGGAACTAGAAATTTGGC  796

seq1  ATGCAGGTTGATCAATGACAAAGCTAATATGGGAGATAACAGATTGCATT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGTTGATCAATGACAAAGCTAATATGGGAGATAACAGATTGCATT  846

seq1  TGGAGGTATGAGAACATGCTGAGGTATAATAGTTAATGAAAAGAGATAGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTATGAGAACATGCTGAGGTATAATAGTTAATGAAAAGAGATAGA  896

seq1  AACTATAATATCAGATTTTTATACTGATATTATCTTATCCTAACACTAAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAATATCAGATTTTTATACTGATATTATCTTATCCTAACACTAAA  946

seq1  AAGAAATGGATCCCCTGTCTGTAGCCTAAAGTGTTGGGAAAGTCTTGTTA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGGATCCCCTGTCTGTAGCCTAAAGTGTTGGGAAAGTCTTGTTA  996

seq1  TTCAAAGATCTTTTCCCTAATTCCCTTTCCAAAGGTTACATTACAACATC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGATCTTTTCCCTAATTCCCTTTCCAAAGGTTACATTACAACATC  1046

seq1  TTCTCATTTGCTTTAGTCTCAAACTTCTTCTTTCATAATGTTCACAGAAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTTGCTTTAGTCTCAAACTTCTTCTTTCATAATGTTCACAGAAT  1096

seq1  TC  1094
      ||
seq2  TC  1098

seq1: chr8_65497396_65498321
seq2: B6Ng01-124D22.g_168_1085

seq1  CCGGTGATGGTAACCGTCCCAGGTTTTCTCGTCTCGGGATTTCTCGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGATGGTAACCGTCCCAGGTTTTCTCGTCTCGGGATTTCTCGTCCC  50

seq1  AGGTCTTCTCGTCCCGGGTCTCAGCACCAACTCTTACACGCGTTCTCGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTCTCGTCCCGGGTCTCAGCACCAACTCTTACACGCGTTCTCGAC  100

seq1  CGGCCAGGAAAGACGCAGCAAACCAGAATCTTCTGCGGCAAAACTTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCAGGAAAGACGCAGCAAACCAGAATCTTCTGCGGCAAAACTTTATT  150

seq1  GCTTACATCTTCAGGAGCAAGAGTGCAAGAGAGCAAGAGCTCTATTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACATCTTCAGGAGCAAGAGTGCAAGAGAGCAAGAGCTCTATTGCTT  200

seq1  ACATCTTTAGGAGCCAGAGCGCAAGAGCGCAAGAGCGCAAGAGCGCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTTAGGAGCCAGAGCGCAAGAGCGCAAGAGCGCAAGAGCGCAAGA  250

seq1  GCCAGAGCAAGAGAGCAAAAGGAGAGAATGGCGAAACCCCGTCCCTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGCAAGAGAGCAAAAGGAGAGAATGGCGAAACCCCGTCCCTTTTA  300

seq1  AGGAGAATTATTCTCCGCCTAGGACGTATTACTCCTTGATTGGCTGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATTATTCTCCGCCTAGGACGTATTACTCCTTGATTGGCTGCAGC  350

seq1  CCATCGGCCGAGTTGTCGTCACGGGGAAGGCAGAGCACATGGGGTGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCGGCCGAGTTGTCGTCACGGGGAAGGCAGAGCACATGGGGTGGAAA  400

seq1  ACTACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGG  450

seq1  ATGTCAGCGCCATCTTGTAACGGCGAATGTGAGGGCGGCTCCCCACACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGCGCCATCTTGTAACGGCGAATGTGAGGGCGGCTCCCCACACCA  500

seq1  AAGTAGAGAAGAATCACAAATATTCCAACTCTTCAGAGCCAAGATTTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAGAAGAATCACAAATATTCCAACTCTTCAGAGCCAAGATTTGAA  550

seq1  TTATTTAGGAACCATGAGAATATTGGCCCATAGACATTAGAGAAATGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGGAACCATGAGAATATTGGCCCATAGACATTAGAGAAATGGCC  600

seq1  AGCCTTTGAAAAGAATTTGCTTAATGTGAACATTTTTTTGAACATAATTA  650
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTG-AAAGAATTTGCTTAATGTGAACATTTTTTTGAACATAATTA  649

seq1  AAGTATACTACTATGTAAAGCTATTTGTATTTTCATTAAAGTAACCAACA  700
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGTATACTACTATGTAAAGCTA-TTGTATTTTCATTAAAGTAACCAACA  698

seq1  GGAGAGACATTTGCTAAGAGTAGCTGCTTGTTATGCAAGCTTACTAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGACATTTGCTAAGAGTAGCTGCTTGTTATGCAAGCTTACTAGTAT  748

seq1  ATATCTTATATATACGTATATATGTTTAGTAGATGCTTATAATTTTAAAA  800
      |||||||||||||||||||||||||||||||||||||||||| ||| |||
seq2  ATATCTTATATATACGTATATATGTTTAGTAGATGCTTATAA-TTTGAAA  797

seq1  CAAAGTCTATTTTTGGTCAGTTAAATATATTCTATTAAATTACAGGATAG  850
      |||||||||||||||||||||| ||||||||||||  |||||||||||||
seq2  CAAAGTCTATTTTTGGTCAGTT-AATATATTCTAT--AATTACAGGATAG  844

seq1  TGAAACAAATATCACTCTATAATATTTCCTCACTAAAATGTTAAAAGCAA  900
      |||||||||||||||||||||||||| ||||||| ||||| |||||||||
seq2  TGAAACAAATATCACTCTATAATATTGCCTCACTTAAATG-TAAAAGCAA  893

seq1  ATAAAAT-GATCTTCTGTTATTAGATT  926
      ||||||| |||| |||| || ||||||
seq2  ATAAAATGGATC-TCTG-TAATAGATT  918