BAC Information

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BAC

Clone NameB6Ng01-126A02
Chromosome8 (Build37)
Map Location 69,057,601 - 69,058,705
singlet/doubletsinglet
Overlap genenone
Upstream geneMarch1, LOC100040986, 1810029B16Rik, Tktl2
Downstream geneNpy5r, Npy1r, BC053440, LOC665453, Nat1, Nat2, LOC100041265, Nat3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126A02.bB6Ng01-126A02.g
ACCDH928486DH928487
length1,094229
definitionDH928486|Mus musculus domesticus DNA, BAC clone: B6Ng01-126A02, 5' end.DH928487|Mus musculus domesticus DNA, BAC clone: B6Ng01-126A02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctcagtgggcagtgttatccacagggactgatgaccagagtt
ccatccccaggacttacacaacctcaggaggtatgtgacacccatagatt
gtcctctgatgtctacaggcacactgtggtacatatgcagccacatatac
atgtacacaactcatacaacatagatatattaatataaaaattctctttg
aagttgagttgcaattgttctttctcttataacaagagacaccattagac
tggagaaaaaaatgagctatttccttagcaggaaattgtgaggcaatcat
tgctaaatgttttctagtagataattctgaagataggcaaagtgagtgtc
atgatttgactaaaaagtggggttgattcagtagctgtgtcttcgtattt
gcctagggaatagaaggaaaggggtggtcctagagatgtaactgcagaga
agagtagcagtcacttaggtgctctctgttcctgcaaagctgagactgca
gtgctgggcagtacaactctgttaggggctgcacaacactcttctattta
tctctatgcccaaacctgactaacgatggtcttgccctttctcacaccat
caatagtcactcagagctgtggttgttatctgaagtgtgttgcagtccaa
ctttgccccatgacagcctgcttcaaactcagttgataattgtcagtgcg
gcatctttttctcagtaagcatccttgtacatttttttctgtctttatta
ggacattttacaatttcatcattaagcatattttctgcaatatttcaaaa
gcatttttaggaaaatgaaatttctttctctctgagaagtcttttaccac
aaatgggcagtatcattaatctattatagagctacattctactgactggc
acaaaagcctcattttctagtctttctcatctatcttattcacaggagac
atgtttttgtttgtatgattggttttttccagaccaggttcttctatgta
gccttggctgtcctgcactttctttgtagatgagactggctgcaactaga
gatcagatgctctttcctccaatgctgaaattaaaaaatgctgc
tttccctcttattgggttgttgtgtccaacttcgatataaaagtttttgc
tttatcttatttgtcatgtttcattgttatctcttagaatcctattcttt
tctaagagacaggaaggagtggatctggaggggattggaggtgaagagga
agtgagaggaaaactatagccgggacatattggaagagaaaaatctattt
tcaaaagataaaaaatataatgatgaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69057601_69058705
seq2: B6Ng01-126A02.b_45_1138 (reverse)

seq1  GCAGCATGTTTTTAATGTCAGCATTTGGGAGGTAGAGGCATCTGGATCTC  50
      ||||||| |||||||| ||||||||  ||||| |   |||||| ||||||
seq2  GCAGCAT-TTTTTAATTTCAGCATT--GGAGGAAAGAGCATCT-GATCTC  46

seq1  TGAGTTTGCAGCCAGTCTCATCTACAAAGAAAGTTGCAGGACAGCCAAGG  100
      | || |||||||||||||||||||||||||||| ||||||||||||||||
seq2  T-AG-TTGCAGCCAGTCTCATCTACAAAGAAAG-TGCAGGACAGCCAAGG  93

seq1  CTACATAGAAGAACCTGGTCTTGGAAAAAAAACCAATCATACAAACAAAA  150
      ||||||||||||||||||||| |   |||||||||||||||||||| |||
seq2  CTACATAGAAGAACCTGGTCTGG---AAAAAACCAATCATACAAAC-AAA  139

seq1  AACATGTCTCCTGTGAATAAGATAGATGAGAAAGACTAGAAAATGAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTCTCCTGTGAATAAGATAGATGAGAAAGACTAGAAAATGAGGCT  189

seq1  TTTGTGCCAGTCAGTAGAATGTAGCTCTATAATAGATTAATGATACTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCCAGTCAGTAGAATGTAGCTCTATAATAGATTAATGATACTGCC  239

seq1  CATTTGTGGTAAAAGACTTCTCAGAGAGAAAGAAATTTCATTTTCCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGGTAAAAGACTTCTCAGAGAGAAAGAAATTTCATTTTCCTAAA  289

seq1  AATGCTTTTGAAATATTGCAGAAAATATGCTTAATGATGAAATTGTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTTGAAATATTGCAGAAAATATGCTTAATGATGAAATTGTAAAA  339

seq1  TGTCCTAATAAAGACAGAAAAAAATGTACAAGGATGCTTACTGAGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAATAAAGACAGAAAAAAATGTACAAGGATGCTTACTGAGAAAAA  389

seq1  GATGCCGCACTGACAATTATCAACTGAGTTTGAAGCAGGCTGTCATGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCGCACTGACAATTATCAACTGAGTTTGAAGCAGGCTGTCATGGGG  439

seq1  CAAAGTTGGACTGCAACACACTTCAGATAACAACCACAGCTCTGAGTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTGGACTGCAACACACTTCAGATAACAACCACAGCTCTGAGTGAC  489

seq1  TATTGATGGTGTGAGAAAGGGCAAGACCATCGTTAGTCAGGTTTGGGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATGGTGTGAGAAAGGGCAAGACCATCGTTAGTCAGGTTTGGGCAT  539

seq1  AGAGATAAATAGAAGAGTGTTGTGCAGCCCCTAACAGAGTTGTACTGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAAATAGAAGAGTGTTGTGCAGCCCCTAACAGAGTTGTACTGCCC  589

seq1  AGCACTGCAGTCTCAGCTTTGCAGGAACAGAGAGCACCTAAGTGACTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCAGTCTCAGCTTTGCAGGAACAGAGAGCACCTAAGTGACTGCT  639

seq1  ACTCTTCTCTGCAGTTACATCTCTAGGACCACCCCTTTCCTTCTATTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTCTGCAGTTACATCTCTAGGACCACCCCTTTCCTTCTATTCCC  689

seq1  TAGGCAAATACGAAGACACAGCTACTGAATCAACCCCACTTTTTAGTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAATACGAAGACACAGCTACTGAATCAACCCCACTTTTTAGTCAA  739

seq1  ATCATGACACTCACTTTGCCTATCTTCAGAATTATCTACTAGAAAACATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGACACTCACTTTGCCTATCTTCAGAATTATCTACTAGAAAACATT  789

seq1  TAGCAATGATTGCCTCACAATTTCCTGCTAAGGAAATAGCTCATTTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATGATTGCCTCACAATTTCCTGCTAAGGAAATAGCTCATTTTTTT  839

seq1  CTCCAGTCTAATGGTGTCTCTTGTTATAAGAGAAAGAACAATTGCAACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTCTAATGGTGTCTCTTGTTATAAGAGAAAGAACAATTGCAACTC  889

seq1  AACTTCAAAGAGAATTTTTATATTAATATATCTATGTTGTATGAGTTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAAAGAGAATTTTTATATTAATATATCTATGTTGTATGAGTTGTG  939

seq1  TACATGTATATGTGGCTGCATATGTACCACAGTGTGCCTGTAGACATCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTATATGTGGCTGCATATGTACCACAGTGTGCCTGTAGACATCAG  989

seq1  AGGACAATCTATGGGTGTCACATACCTCCTGAGGTTGTGTAAGTCCTGGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAATCTATGGGTGTCACATACCTCCTGAGGTTGTGTAAGTCCTGGG  1039

seq1  GATGGAACTCTGGTCATCAGTCCCTGTGGATAACACTGCCCACTGAGGAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAACTCTGGTCATCAGTCCCTGTGGATAACACTGCCCACTGAGGAG  1089

seq1  AATTC  1105
      |||||
seq2  AATTC  1094