BAC Information

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BAC

Clone NameB6Ng01-126M05
Chromosome8 (Build37)
Map Location 33,922,339 - 34,038,691
singlet/doubletdoublet
Overlap geneLOC100042715
Upstream geneNrg1, 2010007E15Rik, EG666589, EG546052
Downstream geneLOC628408, EG628412, Wrn, Purg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr, Gtf2e2, Rbpms, LOC100042769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126M05.bB6Ng01-126M05.g
ACCDH929048DH929049
length1,007378
definitionDH929048|Mus musculus domesticus DNA, BAC clone: B6Ng01-126M05, 5' end.DH929049|Mus musculus domesticus DNA, BAC clone: B6Ng01-126M05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,038,166 - 34,038,691)(33,922,339 - 33,922,722)
sequence
gaattcattattttgctgtgaacattttatttttataacaacatttgtta
ggaagactatagttttctcagtgattttacacacatacacaagcagctgc
atgaacatttgttacatgtggatttatttctgggttctgtactcatctgg
tggcctgttttttcttatgcaagtactagttgggcccaatccaggtgaat
ttccaagatcagaagtgtttacagtggttggcccagacaagtgacctgtt
ttttatcttcatatgatcaacacccccttggattgaccctgctgtcagta
ctagccacatagtttttgaggtacagtgaaaaatgaaaatgtaagtcctt
ttgtttaagagagctcatagattttaagttacacacatcatcatatgaaa
cacaggtcccttttaagaataggatcttgggcaactactgtatcaatgtc
cttttcaattgttttaattactggggcaaaatcccttaggaaagcaactg
aggggagtctatgttagttcataagttcaggggagtttcaatctctcatg
gtaggcaaggcggggaagagggtagtgagagcatgcagacacatctcagc
tcatagctgactaggcagaagaaagcccacaccagaaccagagacagaaa
atctccaggaccagccctgagccacttacttctgccaacaagttgccaca
tcccaaagacatcatcccccaaaaatattagtaccagctggggaccaaat
gttcaaatacagtcatcagtggggaacattttgttttctagctacacagg
ttggggtgtacatgggacagagcttcaggctgtaatgttgttctatatct
ttaaatgaaaatcagggcgggtgaaatttgactctgttatttcttcccag
tgttaacttggttgtctggtctctttgcatttccatatgaactttaggaa
tatttggttcatttcttctttgttaaatttttttgaaatgagttggtttg
gtttttt
cattgttagataccccaaggccatctcctaaaacagtgaataggaaacag
atctatttatgattatttggaaaagagtggccaattttctttttttagag
agatggaaacattcactctttagaccaggctggcctcgaaaagagatcta
tatgtctctgcctcctgaatgctgggataaaaggtgtgggccaccactgt
tggactctttcagatttgacctcagagatactgtgctatatctatctatc
tatctacttatctatctatacttatctatctatctatctatctatctatc
tatctatctatctatctatctatctatcgttgtgatgttgggtttggttt
tagattggttgttttagtttggggtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_34038166_34038691
seq2: B6Ng01-126M05.b_534_1055 (reverse)

seq1  AAAAAACAAAACCAACTCATTTCAAAAAAAATTTTAACAAAAGAAGAAAT  50
      ||||||| ||||||||||||||||||||||  |||||| |||||||||||
seq2  AAAAAACCAAACCAACTCATTTCAAAAAAA--TTTAAC-AAAGAAGAAAT  47

seq1  GAACCAAATATTCCTAAAGTTCATATGGAAATGCAAAGAGACCAGAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAACCAAATATTCCTAAAGTTCATATGGAAATGCAAAGAGACCAG-ACAA  96

seq1  CCAAGTTAACACTGGGAAGAAATAACAGAGTCAAATTGTCACCCGCCCTG  150
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCAAGTTAACACTGGGAAGAAATAACAGAGTCAAATT-TCACCCGCCCTG  145

seq1  ATTTTCATTTAAAGATATAGAACAACATTACAGCCTGAAGCTCTGTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATTTAAAGATATAGAACAACATTACAGCCTGAAGCTCTGTCCCA  195

seq1  TGTACA-CCCAACCTGTGTAGCTAGAAAACAAAATGTTCCCCACTGATGA  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACCCCAACCTGTGTAGCTAGAAAACAAAATGTTCCCCACTGATGA  245

seq1  CTGTATTTGAACATTTGGTCCCCAGCTGGTACTAATATTTTTGGGGGATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTGAACATTTGGTCCCCAGCTGGTACTAATATTTTTGGGGGATG  295

seq1  ATGTCTTTGGGATGTGGCAACTTGTTGGCAGAAGTAAGTGGCTCAGGGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTGGGATGTGGCAACTTGTTGGCAGAAGTAAGTGGCTCAGGGCT  345

seq1  GGTCCTGGAGATTTTCTGTCTCTGGTTCTGGTGTGGGCTTTCTTCTGCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGGAGATTTTCTGTCTCTGGTTCTGGTGTGGGCTTTCTTCTGCCT  395

seq1  AGTCAGCTATGAGCTGAGATGTGTCTGCATGCTCTCACTACCCTCTTCCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCTATGAGCTGAGATGTGTCTGCATGCTCTCACTACCCTCTTCCC  445

seq1  CGCCTTGCCTACCATGAGAGATTGAAACTCCCCTGAACTTATGAACTAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTGCCTACCATGAGAGATTGAAACTCCCCTGAACTTATGAACTAAC  495

seq1  ATAGACTCCCCTCAGTTGCTTTCCTAA  526
      |||||||||||||||||||||||||||
seq2  ATAGACTCCCCTCAGTTGCTTTCCTAA  522

seq1: chr8_33922339_33922722
seq2: B6Ng01-126M05.g_70_453

seq1  GAATTCCATTGTTAGATACCCCAAGGCCATCTCCTAAAACAGTGAATAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGTTAGATACCCCAAGGCCATCTCCTAAAACAGTGAATAGG  50

seq1  AAACAGATCTATTTATGATTATTTGGAAAAGAGTGGCCAATTTTCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATCTATTTATGATTATTTGGAAAAGAGTGGCCAATTTTCTTTTT  100

seq1  TTAGAGAGATGGAAACATTCACTCTTTAGACCAGGCTGGCCTCGAAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAGATGGAAACATTCACTCTTTAGACCAGGCTGGCCTCGAAAAGA  150

seq1  GATCTATATGTCTCTGCCTCCTGAATGCTGGGATAAAAGGTGTGGGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATATGTCTCTGCCTCCTGAATGCTGGGATAAAAGGTGTGGGCCAC  200

seq1  CACTGTTGGACTCTTTCAGATTTGACCTCAGAGATACTGTGCTATATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTGGACTCTTTCAGATTTGACCTCAGAGATACTGTGCTATATCTA  250

seq1  TCTATCTATCTACTTATCTATCTATACTTATCTATCTATCTATCTATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCTACTTATCTATCTATACTTATCTATCTATCTATCTATCTA  300

seq1  TCTATCTATCTATCTATCTATCTATCTATCTATCGTTGTGATGTTGGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCTATCTATCTATCTATCTATCTATCGTTGTGATGTTGGGTT  350

seq1  TGGTTTTAGATTGGTTGTTTTAGTTTGGGGTTTT  384
      ||||||||||||||||||||||||||||||||||
seq2  TGGTTTTAGATTGGTTGTTTTAGTTTGGGGTTTT  384