BAC Information

Click to search

BAC

Clone NameB6Ng01-127E10
Chromosome8 (Build37)
Map Location 127,793,486 - 127,926,756
singlet/doubletdoublet
Overlap genenone
Upstream geneGalnt2, Pgbd5, Cog2, Agt, Capn9, 2310022B05Rik, Ttc13, Arv1, 2310031A18Rik, LOC668444, Trim67, 2810004N23Rik, Gnpat, Exoc8, Gm505, Egln1, Tsnax, Disc1
Downstream geneSipa1l2, 4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127E10.bB6Ng01-127E10.g
ACCDH929434DH929435
length588645
definitionDH929434|Mus musculus domesticus DNA, BAC clone: B6Ng01-127E10, 5' end.DH929435|Mus musculus domesticus DNA, BAC clone: B6Ng01-127E10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,926,213 - 127,926,756)(127,793,486 - 127,794,129)
sequence
aggacctctggaagagcagccagtgctctttaccaaggagccatctctac
agccctcacattatttttgagacagggtctcccactgaacctggagcttg
ctgatttagctaggctggctggccagggagccccagagatctgcctgtct
ctgcctcccctgatgatgtcacagatgcacctacactcaggttgctattg
ttcaggtccctcagtttttcacagctgagccacccacctctccacctccc
cacctccccacctccccacttccccacctcaccacctccccacctcccca
ttcccaccccaccttatcccctgcccctcctcccctctcttttctctaac
aatgctgtttggagctgtctgagaacctctactgagctgttaattcacca
atagggggactatttgtgtgagggggtactgtgaagagaggaagagctga
tatggggttgtaaagtgaataaagaaagaaatttaatttttaaaaatgca
ctataaaaaaagaaaaaaagaaatatctgtgccctaggcaaggagctgag
ttctgaggctatccagtgtgttgtgtgtgtgtgtgtct
gaattcctccccacaggtgagcagagcccaagcaaagttagattcgggaa
gatcttagcatctcagtgaatcacacagcacccacagcaaagcctgagta
tagagaggggctgccttcagacctaaggcgaaggcttttcagtttgatag
gcatcccttgggctcctatgaagtgttgagtgctggagttacaggaatac
aaatgccgacagagccacggcaattacagctgtgtgcatggtctctgtgc
tctccactctggactttcaactgcttcagataaagagacatggctctgtg
ctacaagaccctgtcctgtactttattgattatccttcatctgaactgga
tttaggtgtgctcaggagaaacacctgtgttgtgtgtcggagagtgtttc
cagagaggtttaactggaatagggagacgagtctggggggcctggcctga
atgaaaagggagaaaagaagaaagtgagctgatcatctctctctctctct
ctctctctctctctctctctctctctgcttcctgactatataaatacaac
aggacagccaccaggcacccctttgcactactaacgagggctgtggatct
aaatttcaagaatagtttcctatggcaggggttgggggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_127926213_127926756
seq2: B6Ng01-127E10.b_97_640 (reverse)

seq1  AGACACACACACACACAACACACTGGATAGCCTCAGAACTCAGCTCCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACACACACACAACACACTGGATAGCCTCAGAACTCAGCTCCTTG  50

seq1  CCTAGGGCACAGATATTTCTTTTTTTCTTTTTTTATAGTGCATTTTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGCACAGATATTTCTTTTTTTCTTTTTTTATAGTGCATTTTTAAA  100

seq1  AATTAAATTTCTTTCTTTATTCACTTTACAACCCCATATCAGCTCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATTTCTTTCTTTATTCACTTTACAACCCCATATCAGCTCTTCCT  150

seq1  CTCTTCACAGTACCCCCTCACACAAATAGTCCCCCTATTGGTGAATTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCACAGTACCCCCTCACACAAATAGTCCCCCTATTGGTGAATTAAC  200

seq1  AGCTCAGTAGAGGTTCTCAGACAGCTCCAAACAGCATTGTTAGAGAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGTAGAGGTTCTCAGACAGCTCCAAACAGCATTGTTAGAGAAAAG  250

seq1  AGAGGGGAGGAGGGGCAGGGGATAAGGTGGGGTGGGAATGGGGAGGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGAGGAGGGGCAGGGGATAAGGTGGGGTGGGAATGGGGAGGTGGG  300

seq1  GAGGTGGTGAGGTGGGGAAGTGGGGAGGTGGGGAGGTGGGGAGGTGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGTGAGGTGGGGAAGTGGGGAGGTGGGGAGGTGGGGAGGTGGAGA  350

seq1  GGTGGGTGGCTCAGCTGTGAAAAACTGAGGGACCTGAACAATAGCAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTGGCTCAGCTGTGAAAAACTGAGGGACCTGAACAATAGCAACCT  400

seq1  GAGTGTAGGTGCATCTGTGACATCATCAGGGGAGGCAGAGACAGGCAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTAGGTGCATCTGTGACATCATCAGGGGAGGCAGAGACAGGCAGAT  450

seq1  CTCTGGGGCTCCCTGGCCAGCCAGCCTAGCTAAATCAGCAAGCTCCAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGGCTCCCTGGCCAGCCAGCCTAGCTAAATCAGCAAGCTCCAGGT  500

seq1  TCAGTGGGAGACCCTGTCTCAAAAATAATGTGAGGGCTGTAGAG  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGGAGACCCTGTCTCAAAAATAATGTGAGGGCTGTAGAG  544

seq1: chr8_127793486_127794129
seq2: B6Ng01-127E10.g_69_713

seq1  GAATTCCTCCCCACAGGTGAGCAGAGCCCAAGCAAAGTTAGATTCGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCCACAGGTGAGCAGAGCCCAAGCAAAGTTAGATTCGGGAA  50

seq1  GATCTTAGCATCTCAGTGAATCACACAGCACCCACAGCAAAGCCTGAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTAGCATCTCAGTGAATCACACAGCACCCACAGCAAAGCCTGAGTA  100

seq1  TAGAGAGGGGCTGCCTTCAGACCTAAGGCGAAGGCTTTTCAGTTTGATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGGGGCTGCCTTCAGACCTAAGGCGAAGGCTTTTCAGTTTGATAG  150

seq1  GCATCCCTTGGGCTCCTATGAAGTGTTGAGTGCTGGAGTTACAGGAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCTTGGGCTCCTATGAAGTGTTGAGTGCTGGAGTTACAGGAATAC  200

seq1  AAATGCCGACAGAGCCACGGCAATTACAGCTGTGTGCATGGTCTCTGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCGACAGAGCCACGGCAATTACAGCTGTGTGCATGGTCTCTGTGC  250

seq1  TCTCCACTCTGGACTTTCAACTGCTTCAGATAAAGAGACATGGCTCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACTCTGGACTTTCAACTGCTTCAGATAAAGAGACATGGCTCTGTG  300

seq1  CTACAAGACCCTGTCCTGTACTTTATTGATTATCCTTCATCTGAACTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGACCCTGTCCTGTACTTTATTGATTATCCTTCATCTGAACTGGA  350

seq1  TTTAGGTGTGCTCAGGAGAAACACCTGTGTTGTGTGTCGGAGAGTGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTGTGCTCAGGAGAAACACCTGTGTTGTGTGTCGGAGAGTGTTTC  400

seq1  CAGAGAGGTTTAACTGGAATAGGGAGACGAGTCTGGGGGGCCTGGCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGGTTTAACTGGAATAGGGAGACGAGTCTGGGGGGCCTGGCCTGA  450

seq1  ATGAAAAGGGAGAAAAGAAGAAAGTGAGCTGATCATCTCTCTCTCTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGGGAGAAAAGAAGAAAGTGAGCTGATCATCTCTCTCTCTCTCT  500

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTGCTTCCTGACTATATAAATACAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTGCTTCCTGACTATATAAATACAAC  550

seq1  AGGACAGCCACCAGGCACCCCTTTGCACTACTAACGAGGGCTGTGGATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCCACCAGGCACCCCTTTGCACTACTAACGAGGGCTGTGGATCT  600

seq1  AAATTTCAAGAATAG-TTCCTATGGCAGGGGTTGGGGGGGTGGGG  644
      ||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAATTTCAAGAATAGTTTCCTATGGCAGGGGTTGGGGGGGTGGGG  645