BAC Information

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BAC

Clone NameB6Ng01-128P13
Chromosome8 (Build37)
Map Location 114,622,922 - 114,624,082
singlet/doubletsinglet
Overlap genenone
Upstream gene4930402E16Rik, 9430091E24Rik, Glg1, Rfwd3, LOC547023, Mlkl, Fa2h, Wdr59, Znrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498
Downstream geneLOC100042040, Cntnap4, LOC100042061
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128P13.bB6Ng01-128P13.g
ACCDH930680DH930681
length1,149812
definitionDH930680|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P13, 5' end.DH930681|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaagggaggatagattcacacttttctggctggtatgaaagt
gaaagtgtgtgtgtgtgtatgtgtgtagaataaatgtatagatatattaa
tattcaatataattacagttattagtcattcatgcagattatgagctgcc
tgccttaaagaactatagactaataatgaccatactttcaagcgttcggc
ttatatctaattatacccattgtgtggcagactctgttaaccaaaggtca
gtaaataagataaagagcctggtattcacatgatccaagcagaataagtc
agagatggaaaggagacattgggagagctactgaaatcaagtatcaagat
agtcaaggatttaactgttcatagaacacgagtctcttggccgattgtcc
aacgttaaataattacgggctgttttatagattctgtgctgtcacatctt
taggaaaaggaatgtcaccattgccagccccactcggctctcattaattc
actctgccatcgctactaattatttgtaaatactcaggactcaaaacact
taattatcacagccttttattagtgtctgaatattcccattctaagctat
attgtgtagtatggcagttatttgcagacactttaagtttaaatagctat
taattaaaagtaaaattcatgggctggctttttaaatggctcagcaggta
aagacacttgtagtcaagactgatgagctcggtttgattcccaagaccca
caaggaggcaggagagagtggacttctggaagctgtcttctgaactccac
acagcacccccccatgaatgtaatcaaagttcttaaataaataacagtca
cgcccatagtttttcattctcgcttcaagggccaactgggcctctgaggt
aaagacttcttaccaagtctactggacagaattaatttattgatttctat
ataaataccttccacctcaaacaaaatcacactgccaagaactttttttt
attataagttatcttttcatttcctaagatttatttctttgttattttgt
ctggggaaggctatgccagttgcctggcaaaccaggagtggattcctcac
agttcggctattgatggaacccaggcccaatggagggacctaaagaaag
gaattcacatgagcacacatgtgtatgtggactatggattatggggtgct
cctgtgtgttgggtgtggattcacataaacacccctgtgtatgtggacaa
ccttgaatgtctttcatcaggagtcacccacctttccaccctcgctggcc
tagaattcaccaattagtctatcctggctagccagcagttccagatgtct
ctgtctccaccaccccagtgctgggattgcaagcttgtgtcactctgcct
gactacttttttttctccataatattttattgattatttgggaatttcat
atcatgaagcctgagcacacttcctcccagtcctcccaggttcatacccc
gaatcttgtgacctctccccacacaaaagaaggaggaggaagaagagggg
gaagaagagaaggaagaagaggaggaagaggaaaaagaggaggaagaaaa
gaaaaactacttcaatttgtttttctctggaccatggtcaaactccaggt
gaccagctccttaaagataactgagtcttttcccacctgaaccgccccac
ctcagaagccatcagttgtggagagctacacttcagtatccttatcacaa
tttttaagagttctctttgatgactttctgtctcagctcttgctttttgg
ggcaacagatacgagggggagataagtttttgtaacagaagccttctatg
tccctctttcccatttgagatgtcaaaagtggattccttgccctttaagt
caactgggcaaaagatcttgggcatgggttctggaagagcaccatctatg
ggacatccacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_114622922_114624082
seq2: B6Ng01-128P13.b_50_1198

seq1  GAATTCAACAAGGGAGGATAGATTCACACTTTTCTGGCTGGTATGAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAAGGGAGGATAGATTCACACTTTTCTGGCTGGTATGAAAGT  50

seq1  GAAAGTGTGTGTGTGTGTATGTGTGTAGAATAAATGTATAGATATATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTGTGTGTGTGTATGTGTGTAGAATAAATGTATAGATATATTAA  100

seq1  TATTCAATATAATTACAGTTATTAGTCATTCATGCAGATTATGAGCTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAATATAATTACAGTTATTAGTCATTCATGCAGATTATGAGCTGCC  150

seq1  TGCCTTAAAGAACTATAGACTAATAATGACCATACTTTCAAGCGTTCGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTAAAGAACTATAGACTAATAATGACCATACTTTCAAGCGTTCGGC  200

seq1  TTATATCTAATTATACCCATTGTGTGGCAGACTCTGTTAACCAAAGGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCTAATTATACCCATTGTGTGGCAGACTCTGTTAACCAAAGGTCA  250

seq1  GTAAATAAGATAAAGAGCCTGGTATTCACATGATCCAAGCAGAATAAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAAGATAAAGAGCCTGGTATTCACATGATCCAAGCAGAATAAGTC  300

seq1  AGAGATGGAAAGGAGACATTGGGAGAGCTACTGAAATCAAGTATCAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGAAAGGAGACATTGGGAGAGCTACTGAAATCAAGTATCAAGAT  350

seq1  AGTCAAGGATTTAACTGTTCATAGAACACGAGTCTCTTGGCCGATTGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGGATTTAACTGTTCATAGAACACGAGTCTCTTGGCCGATTGTCC  400

seq1  AACGTTAAATAATTACGGGCTGTTTTATAGATTCTGTGCTGTCACATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTAAATAATTACGGGCTGTTTTATAGATTCTGTGCTGTCACATCTT  450

seq1  TAGGAAAAGGAATGTCACCATTGCCAGCCCCACTCGGCTCTCATTAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAAGGAATGTCACCATTGCCAGCCCCACTCGGCTCTCATTAATTC  500

seq1  ACTCTGCCATCGCTACTAATTATTTGTAAATACTCAGGACTCAAAACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCCATCGCTACTAATTATTTGTAAATACTCAGGACTCAAAACACT  550

seq1  TAATTATCACAGCCTTTTATTAGTGTCTGAATATTCCCATTCTAAGCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATCACAGCCTTTTATTAGTGTCTGAATATTCCCATTCTAAGCTAT  600

seq1  ATTGTGTAGTATGGCAGTTATTTGCAGACACTTTAAGTTTAAATAGCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTAGTATGGCAGTTATTTGCAGACACTTTAAGTTTAAATAGCTAT  650

seq1  TAATTAAAAGTAAAATTCATGGGCTGGCCTTTTAAATGGCTCAGCAGGTA  700
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAATTAAAAGTAAAATTCATGGGCTGGCTTTTTAAATGGCTCAGCAGGTA  700

seq1  AAGACACTTGTAGTCAAGACTGATGAGCTCGGTTTGATTCCCAAGACCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACTTGTAGTCAAGACTGATGAGCTCGGTTTGATTCCCAAGACCCA  750

seq1  CAAGGAGGCAGGAGAGAGTGGACTTCTGGAAGCTGTCTTCTGAACTCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGGCAGGAGAGAGTGGACTTCTGGAAGCTGTCTTCTGAACTCCAC  800

seq1  ACAGCACCCCCCCATGAATGTAATCAAAGTTCTTAAATAAAATAACAGTC  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACAGCACCCCCCCATGAATGTAATCAAAGTTCTTAAAT-AAATAACAGTC  849

seq1  ACGCCCATAGTTTTTCATTCTCGCTTCAAGGGCCAACT-GGCCTCTGAGG  899
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACGCCCATAGTTTTTCATTCTCGCTTCAAGGGCCAACTGGGCCTCTGAGG  899

seq1  TAAAAGACTTCTTACCAAGTTCTACTGGACAGAATTAATTTATTGATTTC  949
      | ||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  T-AAAGACTTCTTACCAAG-TCTACTGGACAGAATTAATTTATTGATTTC  947

seq1  TAATATAAAATAACCTTCCACCTCAAACAAAATCACACTGCCAAGAACTT  999
      | |||||||   |||||||||||||||||||||||||||||||||||| |
seq2  T-ATATAAA--TACCTTCCACCTCAAACAAAATCACACTGCCAAGAAC-T  993

seq1  TTTTTTTATTAATAAGTTAATCTTTTTCATTTCTTAAGATTTATTTCTTT  1049
      |||||||||| ||||||| ||| |||||||||| ||||||||||||||||
seq2  TTTTTTTATT-ATAAGTT-ATC-TTTTCATTTCCTAAGATTTATTTCTTT  1040

seq1  GTTTATTTTGTCTTGTGTGAGGCTATGCCAG-TGCCTGGCAAACACAGAA  1098
      | |||||||||| || |  |||||||||||| |||||||||||| ||| |
seq2  G-TTATTTTGTC-TGGGGAAGGCTATGCCAGTTGCCTGGCAAAC-CAGGA  1087

seq1  GTGGA-TGCTCACAG-TCAGCTATTGGATGGAACACAGGGCCCCCAATGG  1146
      ||||| | ||||||| || |||||| |||||||| ||||   ||||||||
seq2  GTGGATTCCTCACAGTTCGGCTATT-GATGGAACCCAGG---CCCAATGG  1133

seq1  A-GGAGCTAAAGAAAG  1161
      | ||| ||||||||||
seq2  AGGGACCTAAAGAAAG  1149