BAC Information

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BAC

Clone NameB6Ng01-129K03
ChromosomeX (Build37)8 (Build37)
Map Location 64,051,647 - 64,052,14162,668,320 - 62,668,450
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC671840, Slitrk2, LOC666824
Downstream geneLOC627734, EG666828, Gm1140, LOC666842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129K03.bB6Ng01-129K03.g
ACCDH931166DH931167
length990131
definitionDH931166|Mus musculus domesticus DNA, BAC clone: B6Ng01-129K03, 5' end.DH931167|Mus musculus domesticus DNA, BAC clone: B6Ng01-129K03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(64,051,647 - 64,052,141)(62,668,320 - 62,668,450)
sequence
gaattccatccatttctaaactcataggttgttgttctagactaaaatat
cttaaaacattactagatttggagataagtgtcttcaaaataaaattaag
ataaaatgagttgattcaggtaaaaccaaattcaacatgacatataagaa
gagaaaactaaaacacagaccattatgtcaggaagactacatatagccaa
gaaaaaggaagcatcctgcaatccaggacgtttgtgtcttctgaggtctt
ccttactcttttatttatttatttatttatttatttatttatttatttat
tttttccattttttattaggtatttaactcatttacatttccaatgctat
accaaaagtcccccatatccacccacccccactcccctgcccacccactc
cccctttttggccctggtattcccctgtactggggcatataaagtttgca
agtccaatgggcctctctttccagtgatggccgactaggccatcttttga
tatatatgcagctagagtcaagagctccggggtactggttagctcataat
gttgttccacctatagggttgcagatccctttagctccttggctactttc
tctagctcctccattgggagccctatgatccatccattagctgactgtga
gcatccacttctgtgtttgctgggccccggcatagtctcacaagagacag
ctacatctgcgtccttttcaataaaatcttgctagtatatgcaatggtgt
cagcgtttggatgctgattatggggtggatccctggctatggcagtctct
acatggtccatcctttcatctcagctccaaacttcgtctctgtaactcct
ttccatgggtgttttgttcccaaatctaagaggggcatagtgtccacact
tcagtcttcatttttcttgagtttcatgtgtttagcaaattatatcttat
atcttgggtatcttaggttttggggctaatatccacttat
atcagaataactgcaatgtgttttcatttttgaactgatagaaaattcag
atatatgagaaaaattgaaaaaaactaagcttcatatatatttgtacttg
tgtgtgtgtgtgtggtgtggtgggtgtggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_64051647_64052141
seq2: B6Ng01-129K03.b_481_976 (reverse)

seq1  ACACATGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTATGCCCC  50
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCC  50

seq1  TCCTTAGAATTGGGAACAAAACACCCATGG-AAGGAGTTACAGAGACAAA  99
      | |||||| ||||||||||||||||||||| |||||||||||||||| ||
seq2  T-CTTAGATTTGGGAACAAAACACCCATGGAAAGGAGTTACAGAGACGAA  99

seq1  GTTTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCATATCCAG  149
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTTTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCATAGCCAG  149

seq1  GGATCCACCCCATAATCAGCATCCAAACGCTGACACCATTGCATACACTA  199
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGATCCACCCCATAATCAGCATCCAAACGCTGACACCATTGCATATACTA  199

seq1  GCAAGATTTTATTG-AAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTA  248
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  GCAAGATTTTATTGAAAAGGACGCAGATGTAGCTGTCTCTTGTGAGACTA  249

seq1  TGCCAGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTAATGGA  298
      |||| ||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGCCGGGGCCCAGCAAACACAGAAGTGGATGCTCACAGTCAGCTAATGGA  299

seq1  TGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCT  348
      ||||||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  TGGATCATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCT  349

seq1  AAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA  398
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAGCTAACCAGTA  399

seq1  CCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTC  448
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCCCGGAGCTCTTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTC  449

seq1  AGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATG  495
       ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATG  496

seq1: chr8_62668320_62668450
seq2: B6Ng01-129K03.g_73_203

seq1  ATCAGAATAACTGCAATGTGTTTTCATTTTTGAACTGATAGAAAATTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAATAACTGCAATGTGTTTTCATTTTTGAACTGATAGAAAATTCAG  50

seq1  ATATATGAGAAAAATTGAAAAAAACTAAGCTTCATATATATTTGTACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGAGAAAAATTGAAAAAAACTAAGCTTCATATATATTTGTACTTG  100

seq1  TGTGTGTGTGTGTGGTGTGGTGGGTGTGGTA  131
      |||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGGTGTGGTGGGTGTGGTA  131