BAC Information

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BAC

Clone NameB6Ng01-132D17
Chromosome8 (Build37)
Map Location 58,157,387 - 58,239,616
singlet/doubletdoublet
Overlap genenone
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356
Downstream geneLOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132D17.bB6Ng01-132D17.g
ACCDH933087DH933088
length1,1721,088
definitionDH933087|Mus musculus domesticus DNA, BAC clone: B6Ng01-132D17, 5' end.DH933088|Mus musculus domesticus DNA, BAC clone: B6Ng01-132D17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,157,387 - 58,158,582)(58,238,529 - 58,239,616)
sequence
gaattcctccataattctcacatctttgtacttctctagctaacctttct
tttgattaatgcttttgatctttagaaatgataatatattgagcaattaa
atcatgttggcctaggaaccattaaataactttaaatttaatagtgctta
tatcccctttaaatgttagggccacattatattattttttgattcaccag
acactccaatcatttaccatgctttcagactctaatttatgaccaagtaa
taagaacagatatatatttactctaggtccatctctctgtcgaaaattca
ttgacagtcactgtgttctacagcagtatcttaactgtaccattgacctc
aattcctctaaagccatctattcaaatatatttattcatagacttataaa
acacttgcagacagccaagtatgaatcaaaattggtttatttattctgaa
aactgagaaagtatgacctacctgttaatattgcattaaaaataagtatg
tagttatttagtattctagatggtactgtgcctttcaaacaaaaatagaa
gaggattaggagaatatgaagaaacattggagggatggtattattttgca
cgaatgaaaaataaatgccttcattgataaaatcatatctgagaagagac
cagaaagaaatgaaagtgacacatattcatgtagtttatatggccacagt
tctctgctcggtgaacctatgaaggttgccttgcatagccacattatttt
aaacgaaagtgatatggttctggtctttgttgaagcaaaacattgaaatc
cattattatatggtcaaacctgagacctgagacatagtaactgcatgtag
cactgaaggaaatgaagagggcattattattttggtccaagcaaccatgt
ggcaatttacaatcatcctaacctccagttgccgagaatctggaaccctt
ttctgaccttggtgggtaccagggatgcacactgtgaaaaacatacacat
atgcaaacgtaatacatacaaataaaatataaatcttaaagaactaataa
actattcagagtattgaggttgaggagtctacagtgtcaggcacctgtca
gcactcagtaaattgcatctctagaatagtatgattgtttaaaggaactg
ggtgaatatgaagccagcattt
gaattcctaccacaaatttctgtaaataattttctagttaacattattgc
aaacagactcaatttagctaaccttcatatatacttaaatacaaatacct
caaaatcaataaaaggtgacatttatagaacatgataaaatataactcat
tggtgataaaacactacacataaaatttaacagccaataacgagttattt
gtaaattttttgaagatttttaatcttcttatccatagtatctattgatg
actgtgaccaatgacaagaaataaaaatagcaacacatacattttaatta
tagtttcaatctaatattcacaaaaaggagtataatatcaagtatatgca
catctacttgatatttaaactcataaaagttaattaagaagttctatttt
gccttgaaggatttggagatgttattctatctcctggagaacagtcggtt
caagttgttccttctatagtggaaatttaccagagtcttgccatggatgg
tctatttagacaacttttcagcctgaaaatctgaattacaactatactct
gagcaaattaatatgtgaagacacttagttgttcatatatatatatatat
ataagtaatttgttgacaaaaataccagtaatagatttgttaaaaataat
ttttaaaaatgcaaattattttggtgttcaaaagaagaaattgtcatgta
gatatgtagactctctaccacgcatattatatatatatatatatttttat
atatatatatatatatatatatatatatataccacacatattatatatca
ctatataaatagctggagattttaaaaaaattatttgtcaacgataatat
aaattctctaactactgtggtttcattgaaaacctttctaaacataaatg
attgactactgtttgtttctatgcattatatttatctggtctttttcaca
tatttcaatgactaaatgctagttaaagaaaagggttagtgatgcctaac
tttgcatgtctagaagttgccccttcagcagctgggaagaccttattttt
gttgcctagaactgaagcaagttatagggtggtgtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58157387_58158582
seq2: B6Ng01-132D17.b_46_1217

seq1  GAATTCCTCCATAATTCTCACATCTTTGTACTTCTCTAGCTAACCTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCATAATTCTCACATCTTTGTACTTCTCTAGCTAACCTTTCT  50

seq1  TTTGATTAATGCTTTTGATCTTTAGAAATGATAATATATTGAGCAATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTAATGCTTTTGATCTTTAGAAATGATAATATATTGAGCAATTAA  100

seq1  ATCATGTTGGCCTAGGAACCATTAAATAACTTTAAATTTAATAGTGCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTTGGCCTAGGAACCATTAAATAACTTTAAATTTAATAGTGCTTA  150

seq1  TATCCCCTTTAAATGTTAGGGCCACATTATATTATTTTTTGATTCACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCTTTAAATGTTAGGGCCACATTATATTATTTTTTGATTCACCAG  200

seq1  ACACTCCAATCATTTACCATGCTTTCAGACTCTAATTTATGACCAAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCAATCATTTACCATGCTTTCAGACTCTAATTTATGACCAAGTAA  250

seq1  TAAGAACAGATATATATTTACTCTAGGTCCATCTCTCTGTCGAAAATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACAGATATATATTTACTCTAGGTCCATCTCTCTGTCGAAAATTCA  300

seq1  TTGACAGTCACTGTGTTCTACAGCAGTATCTTAACTGTACCATTGACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGTCACTGTGTTCTACAGCAGTATCTTAACTGTACCATTGACCTC  350

seq1  AATTCCTCTAAAGCCATCTATTCAAATATATTTATTCATAGACTTATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTCTAAAGCCATCTATTCAAATATATTTATTCATAGACTTATAAA  400

seq1  ACACTTGCAGACAGCCAAGTATGAATCAAAATTGGTTTATTTATTCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGCAGACAGCCAAGTATGAATCAAAATTGGTTTATTTATTCTGAA  450

seq1  AACTGAGAAAGTATGACCTACCTGTTAATATTGCATTAAAAATAAGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGAAAGTATGACCTACCTGTTAATATTGCATTAAAAATAAGTATG  500

seq1  TAGTTATTTAGTATTCTAGATGGTACTGTGCCTTTCAAACAAAAATAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATTTAGTATTCTAGATGGTACTGTGCCTTTCAAACAAAAATAGAA  550

seq1  GAGGATTAGGAGAATATGAAGAAACATTGGAGGGATGGTATTATTTTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTAGGAGAATATGAAGAAACATTGGAGGGATGGTATTATTTTGCA  600

seq1  CGAATGAAAAATAAATGCCTTCATTGATAAAATCATATCTGAGAAGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGAAAAATAAATGCCTTCATTGATAAAATCATATCTGAGAAGAGAC  650

seq1  CAGAAAGAAATGAAAGTGACACATATTCATGTAGTTTATATGGCCACAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAAATGAAAGTGACACATATTCATGTAGTTTATATGGCCACAGT  700

seq1  TCTCTGCTCGGTGAACCTATGAAGGTTGCCTTGCATAGCCACATTATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTCGGTGAACCTATGAAGGTTGCCTTGCATAGCCACATTATTTT  750

seq1  AAACGAAAGTGATATGGTTCTGGTCTTTGTTGAAGCAAAACATTGAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGAAAGTGATATGGTTCTGGTCTTTGTTGAAGCAAAACATTGAAATC  800

seq1  CATTATTATATGGTCAAACCTGAGACCTGAGACATAGTAACTGCATGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTATATGGTCAAACCTGAGACCTGAGACATAGTAACTGCATGTAG  850

seq1  CACTGAAGGAAATGAAGAGGGCATTATTATTTTGGTCCAAGCAACCATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGGAAATGAAGAGGGCATTATTATTTTGGTCCAAGCAACCATGT  900

seq1  GGCAATTTACAATCATCCTAACCTCCAGTTGCCGAGAATCTGGAACCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATTTACAATCATCCTAACCTCCAGTTGCCGAGAATCTGGAACCCTT  950

seq1  TTCTGACCTTGGTGGGTACCAGGGATGCACACTGTGAAAAAACATACACA  1000
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTCTGACCTTGGTGGGTACCAGGGATGCACACTGTG-AAAAACATACACA  999

seq1  TATGCAAAACGTAATACATACAAAAATAAAAATAATAAATCTTAAAAGAA  1050
      ||||| |||||||||||||||  ||||||||   ||||||||| ||||||
seq2  TATGC-AAACGTAATACATAC--AAATAAAA--TATAAATCTT-AAAGAA  1043

seq1  CTATAAAACTATTCCAGAGTATTGGAGGTAGAGGAGTCTACAAGTGTTCA  1100
      |||  |||||||| ||||||||| ||||| ||||||||||| |||||   
seq2  CTAATAAACTATT-CAGAGTATT-GAGGTTGAGGAGTCTAC-AGTGT--C  1088

seq1  AGGCAACTGTCAGCAACTCAGTAAA-TGCACCTCTAGGAATTAGTATGAT  1149
      ||||| |||||||| |||||||||| |||| ||||||  | |||||||||
seq2  AGGCACCTGTCAGC-ACTCAGTAAATTGCATCTCTAG--AATAGTATGAT  1135

seq1  TGTTTTAAAAAGGAGACTGGGTTGAAATAAATGAAGCCCAAGCATTT  1196
      |||||   |||||| |||||| |||   | ||||||||  |||||||
seq2  TGTTT---AAAGGA-ACTGGG-TGA---ATATGAAGCC--AGCATTT  1172

seq1: chr8_58238529_58239616
seq2: B6Ng01-132D17.g_68_1155 (reverse)

seq1  CTGACAACA-CCTAT-ACATGCTTCAGGTCTAGGCTACAGAAATAAGGT-  47
      |||||| || ||||| || |||||||| ||||||| ||| ||||||||| 
seq2  CTGACACCACCCTATAACTTGCTTCAGTTCTAGGCAACAAAAATAAGGTC  50

seq1  TCTCCAGCTGCTGAAGGGGCAACTTCTAGACATGC-AAGTTAGGCATCAC  96
      |  |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCCCAGCTGCTGAAGGGGCAACTTCTAGACATGCAAAGTTAGGCATCAC  100

seq1  TAAACCTTTTCTTTTAACTAGCATTTAAGTTCATTGGAAATATGTGAAAA  146
      ||| ||||||| |||||||||||||||   ||||| ||||||||||||||
seq2  TAACCCTTTTC-TTTAACTAGCATTTA--GTCATT-GAAATATGTGAAAA  146

seq1  AGACCAGATAAATATAATGCATAGAAACAAACAGTAGTCAATCATTTATG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGATAAATATAATGCATAGAAACAAACAGTAGTCAATCATTTATG  196

seq1  TTTAGAAAGGTTTTCAATGAAACCACAGTAGTTAGAGAATTTATATTATC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAGGTTTTCAATGAAACCACAGTAGTTAGAGAATTTATATTATC  246

seq1  GTTGACAAATAATTTTTTTAAAATCTTCAGCTATTTATATAGTGATATAT  296
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTTGACAAATAATTTTTTTAAAATCTCCAGCTATTTATATAGTGATATAT  296

seq1  AATATGTGTGGTATATATATATATATATATATATATATATATATAAAAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGTGGTATATATATATATATATATATATATATATATATAAAAAT  346

seq1  ATATATATATATATAATATGCGTGGTAGAGAGTCTACATATCTACATGAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATAATATGCGTGGTAGAGAGTCTACATATCTACATGAC  396

seq1  AATTTCTTCTTTTGAACACCAAAATAATTTGCATTTTTAAAAATTATTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTCTTTTGAACACCAAAATAATTTGCATTTTTAAAAATTATTTT  446

seq1  TAACAAATCTATTACTGGTATTTTTGTCAACAAATTACTTATATATATAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATCTATTACTGGTATTTTTGTCAACAAATTACTTATATATATAT  496

seq1  ATATATATGAACAACTAAGTGTCTTCACATATTAATTTGCTCAGAGTATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGAACAACTAAGTGTCTTCACATATTAATTTGCTCAGAGTATA  546

seq1  GTTGTAATTCAGATTTTCAGGCTGAAAAGTTGTCTAAATAGACCATCCAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAATTCAGATTTTCAGGCTGAAAAGTTGTCTAAATAGACCATCCAT  596

seq1  GGCAAGACTCTGGTAAATTTCCACTATAGAAGGAACAACTTGAACCGACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGACTCTGGTAAATTTCCACTATAGAAGGAACAACTTGAACCGACT  646

seq1  GTTCTCCAGGAGATAGAATAACATCTCCAAATCCTTCAAGGCAAAATAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCAGGAGATAGAATAACATCTCCAAATCCTTCAAGGCAAAATAGA  696

seq1  ACTTCTTAATTAACTTTTATGAGTTTAAATATCAAGTAGATGTGCATATA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTAATTAACTTTTATGAGTTTAAATATCAAGTAGATGTGCATATA  746

seq1  CTTGATATTATACTCCTTTTTGTGAATATTAGATTGAAACTATAATTAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATATTATACTCCTTTTTGTGAATATTAGATTGAAACTATAATTAAA  796

seq1  ATGTATGTGTTGCTATTTTTATTTCTTGTCATTGGTCACAGTCATCAATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTGTTGCTATTTTTATTTCTTGTCATTGGTCACAGTCATCAATA  846

seq1  GATACTATGGATAAGAAGATTAAAAATCTTCAAAAAATTTACAAATAACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTATGGATAAGAAGATTAAAAATCTTCAAAAAATTTACAAATAACT  896

seq1  CGTTATTGGCTGTTAAATTTTATGTGTAGTGTTTTATCACCAATGAGTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTATTGGCTGTTAAATTTTATGTGTAGTGTTTTATCACCAATGAGTTA  946

seq1  TATTTTATCATGTTCTATAAATGTCACCTTTTATTGATTTTGAGGTATTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATCATGTTCTATAAATGTCACCTTTTATTGATTTTGAGGTATTT  996

seq1  GTATTTAAGTATATATGAAGGTTAGCTAAATTGAGTCTGTTTGCAATAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAAGTATATATGAAGGTTAGCTAAATTGAGTCTGTTTGCAATAAT  1046

seq1  GTTAACTAGAAAATTATTTACAGAAATTTGTGGTAGGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTAGAAAATTATTTACAGAAATTTGTGGTAGGAATTC  1088