BAC Information

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BAC

Clone NameB6Ng01-134C10
Chromosome8 (Build37)
Map Location 10,973,319 - 11,100,598
singlet/doubletdoublet
Overlap geneIrs2
Upstream geneLig4, Abhd13, Tnfsf13b, Myo16, LOC100040008, LOC384782, LOC100040507, LOC665306
Downstream geneCol4a1, Col4a2, Rab20, 0710008K08Rik, Cars2, Ing1, Ankrd10, 1700016D06Rik, EG665271, LOC665363, LOC624710, LOC665373, Arhgef7, 1700018L24Rik, LOC100040155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134C10.bB6Ng01-134C10.g
ACCDH934520DH934521
length1921,157
definitionDH934520|Mus musculus domesticus DNA, BAC clone: B6Ng01-134C10, 5' end.DH934521|Mus musculus domesticus DNA, BAC clone: B6Ng01-134C10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,100,407 - 11,100,598)(10,973,319 - 10,974,496)
sequence
acttcttagagggcttcggaatttctgtattagaggaagtgcttgctgaa
atcctttccacttactaagtgctactttggaattgcacaatgtattgaag
aaatgagttagccctggctgtgtttgggcacacaggaggaggaggaggga
cacaagtgggaggtggaggtggtcatggtggtggtggtggtg
gaattcctcattagtgcagacacctcacccctatgaactgtctcaggctc
gactgtggcctcccctctaggggatgcatgatacagatagctgagcaggg
aacatgccccctaccccccaaggaactgctccagcccacttccctcattc
ctaagtctagctcttcctcggtttttctttttctcttcttcagcagcgct
tgggagagggtgcacaggactcacaatgtgggaagacatggcttgcttta
tttcctgatttttgagggagtcacggtagctccatatttgaagagcatga
aagacctggccaagggatatgtgcagtcacacagctgcctgagcaaccat
caaactctgtcctggttggaaactcagcttttggtaagggaaggttcact
gtggtgataaggatgtaacccatctcccaccattactcttcctttgaggt
ccacacaataaatgcatctgccacctaaggaatagcagaagctcatagag
gagtcttcgggtgttgggatcatgatccgtacaatgtcatgagccccttg
ggttatcttaaacaaacatttatttagtattacagggaatccattcgata
taaaccgaagaacaggccaagagtaacggtttctacgtgaaatcccagca
cttgggaggctaatgcaattgaagctagccagggctatgtaataaattcc
agactagcctgagctataaaacaatagcttagctagtcaacaaaaaaaga
aaagaaaaaagaaaaggcaactctagaaatgactggtaatctgctacagg
gcaaggtgacttcatatgccgaagagtagattagtctaaaatgtgtgtaa
tggagttccaacttgtagaaagagacatctgtcctgcaaagggcatgagc
cttgcatcacattgaggccttgcacctgctggaaagaaacgcccactttt
ttcattgcacgaggctagcaaagtattcagtgaggtcttagtctttgcac
agcagagcaacaagcttagccaacactcgggtcaaatctgactgaaggag
tcaataaagccagcaggcaaaccctatggacctagggtaccttggctcaa
gagaatcagctctgatctccagggagaaaaatagaggcccgttctgactg
gtactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_11100407_11100598
seq2: B6Ng01-134C10.b_54_245 (reverse)

seq1  CACCACCACCACCACCATGACCACCTCCACCTCCCACTTGTGTCCCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCACCACCATGACCACCTCCACCTCCCACTTGTGTCCCTCCT  50

seq1  CCTCCTCCTGTGTGCCCAAACACAGCCAGGGCTAACTCATTTCTTCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTGTGTGCCCAAACACAGCCAGGGCTAACTCATTTCTTCAATA  100

seq1  CATTGTGCAATTCCAAAGTAGCACTTAGTAAGTGGAAAGGATTTCAGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGCAATTCCAAAGTAGCACTTAGTAAGTGGAAAGGATTTCAGCAA  150

seq1  GCACTTCCTCTAATACAGAAATTCCGAAGCCCTCTAAGAAGT  192
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCCTCTAATACAGAAATTCCGAAGCCCTCTAAGAAGT  192

seq1: chr8_10973319_10974496
seq2: B6Ng01-134C10.g_68_1224

seq1  GAATTCCTCATTAGTGCAGACACCTCACCCCTATGAACTGTCTCAGGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATTAGTGCAGACACCTCACCCCTATGAACTGTCTCAGGCTC  50

seq1  GACTGTGGCCTCCCCTCTAGGGGATGCATGATACAGATAGCTGAGCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGGCCTCCCCTCTAGGGGATGCATGATACAGATAGCTGAGCAGGG  100

seq1  AACATGCCCCCTACCCCCCAAGGAACTGCTCCAGCCCACTTCCCTCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCCCCCTACCCCCCAAGGAACTGCTCCAGCCCACTTCCCTCATTC  150

seq1  CTAAGTCTAGCTCTTCCTCGGTTTTTCTTTTTCTCTTCTTCAGCAGCGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTCTAGCTCTTCCTCGGTTTTTCTTTTTCTCTTCTTCAGCAGCGCT  200

seq1  TGGGAGAGGGTGCACAGGACTCACAATGTGGGAAGACATGGCTTGCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAGGGTGCACAGGACTCACAATGTGGGAAGACATGGCTTGCTTTA  250

seq1  TTTCCTGATTTTTGAGGGAGTCACGGTAGCTCCATATTTGAAGAGCATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGATTTTTGAGGGAGTCACGGTAGCTCCATATTTGAAGAGCATGA  300

seq1  AAGACCTGGCCAAGGGATATGTGCAGTCACACAGCTGCCTGAGCAACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTGGCCAAGGGATATGTGCAGTCACACAGCTGCCTGAGCAACCAT  350

seq1  CAAACTCTGTCCTGGTTGGAAACTCAGCTTTTGGTAAGGGAAGGTTCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTGTCCTGGTTGGAAACTCAGCTTTTGGTAAGGGAAGGTTCACT  400

seq1  GTGGTGATAAGGATGTAACCCATCTCCCACCATTACTCTTCCTTTGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGATAAGGATGTAACCCATCTCCCACCATTACTCTTCCTTTGAGGT  450

seq1  CCACACAATAAATGCATCTGCCACCTAAGGAATAGCAGAAGCTCATAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAATAAATGCATCTGCCACCTAAGGAATAGCAGAAGCTCATAGAG  500

seq1  GAGTCTTCGGGTGTTGGGATCATGATCCGTACAATGTCATGAGCCCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTCGGGTGTTGGGATCATGATCCGTACAATGTCATGAGCCCCTTG  550

seq1  GGTTATCTTAAACAAACATTTATTTAGTATTACAGGGAATCCATTCGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTTAAACAAACATTTATTTAGTATTACAGGGAATCCATTCGATA  600

seq1  TAAACCGAAGAACAGGCCAAGAGTAACGGTTTCTACGTGAAATCCCAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCGAAGAACAGGCCAAGAGTAACGGTTTCTACGTGAAATCCCAGCA  650

seq1  CTTGGGAGGCTAATGCAATTGAAGCTAGCCAGGGCTATGTAATAAATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAGGCTAATGCAATTGAAGCTAGCCAGGGCTATGTAATAAATTCC  700

seq1  AGACTAGCCTGAGCTATAAAACAATAGCTTAGCTAGTCAACAAAAAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGCCTGAGCTATAAAACAATAGCTTAGCTAGTCAACAAAAAAAGA  750

seq1  AAAGAAAAAAGAAAAGGCAACTCTAGAAATGACTGGTAATCTGCTACAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAAGAAAAGGCAACTCTAGAAATGACTGGTAATCTGCTACAGG  800

seq1  GCAAGGTGACTTCATATGCCGAAGAGTAGATTAGTCTAAAATGTGTGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTGACTTCATATGCCGAAGAGTAGATTAGTCTAAAATGTGTGTAA  850

seq1  TGGAGTTCCAACTTGTAGAAAGAGACATCTGTCCTGCAAAGGGCATGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTCCAACTTGTAGAAAGAGACATCTGTCCTGCAAAGGGCATGAGC  900

seq1  CTTGCATCACATTGAGGCCTTGCACCTGCTGGAAAAGAAACGCCCAACTT  950
      |||||||||||||||||||||||||||||||| |||||||||||||  ||
seq2  CTTGCATCACATTGAGGCCTTGCACCTGCTGG-AAAGAAACGCCCACTTT  949

seq1  TTTCATTGCACGAGGCTAGCAAAGTATTCAGTGAGGTCTTAGTCTTTGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGCACGAGGCTAGCAAAGTATTCAGTGAGGTCTTAGTCTTTGCA  999

seq1  CAAGCAAGAGCAAACAAAGCTTAGCCAACCACTCGGGTCAAATTCTGACC  1050
      | ||| |||||||   |||||||||||| ||||||||||||| ||||| |
seq2  C-AGC-AGAGCAA--CAAGCTTAGCCAA-CACTCGGGTCAAA-TCTGA-C  1042

seq1  TGAAAGAGTCAATAAAGCCAGCCAGGCAAACACCTATGACCCTAGGAGTA  1100
      |||| |||||||||||||||| ||||||||| ||||||  |||||| || 
seq2  TGAAGGAGTCAATAAAGCCAG-CAGGCAAAC-CCTATGGACCTAGG-GT-  1088

seq1  ACCCATGCTCAAGAGAACCAAGCTCTGGATCTCCAGGGAAGAAAAATGAG  1150
      |||   ||||||||||| | |||||| ||||||||||| |||||||| ||
seq2  ACCTTGGCTCAAGAGAATC-AGCTCT-GATCTCCAGGG-AGAAAAAT-AG  1134

seq1  AAGGCCCTGTTTTCTGACTGGTATCTAC  1178
       ||||||    |||||||||||| ||||
seq2  -AGGCCC---GTTCTGACTGGTA-CTAC  1157