BAC Information

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BAC

Clone NameB6Ng01-134K10
Chromosome8 (Build37)
Map Location 9,836,756 - 9,964,319
singlet/doubletdoublet
Overlap genenone
Upstream geneTmem28
Downstream geneLig4, Abhd13, Tnfsf13b, Myo16, LOC100040008, LOC384782, LOC100040507, LOC665306
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134K10.bB6Ng01-134K10.g
ACCDH934894DH934895
length1,1061,081
definitionDH934894|Mus musculus domesticus DNA, BAC clone: B6Ng01-134K10, 5' end.DH934895|Mus musculus domesticus DNA, BAC clone: B6Ng01-134K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,963,199 - 9,964,319)(9,836,756 - 9,837,835)
sequence
gaattcctgcctgtagacgagactggatttcccagactagctattgactc
agatctaaacgatcttccagatcagtgttcaaccttcctaatgctgagag
cctttaaaacagttcctcacgttgtggtgacccccaaccataaaattatt
tttgatgctacttcaaaactataatttgctaccatcatgaataatactat
caatatctgatacgcagaatatctaatatctaatatgtgatcccccaaca
gggtctcgacccacaggttgaaaactgctgccctaaaggctcccatgtga
acataagcttggtttccagtgtaataaagttcaaagtcagactttgggaa
gttactagaccagggtactctggccttgtcaatggattaatgcatcaatt
acttcataataaactgagatgtggtagaaaacagaaaaactgggatattg
gagaaagcaggtcactgaagtaatgtccaagaaggaagaatgtattctgg
tattttaaccctactatctcttccctctcctgtgtcactaccctttcctg
acctctataagttgtgcagctttcttctgttggccctctctcatggtcgt
tctgttcttgcttctgtatattactccatgtacagtgcattcacagactt
gatttcgttaactttaacattaatgcgagaatgagcaaactggatctctt
tgagtttggccagactggtctacatagtgaatctcaggtctgccaaggtt
ttcacaaagagaagggaaggaaactgacttgttcctctagtgattctgtt
agcttctctcagcagacctgaaagactagatctctcctgagtttcagtgg
ttagagcactctctgcaggcaaagttctcctcttgcagggaaggtgacaa
tatcttggcattcagacctgtctcctggcagaagatgaagtcctgaaaca
gggcttgtcccagaatctgtgtagcttctgtagtccacactctcacctgc
acagagtattctctgtgcagatctgagaaccaagatgttccacagatgct
gtgtaagccctctgggcaggtgaacctctcctctgcagaaggtcccggag
tctgga

gaattcaagaatgacccacaggaattgcacttgcttctttttcaatattt
atgagcacaaataaatccaggagtgtttcgtgggcctgtctgctagacat
tctcacagactttcatactgaaaactaaaatccccatgtaagaagactgg
acttgtagaatgaatatttaggtctctttcccctgtagtaatgattcaga
acccactctttctgcctcctacaggagcagtgaggcaccattgtcatgat
tagtgacagtgtcagctgtccctcctaccacagctcttcactgtccatga
ggttatctagccaaactgtctacaaaggacttggccgtgactttctcaat
aaatagaagcttggacgatgggtttggaagaggacaccttctaaattctt
ctgagatgagcccacaggtcaatcctacatgaatttcattgggactgact
gtcctcaggtcggtaactcttaaactctgttgagattgcctccaggttag
catgtggcaacctcagacaaagctgccagtaagaattctgaagggaagct
caaagtgttttctatggtcaagcacatggccctcactgtctgggcatctg
aatcatgaaatgcctgaccatcacctccttctccaactccttccaaacat
cccttgctttttttctgcttgcattccctatgtcaggtcattgcccccta
ctgtcctgggaagagtttttctgctactgcgggagatagattgtttaggg
tgcgcatcacaagacgggggttgaggaagaggcaaaggagagtgttagta
tccacacagtggttggggcgtgcacagctaatgcacgactttttctggcc
attcagtgctgtgaaaaacaaatggatggtctggattcttatcatgtgac
tgatatctacaggaaatgagctgcctgggagcaactgttctgaaagaaga
acataaagagaggcttcacaaaaaacacgtttatgttaccattttttttt
ctcatttgaaacgcattattgaaacctgctgtgggtcagtctcaagtcaa
aaaattcatatctggagatatgaagagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_9963199_9964319
seq2: B6Ng01-134K10.b_47_1152 (reverse)

seq1  TCCAGACACCCGGGCACCTTCCCTGCCAGAGGAGAGGTGTCCACCCCTGC  50
      ||||||| ||  || |||||  ||| ||||||||||||     | |||||
seq2  TCCAGACTCC--GGGACCTT--CTG-CAGAGGAGAGGT----TCACCTGC  41

seq1  CCAGGAGGGCTTTACCACAGCATCTGGTGGAGACATCTTGGTTCTCAGAT  100
      ||| ||||||||   |||||||||| ||||| ||||||||||||||||||
seq2  CCA-GAGGGCTT--ACACAGCATCT-GTGGA-ACATCTTGGTTCTCAGAT  86

seq1  CCTGCACAGAGAATACTCTGTGCAGGTGAGAGTGTGGACTACAGAAGCTA  150
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTGCACAGAGAATACTCTGTGCAGGTGAGAGTGTGGACTACAGAAGCTA  135

seq1  CACAGATTCTGGGACAAGCCCTGTTTCAGACCTTCATCTTCTGCCAGGAG  200
      |||||||||||||||||||||||||||||  |||||||||||||||||||
seq2  CACAGATTCTGGGACAAGCCCTGTTTCAGGACTTCATCTTCTGCCAGGAG  185

seq1  GCAGGTCTGAATGCC-AGATATTTGTCCACCTTCCCTGCAAGAGGAGAAC  249
       |||||||||||||| ||||| |||| |||||||||||||||||||||||
seq2  ACAGGTCTGAATGCCAAGATA-TTGT-CACCTTCCCTGCAAGAGGAGAAC  233

seq1  TTTGCCTGCAGAGAGTGCTCTAACCACTGAAACTCAGGAGAGATCTAGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTGCAGAGAGTGCTCTAACCACTGAAACTCAGGAGAGATCTAGTC  283

seq1  TTTCAGGTCTGCTGAGAGAAGCTAACAGAATCACTAGAGGAACAAGTCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGTCTGCTGAGAGAAGCTAACAGAATCACTAGAGGAACAAGTCAG  333

seq1  TTTCCTTCCCTTCTCTTTGTG-AAACCTTGGCAGACCTGAGATTCACTAT  398
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTCCTTCCCTTCTCTTTGTGAAAACCTTGGCAGACCTGAGATTCACTAT  383

seq1  GTAGACCAGTCTGGCCAAACTCAAAGAGATCCAGTTTGCTCATTCTCGCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGTCTGGCCAAACTCAAAGAGATCCAGTTTGCTCATTCTCGCA  433

seq1  TTAATGTTAAAGTTAACGAAATCAAGTCTGTGAATGCACTGTACATGGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTAAAGTTAACGAAATCAAGTCTGTGAATGCACTGTACATGGAG  483

seq1  TAATATACAGAAGCAAGAACAGAACGACCATGAGAGAGGGCCAACAGAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATACAGAAGCAAGAACAGAACGACCATGAGAGAGGGCCAACAGAAG  533

seq1  AAAGCTGCACAACTTATAGAGGTCAGGAAAGGGTAGTGACACAGGAGAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGCACAACTTATAGAGGTCAGGAAAGGGTAGTGACACAGGAGAGG  583

seq1  GAAGAGATAGTAGGGTTAAAATACCAGAATACATTCTTCCTTCTTGGACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATAGTAGGGTTAAAATACCAGAATACATTCTTCCTTCTTGGACA  633

seq1  TTACTTCAGTGACCTGCTTTCTCCAATATCCCAGTTTTTCTGTTTTCTAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCAGTGACCTGCTTTCTCCAATATCCCAGTTTTTCTGTTTTCTAC  683

seq1  CACATCTCAGTTTATTATGAAGTAATTGATGCATTAATCCATTGACAAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTCAGTTTATTATGAAGTAATTGATGCATTAATCCATTGACAAGG  733

seq1  CCAGAGTACCCTGGTCTAGTAACTTCCCAAAGTCTGACTTTGAACTTTAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTACCCTGGTCTAGTAACTTCCCAAAGTCTGACTTTGAACTTTAT  783

seq1  TACACTGGAAACCAAGCTTATGTTCACATGGGAGCCTTTAGGGCAGCAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGAAACCAAGCTTATGTTCACATGGGAGCCTTTAGGGCAGCAGT  833

seq1  TTTCAACCTGTGGGTCGAGACCCTGTTGGGGGATCACATATTAGATATTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACCTGTGGGTCGAGACCCTGTTGGGGGATCACATATTAGATATTA  883

seq1  GATATTCTGCGTATCAGATATTGATAGTATTATTCATGATGGTAGCAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCTGCGTATCAGATATTGATAGTATTATTCATGATGGTAGCAAAT  933

seq1  TATAGTTTTGAAGTAGCATCAAAAATAATTTTATGGTTGGGGGTCACCAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTTGAAGTAGCATCAAAAATAATTTTATGGTTGGGGGTCACCAC  983

seq1  AACGTGAGGAACTGTTTTAAAGGCTCTCAGCATTAGGAAGGTTGAACACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGAGGAACTGTTTTAAAGGCTCTCAGCATTAGGAAGGTTGAACACT  1033

seq1  GATCTGGAAGATCGTTTAGATCTGAGTCAATAGCTAGTCTGGGAAATCCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGAAGATCGTTTAGATCTGAGTCAATAGCTAGTCTGGGAAATCCA  1083

seq1  GTCTCGTCTACAGGCAGGAATTC  1121
      |||||||||||||||||||||||
seq2  GTCTCGTCTACAGGCAGGAATTC  1106


seq1: chr8_9836756_9837835
seq2: B6Ng01-134K10.g_68_1148

seq1  GAATTCAAGAATGACCCACAGGAATTGCACTTGCTTCTTTTTCAATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAATGACCCACAGGAATTGCACTTGCTTCTTTTTCAATATTT  50

seq1  ATGAGCACAAATAAATCCAGGAGTGTTTCGTGGGCCTGTCTGCTAGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCACAAATAAATCCAGGAGTGTTTCGTGGGCCTGTCTGCTAGACAT  100

seq1  TCTCACAGACTTTCATACTGAAAACTAAAATCCCCATGTAAGAAGACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAGACTTTCATACTGAAAACTAAAATCCCCATGTAAGAAGACTGG  150

seq1  ACTTGTAGAATGAATATTTAGGTCTCTTTCCCCTGTAGTAATGATTCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAGAATGAATATTTAGGTCTCTTTCCCCTGTAGTAATGATTCAGA  200

seq1  ACCCACTCTTTCTGCCTCCTACAGGAGCAGTGAGGCACCATTGTCATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCTTTCTGCCTCCTACAGGAGCAGTGAGGCACCATTGTCATGAT  250

seq1  TAGTGACAGTGTCAGCTGTCCCTCCTACCACAGCTCTTCACTGTCCATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACAGTGTCAGCTGTCCCTCCTACCACAGCTCTTCACTGTCCATGA  300

seq1  GGTTATCTAGCCAAACTGTCTACAAAGGACTTGGCCGTGACTTTCTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTAGCCAAACTGTCTACAAAGGACTTGGCCGTGACTTTCTCAAT  350

seq1  AAATAGAAGCTTGGACGATGGGTTTGGAAGAGGACACCTTCTAAATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAGCTTGGACGATGGGTTTGGAAGAGGACACCTTCTAAATTCTT  400

seq1  CTGAGATGAGCCCACAGGTCAATCCTACATGAATTTCATTGGGACTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATGAGCCCACAGGTCAATCCTACATGAATTTCATTGGGACTGACT  450

seq1  GTCCTCAGGTCGGTAACTCTTAAACTCTGTTGAGATTGCCTCCAGGTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAGGTCGGTAACTCTTAAACTCTGTTGAGATTGCCTCCAGGTTAG  500

seq1  CATGTGGCAACCTCAGACAAAGCTGCCAGTAAGAATTCTGAAGGGAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGCAACCTCAGACAAAGCTGCCAGTAAGAATTCTGAAGGGAAGCT  550

seq1  CAAAGTGTTTTCTATGGTCAAGCACATGGCCCTCACTGTCTGGGCATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGTTTTCTATGGTCAAGCACATGGCCCTCACTGTCTGGGCATCTG  600

seq1  AATCATGAAATGCCTGACCATCACCTCCTTCTCCAACTCCTTCCAAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGAAATGCCTGACCATCACCTCCTTCTCCAACTCCTTCCAAACAT  650

seq1  CCCTTGCTTTTTTTCTGCTTGCATTCCCTATGTCAGGTCATTGCCCCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCTTTTTTTCTGCTTGCATTCCCTATGTCAGGTCATTGCCCCCTA  700

seq1  CTGTCCTGGGAAGAGTTTTTCTGCTACTGCGGGAGATAGATTG-TTAGGG  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGTCCTGGGAAGAGTTTTTCTGCTACTGCGGGAGATAGATTGTTTAGGG  750

seq1  TGCGCATCACAAGACGGGGGTTGAGGAAGAGGCAAAGGAGAGTGTTAGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCATCACAAGACGGGGGTTGAGGAAGAGGCAAAGGAGAGTGTTAGTA  800

seq1  TCCACACAGTGGTT-GGGCGTGCACAGCTAATGCACGAC-TTTTCTGGCC  847
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  TCCACACAGTGGTTGGGGCGTGCACAGCTAATGCACGACTTTTTCTGGCC  850

seq1  ATTCAGTGCTGTGAAAAACAAATGGATGGTCTGTATTCTTATCATGTGAC  897
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTCAGTGCTGTGAAAAACAAATGGATGGTCTGGATTCTTATCATGTGAC  900

seq1  TGATATCTACAGGTAAATGAGCTGCCT-GGAGCAACTGTTCTGAAAGAAG  946
      ||||||||||||| ||||||||||||| ||||||||||||||||||||||
seq2  TGATATCTACAGG-AAATGAGCTGCCTGGGAGCAACTGTTCTGAAAGAAG  949

seq1  AACATAAAGAAGAGGCTTCACAAAAAACACGTTAATGTTTACCATTTTTT  996
      ||||||||| ||||||||||||||||||||||| ||| |||||| |||||
seq2  AACATAAAG-AGAGGCTTCACAAAAAACACGTTTATG-TTACCA-TTTTT  996

seq1  TTTTCTCATTTGAAACGCATCATTGAAAACCTGCTGTTGGTCAGTCTCAA  1046
      |||||||||||||||||||| |||| ||||||||||| ||||||||||||
seq2  TTTTCTCATTTGAAACGCATTATTG-AAACCTGCTGTGGGTCAGTCTCAA  1045

seq1  GTCAGAAAAATCCATA-CTGGAG--ATGAAGAGAAAA  1080
      |||| |||||| |||| ||||||  ||||||||||||
seq2  GTCA-AAAAATTCATATCTGGAGATATGAAGAGAAAA  1081


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