BAC Information

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BAC

Clone NameB6Ng01-135L14
Chromosome8 (Build37)
Map Location 61,031,621 - 61,147,420
singlet/doubletdoublet
Overlap gene4930431L04Rik
Upstream geneGalnt7, LOC100040711
Downstream geneBC030500, LOC665116, LOC436042
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135L14.bB6Ng01-135L14.g
ACCDH935690DH935691
length1,1751,186
definitionDH935690|Mus musculus domesticus DNA, BAC clone: B6Ng01-135L14, 5' end.DH935691|Mus musculus domesticus DNA, BAC clone: B6Ng01-135L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,031,621 - 61,032,815)(61,146,219 - 61,147,420)
sequence
gaattcacatatacaaaatttgcagcaattgaaaaagggatttctgtcac
ttgttgcacttaccattgtatgagagcaaatcatttcaaagtctaatagg
aaatactttcttttgtaagtaggcaccctgtgacagcattttctccagaa
tagccattaaaatcaagacataaaaataactcaaagattaatactttaaa
aaaaaagtctgaggatatttgttgtcttccttttcaagtattttgagcaa
ttacttaggcttggagaaaatcttttcatgtgtgttacattttcgaatga
aggttaaaaaaaagaccccattctttcttctacagggcagccctttaatt
attggcgattagtgtttctctaatttcttacacaaatataaatttagact
ctacatcacacttgtcaaaattggagttgacaatgttcctttcatataca
taatgacaaagtttgtatgacaattcttgttatggaacttaaatatttct
ctttaagcagctgtataaccacaaaaggttctcatctataactctatttt
gttatgtttgctatattctgtattcttaaacctaaaacctacaaagcttt
gaatcatatgacttggaacaaactttatcagatttggctctgttaagatg
cacatgcacatgtttcaatcacgattctagtgtttccagactcaggacat
gattatcttttcattaatttcaagttttagaagttcaatatttttactca
aacattggctataaatcttattatactctgataatatttgttctgccatt
tatatacatgggttaacatttagagtgataattagtgcactattataaca
taaagtgcaaaaaaagtataaggggattgtaagggacacaggacactttt
aatttttgtttaagtggtgtcggttttttgagaatttcatatatatattc
attatacccaaaggcatgctccttcttccatctcccatatttccctatgg
tccccttacccaactcatatcctctctcattctcgtctccctctctcttc
ctgcgttcttttctctctcatctctcttaaatatctgagtcatgtttctg
gccaacttgctagaatgtgctgccatccctaagttataacagcatcagaa
caaacccatgaacatatttcttttt
gaattcttacaaaaaatcagttcacaaagagctaaaaggaaaaaaaatat
gtgtacactggagattattttcttaattgttgctgctctgaatttcctaa
tactatcatgttggaacaggcttgaagatatggaatgtggagccacctag
tgaaatatgttcctggcaatggaaaataattatcactatctcagtgttta
aattttttttttaatttttatttttttctaaaaggagaaaaggtggtgtc
gtgactggggccccaggaggagataccagtgagttttcagatcatgttat
tattcacaattgcttagtggcccactggaatgggtaccgtaaagcaactc
agatataaataaatggaaaaatcaaggaccaaggataaaacaagtaaaaa
aaaaaataagtagtggaagatattttgatagcatgttatttgataatcca
caaatcctagagaccacaaaatcattttgttgcacaattctttgataata
cattagggtggcacatggtttatcttggaggatgcataattatattactt
tatgttatatgcacatatacaagatagccctgaaactctatttcctgaga
tgatcccagaatctcaaaaactattcatagaggagtacaatatgttcagg
taaaatttatagagagtgtaagcattaaactgtagtttaaaaatctatct
ttaaatgcagtgtcttaaaggttatctatagtcacatttcactgtatgaa
gtatagtcaacttgaggcaggtgatgtttgtgggagcccagaggggctgg
ataagatattagttacatgttcctcaattccttgtatctaggtctctttg
actttagagataggaagttttatttattttgctcctagaatatgacttta
attgtagttcatttctacactaatgaaattatggcatctttataaattgt
gattgtattagtattacattccaatgaacttcattggtttcttgtttttc
tttcttctttcttttttttccataaatacacaggaaataaggctcaaggt
tcaaactgatggttttctgtggtgggaagggacatttgggttacttaact
ccaattatctgtaattaatataatatcctttattttctcactcttgaagg
tcaagatacatttaatatggaatgctgtattggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61031621_61032815
seq2: B6Ng01-135L14.b_43_1217

seq1  GAATTCACATATACAAAATTTGCAGCAATTGAAAAAGGGATTTCTGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATATACAAAATTTGCAGCAATTGAAAAAGGGATTTCTGTCAC  50

seq1  TTGTTGCACTTACCATTGTATGAGAGCAAATCATTTCAAAGTCTAATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCACTTACCATTGTATGAGAGCAAATCATTTCAAAGTCTAATAGG  100

seq1  AAATACTTTCTTTTGTAAGTAGGCACCCTGTGACAGCATTTTCTCCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTTCTTTTGTAAGTAGGCACCCTGTGACAGCATTTTCTCCAGAA  150

seq1  TAGCCATTAAAATCAAGACATAAAAATAACTCAAAGATTAATACTTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATTAAAATCAAGACATAAAAATAACTCAAAGATTAATACTTTAAA  200

seq1  AAAAAAGTCTGAGGATATTTGTTGTCTTCCTTTTCAAGTATTTTGAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTCTGAGGATATTTGTTGTCTTCCTTTTCAAGTATTTTGAGCAA  250

seq1  TTACTTAGGCTTGGAGAAAATCTTTTCATGTGTGTTACATTTTCGAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAGGCTTGGAGAAAATCTTTTCATGTGTGTTACATTTTCGAATGA  300

seq1  AGGTTAAAAAAAAGACCCCATTCTTTCTTCTACAGGGCAGCCCTTTAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAAAAAAAGACCCCATTCTTTCTTCTACAGGGCAGCCCTTTAATT  350

seq1  ATTGGCGATTAGTGTTTCTCTAATTTCTTACACAAATATAAATTTAGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCGATTAGTGTTTCTCTAATTTCTTACACAAATATAAATTTAGACT  400

seq1  CTACATCACACTTGTCAAAATTGGAGTTGACAATGTTCCTTTCATATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCACACTTGTCAAAATTGGAGTTGACAATGTTCCTTTCATATACA  450

seq1  TAATGACAAAGTTTGTATGACAATTCTTGTTATGGAACTTAAATATTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACAAAGTTTGTATGACAATTCTTGTTATGGAACTTAAATATTTCT  500

seq1  CTTTAAGCAGCTGTATAACCACAAAAGGTTCTCATCTATAACTCTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGCAGCTGTATAACCACAAAAGGTTCTCATCTATAACTCTATTTT  550

seq1  GTTATGTTTGCTATATTCTGTATTCTTAAACCTAAAACCTACAAAGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTTTGCTATATTCTGTATTCTTAAACCTAAAACCTACAAAGCTTT  600

seq1  GAATCATATGACTTGGAACAAACTTTATCAGATTTGGCTCTGTTAAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATATGACTTGGAACAAACTTTATCAGATTTGGCTCTGTTAAGATG  650

seq1  CACATGCACATGTTTCAATCACGATTCTAGTGTTTCCAGACTCAGGACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCACATGTTTCAATCACGATTCTAGTGTTTCCAGACTCAGGACAT  700

seq1  GATTATCTTTTCATTAATTTCAAGTTTTAGAAGTTCAATATTTTTACTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCTTTTCATTAATTTCAAGTTTTAGAAGTTCAATATTTTTACTCA  750

seq1  AACATTGGCTATAAATCTTATTATACTCTGATAATATTTGTTCTGCCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGGCTATAAATCTTATTATACTCTGATAATATTTGTTCTGCCATT  800

seq1  TATATACATGGGTTAACATTTAGAGTGATAATTAGTGCACTATTATAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATGGGTTAACATTTAGAGTGATAATTAGTGCACTATTATAACA  850

seq1  TAAAGTGCAAAAAAAGTATAAGGGGATTGTAAGGGACACAGGACACTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGCAAAAAAAGTATAAGGGGATTGTAAGGGACACAGGACACTTTT  900

seq1  AATTTTTGTTTAAGTGGTGTCGGTTTTTTGAGAATTTCATATATATATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGTTTAAGTGGTGTCGGTTTTTTGAGAATTTCATATATATATTC  950

seq1  ATTATACCC-AAGGCATGCTCCTTCTTCCATTCCTCCCATATTTCCCTAT  999
      ||||||||| |||||||||||||||||||||  |||||||||||||||||
seq2  ATTATACCCAAAGGCATGCTCCTTCTTCCAT--CTCCCATATTTCCCTAT  998

seq1  GGTCCCCTTACCCAACTTCATATCCTCTCTCATTCTCCTTCTCCCTCTCT  1049
      |||||||||||||||| ||||||||||||||||||| | |||||||||||
seq2  GGTCCCCTTACCCAAC-TCATATCCTCTCTCATTCT-CGTCTCCCTCTCT  1046

seq1  CTCTCTCCTTTCTTTTCTTCTCTCCATCTCTCTTAAATATCTGAGTCCAA  1099
      ||  || | |||||||| ||||| |||||||||||||||||||||||   
seq2  CTTCCTGCGTTCTTTTC-TCTCT-CATCTCTCTTAAATATCTGAGTC---  1091

seq1  TTGTTTCTGCCCATACTTGCTTAGATGTGCTGCCATCCCCTAGGTTATAA  1149
       |||||||| ||| |||||||   |||||||||||| ||||| |||||||
seq2  ATGTTTCTGGCCA-ACTTGCTAGAATGTGCTGCCAT-CCCTAAGTTATAA  1139

seq1  CCAGCCTATCAGAACAAAACCCACAATGAAACAATATTTTCTTTTT  1195
       ||||  ||||||||||| ||    |||||   ||| |||||||||
seq2  -CAGC--ATCAGAACAAACCC----ATGAA--CATA-TTTCTTTTT  1175

seq1: chr8_61146219_61147420
seq2: B6Ng01-135L14.g_68_1253 (reverse)

seq1  AAGCCAATACAGCAATCAATATATTAAATGTATTCTTGAACTTTCAAAGA  50
      |||||||||||||| ||   |||||||||||| |||||| |||   ||||
seq2  AAGCCAATACAGCATTC--CATATTAAATGTA-TCTTGACCTT--CAAGA  45

seq1  GTGAAGAAAATTAAAGATATTATATTAATATACAGAATATGGTGAGTAAA  100
      ||| ||||||| || |||||||||||||| ||||||  || | |||| ||
seq2  GTG-AGAAAATAAAGGATATTATATTAAT-TACAGATAATTG-GAGTTAA  92

seq1  GTAAACCACAAATGGTCCTTCCACCAACAGAAAACCATCAGTTTGAA-CT  149
      ||||  | ||||||  ||||||  | ||||||||||||||||||||| ||
seq2  GTAA--CCCAAATGTCCCTTCCCACCACAGAAAACCATCAGTTTGAACCT  140

seq1  TGAGCCTTATTTCTTGTGGTAATTTATGTGAAAAAAAAAGAAAAGAAAGA  199
      ||||||||||||| ||||   |||||  || ||||||||||||   ||||
seq2  TGAGCCTTATTTCCTGTG--TATTTA--TGGAAAAAAAAGAAA--GAAGA  184

seq1  AAGAAAAACAAGAAACCAATGAAGTTCATTTGGAATGTAATACTAATACA  249
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAGAAAAACAAGAAACCAATGAAGTTCA-TTGGAATGTAATACTAATACA  233

seq1  ATCACAATTTAATAAAGATGCCATAATTTCATTAGTGTAGAAATGAACTA  299
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATCACAATTT-ATAAAGATGCCATAATTTCATTAGTGTAGAAATGAACTA  282

seq1  CAATTAAAGTCATATTCTA-GAGCAAAATAAATAAAACTTCCTATCTCTA  348
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAATTAAAGTCATATTCTAGGAGCAAAATAAATAAAACTTCCTATCTCTA  332

seq1  AAGTCAAAGAGACCTAGATACAAGGAATTGAGGAACATGTAACTAATATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAAGAGACCTAGATACAAGGAATTGAGGAACATGTAACTAATATC  382

seq1  TTATCCAGCCCCTCTGGGCTCCCACAAACATCACCTGCCTCAAGTTGACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCAGCCCCTCTGGGCTCCCACAAACATCACCTGCCTCAAGTTGACT  432

seq1  ATACTTCATACAGTGAAATGTGACTATAGATAACCTTTAAGACACTGCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCATACAGTGAAATGTGACTATAGATAACCTTTAAGACACTGCAT  482

seq1  TTAAAGATAGATTTTTAAACTACAGTTTAATGCTTACACTCTCTATAAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATAGATTTTTAAACTACAGTTTAATGCTTACACTCTCTATAAAT  532

seq1  TTTACCTGAACATATTGTACTCCTCTATGAATAGTTTTTGAGATTCTGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTGAACATATTGTACTCCTCTATGAATAGTTTTTGAGATTCTGGG  582

seq1  ATCATCTCAGGAAATAGAGTTTCAGGGCTATCTTGTATATGTGCATATAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTCAGGAAATAGAGTTTCAGGGCTATCTTGTATATGTGCATATAA  632

seq1  CATAAAGTAATATAATTATGCATCCTCCAAGATAAACCATGTGCCACCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTAATATAATTATGCATCCTCCAAGATAAACCATGTGCCACCCT  682

seq1  AATGTATTATCAAAGAATTGTGCAACAAAATGATTTTGTGGTCTCTAGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTATCAAAGAATTGTGCAACAAAATGATTTTGTGGTCTCTAGGA  732

seq1  TTTGTGGATTATCAAATAACATGCTATCAAAATATCTTCCACTACTTATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGATTATCAAATAACATGCTATCAAAATATCTTCCACTACTTATT  782

seq1  TTTTTTTTTACTTGTTTTATCCTTGGTCCTTGATTTTTCCATTTATTTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTACTTGTTTTATCCTTGGTCCTTGATTTTTCCATTTATTTAT  832

seq1  ATCTGAGTTGCTTTACGGTACCCATTCCAGTGGGCCACTAAGCAATTGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGTTGCTTTACGGTACCCATTCCAGTGGGCCACTAAGCAATTGTG  882

seq1  AATAATAACATGATCTGAAAACTCACTGGTATCTCCTCCTGGGGCCCCAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAACATGATCTGAAAACTCACTGGTATCTCCTCCTGGGGCCCCAG  932

seq1  TCACGACACCACCTTTTCTCCTTTTAGAAAAAAATAAAAATTAAAAAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGACACCACCTTTTCTCCTTTTAGAAAAAAATAAAAATTAAAAAAAA  982

seq1  AATTTAAACACTGAGATAGTGATAATTATTTTCCATTGCCAGGAACATAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAACACTGAGATAGTGATAATTATTTTCCATTGCCAGGAACATAT  1032

seq1  TTCACTAGGTGGCTCCACATTCCATATCTTCAAGCCTGTTCCAACATGAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTAGGTGGCTCCACATTCCATATCTTCAAGCCTGTTCCAACATGAT  1082

seq1  AGTATTAGGAAATTCAGAGCAGCAACAATTAAGAAAATAATCTCCAGTGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAGGAAATTCAGAGCAGCAACAATTAAGAAAATAATCTCCAGTGT  1132

seq1  ACACATATTTTTTTTCCTTTTAGCTCTTTGTGAACTGATTTTTTGTAAGA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATTTTTTTTCCTTTTAGCTCTTTGTGAACTGATTTTTTGTAAGA  1182

seq1  ATTC  1202
      ||||
seq2  ATTC  1186