BAC Information

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BAC

Clone NameB6Ng01-136M07
Chromosome8 (Build37)1 (Build37)
Map Location 59,819,705 - 59,820,542153,321,788 - 153,321,851
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC664948, BC088983, Fbxo8, LOC100040431, EG624433, LOC654355, LOC100040515, Hand2
Downstream geneScrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136M07.bB6Ng01-136M07.g
ACCDH936454DH936455
length837847
definitionDH936454|Mus musculus domesticus DNA, BAC clone: B6Ng01-136M07, 5' end.DH936455|Mus musculus domesticus DNA, BAC clone: B6Ng01-136M07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(59,819,705 - 59,820,542)(153,321,788 - 153,321,851)
sequence
gaattccacccggctctggggcgtgcgtccgacaagcccctagggggaga
aaggagaagggtgaaggccgggctagtagtcgctgcccgctgggcagcat
ctggaggcccgtgcgggatgcaggcgagggggatggagcggcgccgctgg
aggaagtgagttcaccccagagggaaggggaggaaggagcctgggccgtg
cgcgtgagtatgggggaaagaagttgcgagctccggtcctgaggcctcgg
ctctcccaggaggccggtttgccggggacgcggttgctgaggcctttggt
ccttcgtgctccctgagagcgggagcacaaggtgtgactttggagcttca
ggcctcgggatggaagttggaggtcagcaaagcacagtcggtttctggcc
tacccaagcgagcgagcgttcgtttctgagtctgattctgattctccttg
cgcattccctatcacgccctcgctgtttttctcctatagcttcggtttgt
tgatcgttagaacgtggagttatttgcactagaaagccaatgacttttga
atagtgactgaatacttgttaagatagaataacatgctgtgggagccgtt
gtcaaacctggtgctagctgtaccatctgcaagcacctgtatcatggcct
gggtgctgcgatgcagcctgatgaagtcctgtgctttctaagaaggactt
tcaaactggtgggggaaagaagccagctgggagaacaacagcgcctgtct
cttcccttacttcctcaactgaatgtggaggagttgtccccggctctgct
catatgttgtctggacagaagcaggtatgccagggat
gaattctaggacagccagagctatatagtagtgggaccctgctctttcga
tccttttcctcctcgtgggctgccttagcagtcctgatagaagggtttgt
gcctagtctttttacatcttatgctgcattcagttgatatccctggaagg
cctgcccttttctgaaggaaatggaggaggagtaaatcctgtcttgaaaa
accaaaccaaaccaaaacaaagaaacaagaaaaacagtgacccgtgagtg
ctgctctgtgcctgtcttagggttctccagagtcacagaactgatggaat
gtctttgtatatattaaggaaatttgtagtccaactaacccaacaatggg
cagctgtgggtgggaagttcaagaatttagtagttgcttagtcccactgg
gctagttgtttcagctggtcttctgtagacgccggttccaacagatgtgc
tggcaagtaaatgcagacggcaaagaagagcaaatcttcctccttgcaat
gtccttatgtatggcccagattaaaggtatatgccaccacatctggatct
aaaatttgctttgtcacaggctgaccttaagctcagagatctgcttgcct
cagtctggacttaaaggtgtgtactaccttggggtctaagattttcatgg
ccactacctgaggtctctacatcaagatccaggtcagaaacttgacttct
agcctcaagatctggatcacaggtaagccctccagttctggactgtagtt
tattccagatgtagtcaaatcgacaaccaggaacagttgtgacaatgccc
ttccttctgagttggtgtctgtgttgctgtttactctccagttagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59819705_59820542
seq2: B6Ng01-136M07.b_51_887

seq1  GAATTCCACCCGGCTCTGGGGCGTGCGTCCGACAAGCCCCTAGGGGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCCGGCTCTGGGGCGTGCGTCCGACAAGCCCCTAGGGGGAGA  50

seq1  AAGGAGAAGGGTGAAGGCCGGGCTAGTAGTCGCTGCCCGCTGGGCAGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAGGGTGAAGGCCGGGCTAGTAGTCGCTGCCCGCTGGGCAGCAT  100

seq1  CTGGAGGCCCGTGCGGGATGCAGGCGAGGGGGATGGAGCGGCGCCGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGCCCGTGCGGGATGCAGGCGAGGGGGATGGAGCGGCGCCGCTGG  150

seq1  AGGAAGTGAGTTCACCCCAGAGGGAAGGGGAGGAAGGAGCCTGGGCCGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGAGTTCACCCCAGAGGGAAGGGGAGGAAGGAGCCTGGGCCGTG  200

seq1  CGCGTGAGTATGGGGGAAAGAAGTTGCGAGCTCCGGTCCTGAGGCCTCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTGAGTATGGGGGAAAGAAGTTGCGAGCTCCGGTCCTGAGGCCTCGG  250

seq1  CTCTCCCAGGAGGCCGGTTTGCCGGGGACGCGGTTGCTGAGGCCTTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCAGGAGGCCGGTTTGCCGGGGACGCGGTTGCTGAGGCCTTTGGT  300

seq1  CCTTCGTGCTCCCTGAGAGCGGGAGCACAAGGTGTGACTTTGGAGCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCGTGCTCCCTGAGAGCGGGAGCACAAGGTGTGACTTTGGAGCTTCA  350

seq1  GGCCTCGGGATGGAAGTTGGAGGTCAGCAAAGCACAGTCGGTTTCTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCGGGATGGAAGTTGGAGGTCAGCAAAGCACAGTCGGTTTCTGGCC  400

seq1  TACCCAAGCGAGCGAGCGTTCGTTTCTGAGTCTGATTCTGATTCTCCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAGCGAGCGAGCGTTCGTTTCTGAGTCTGATTCTGATTCTCCTTG  450

seq1  CGCATTCCCTATCACGCCCTCGCTGTTTTTCTCCTATAGCTTCGGTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATTCCCTATCACGCCCTCGCTGTTTTTCTCCTATAGCTTCGGTTTGT  500

seq1  TGATCGTTAGAACGTGGAGTTATTTGCACTAGAAAGCCAATGACTTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCGTTAGAACGTGGAGTTATTTGCACTAGAAAGCCAATGACTTTTGA  550

seq1  ATAGTGACTGAATACTTGTTAAGATAGAATAACATGCTGTGGGAGCCGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGACTGAATACTTGTTAAGATAGAATAACATGCTGTGGGAGCCGTT  600

seq1  GTCAAACCTGGTGCTAGCTGTACCATCTGCAAGCACCTGTATCATGGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACCTGGTGCTAGCTGTACCATCTGCAAGCACCTGTATCATGGCCT  650

seq1  GGGTGCTGCGATGCAGCCTGATGAAGTCCTGTGC-TTCTAAGAAGGAC-T  698
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  GGGTGCTGCGATGCAGCCTGATGAAGTCCTGTGCTTTCTAAGAAGGACTT  700

seq1  TCAAACTGGT-GGGGAAAGAAGCCAGCTGGGAGAACAACAGCGCCTGTCT  747
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTGGTGGGGGAAAGAAGCCAGCTGGGAGAACAACAGCGCCTGTCT  750

seq1  CTTCCCTCACTTCCTCAACTGAATGTGGAGGAGTTGTCTCCAGGCTCTTG  797
      ||||||| |||||||||||||||||||||||||||||| || ||||| ||
seq2  CTTCCCTTACTTCCTCAACTGAATGTGGAGGAGTTGTC-CCCGGCTC-TG  798

seq1  CTCACATGGTTGTCTGGACAGAGGCAGGGATGCCCAGGGAT  838
      |||| || |||||||||||||| ||||| ||| ||||||||
seq2  CTCATAT-GTTGTCTGGACAGAAGCAGGTATG-CCAGGGAT  837

seq1: chr1_153321788_153321851
seq2: B6Ng01-136M07.g_75_288

seq1  --------------------------------------------------  0
                                                        
seq2  AGGACAGCCAGAGCTATATAGTAGTGGGACCCTGCTCTTTCGATCCTTTT  50

seq1  --------------------------------------------------  0
                                                        
seq2  CCTCCTCGTGGGCTGCCTTAGCAGTCCTGATAGAAGGGTTTGTGCCTAGT  100

seq1  ----------------------------------------AGGACAGC--  8
                                              ||| | ||  
seq2  CTTTTTACATCTTATGCTGCATTCAGTTGATATCCCTGGAAGGCCTGCCC  150

seq1  ----CAGAGCTATACAGAG-------AAACCCTGTCTCGAAAAACCAAAA  47
          | ||   | |  |||       ||| ||||||| ||||||||   |
seq2  TTTTCTGAAGGAAATGGAGGAGGAGTAAATCCTGTCTTGAAAAACC---A  197

seq1  AACCAAACCAAAACAAA  64
      |||||||||||||||||
seq2  AACCAAACCAAAACAAA  214