BAC Information

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BAC

Clone NameB6Ng01-137G05
Chromosome8 (Build37)
Map Location 127,735,950 - 127,923,287
singlet/doubletdoublet
Overlap geneDisc1
Upstream geneGalnt2, Pgbd5, Cog2, Agt, Capn9, 2310022B05Rik, Ttc13, Arv1, 2310031A18Rik, LOC668444, Trim67, 2810004N23Rik, Gnpat, Exoc8, Gm505, Egln1, Tsnax
Downstream geneSipa1l2, 4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137G05.bB6Ng01-137G05.g
ACCDH936919DH936920
length803822
definitionDH936919|Mus musculus domesticus DNA, BAC clone: B6Ng01-137G05, 5' end.DH936920|Mus musculus domesticus DNA, BAC clone: B6Ng01-137G05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,735,950 - 127,736,751)(127,922,466 - 127,923,287)
sequence
gaattccttcattctcccttcctccgaacggctcccctgggccttaaatc
cctatcctcaaagggatttagagcagcactgtgagagtccaactcagtgg
tgatgtgcaggaattgtcccgccagcgcccagggtgggcttgctttccct
agcctaagaggatcaaacgcggatttgtttttccacagcaaatattttaa
gatggttttccatttcaaaagaaaggtgcagattgcatgccttgatctgt
ctggcaaaagggagtaaagagaatgatatctgtgtgtgcacacccctgca
cgctcacacggcgcacacgagcatgcgtgtacacatgccagcatatgggc
gcattatatgagtgcaagcatgcttgcaaacttacaagcatccaagcaca
tatgtgtacacgaagcacacacgtccgtgtataagcacgtgagcatgtat
gcatgtggtcctgcctgcacatgcataggcatgtacacatgcatacatcc
acgaacttgttgacataagaaagggaaccagagagtgtattttctcacac
atatgttgctaggtaagggaaataaatcaacattgtaagcaacttttgaa
ataccgaaaattaatctctaggtcacaacttctctgcatttaaacgtgct
gggaagcagaaaaagcagcccctggaacttgctgctgtcagcagggatgg
aggacgggccagccggtctttccatcaagggaacatttggcgaggatgtg
cgtcgggctggaagtgagactgcttattgctgagagcgttagcgtttctg
acc
gaattcctgtcctgacttctatcaatgaaggactagggcctggaaataaa
aggcaaagaaatcctgtacttacagcagagggccaaaatcactgggtggg
aaggaaaaattaccataatccccttcaggtcaatccagaagtcacaaggt
agaaagatccctccgtcaccacgtagtaagatgtcacttagaaagcccaa
aacttcctatgaggctgagcctagaagtctcgttccaacagccaggaagg
aagactgtagtttttctatgagtctgtctttatccatcttccctccctgc
cctgctaggctctgactaaaaattccggaaggatgccagctcccaaagtg
attggatctggagtcgatgacgaataataacgcctgctgttattaactgc
aggcgtgttgctcctgggacggtttatttatttattttattttggctcgt
tttttgatatatcgtcctgatctaaatcaagagaatgtgttcttccgtct
ggtacagcccctgaagtctgcagtgaatggaactcccacctctgacgaag
caaccagcttcttcatggttggcaggtgaataaatcggcttttactggga
gccattaaatatggtctggggttgatttactccctgctggcttgcgtgga
agtggagtacagaatacagcaggccaatagcagggcatcttttattcttt
ttttttttttttttttctgagacagggttttctcattatagccctggctg
tcctggaattttattctaattattacagctcattggggagacctgagcag
catccgtgggtggttgggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_127735950_127736751
seq2: B6Ng01-137G05.b_35_837

seq1  GAATTCCTTCATTCTCCCTTCCTCCGAACGGCTCCCCTGGGCCTTAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCATTCTCCCTTCCTCCGAACGGCTCCCCTGGGCCTTAAATC  50

seq1  CCTATCCTCAAAGGGATTTAGAGCAGCACTGTGAGAGTCCAACTCAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCTCAAAGGGATTTAGAGCAGCACTGTGAGAGTCCAACTCAGTGG  100

seq1  TGATGTGCAGGAATTGTCCCGCCAGCGCCCAGGGTGGGCTTGCTTTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGCAGGAATTGTCCCGCCAGCGCCCAGGGTGGGCTTGCTTTCCCT  150

seq1  AGCCTAAGAGGATCAAACGCGGATTTGTTTTTCCACAGCAAATATTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAAGAGGATCAAACGCGGATTTGTTTTTCCACAGCAAATATTTTAA  200

seq1  GATGGTTTTCCATTTCAAAAGAAAGGTGCAGATTGCATGCCTTGATCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTTCCATTTCAAAAGAAAGGTGCAGATTGCATGCCTTGATCTGT  250

seq1  CTGGCAAAAGGGAGTAAAGAGAATGATATCTGTGTGTGCACACCCCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAAAAGGGAGTAAAGAGAATGATATCTGTGTGTGCACACCCCTGCA  300

seq1  CGCTCACACGGCGCACACGAGCATGCGTGTACACATGCCAGCATATGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCACACGGCGCACACGAGCATGCGTGTACACATGCCAGCATATGGGC  350

seq1  GCATTATATGAGTGCAAGCATGCTTGCAAACTTACAAGCATCCAAGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATATGAGTGCAAGCATGCTTGCAAACTTACAAGCATCCAAGCACA  400

seq1  TATGTGTACACGAAGCACACACGTCCGTGTATAAGCACGTGAGCATGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTACACGAAGCACACACGTCCGTGTATAAGCACGTGAGCATGTAT  450

seq1  GCATGTGGTCCTGCCTGCACATGCATAGGCATGTACACATGCATACATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGGTCCTGCCTGCACATGCATAGGCATGTACACATGCATACATCC  500

seq1  ACGAACTTGTTGACATAAGAAAGGGAACCAGAGAGTGTATTTTCTCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACTTGTTGACATAAGAAAGGGAACCAGAGAGTGTATTTTCTCACAC  550

seq1  ATATGTTGCTAGGTAAGGGAAATAAATCAACATTGTAAGCAACTTTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTGCTAGGTAAGGGAAATAAATCAACATTGTAAGCAACTTTTGAA  600

seq1  ATACCGAAAATTAATCTCTAGGTCACAACTTCTCTGCATTTAAACGTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCGAAAATTAATCTCTAGGTCACAACTTCTCTGCATTTAAACGTGCT  650

seq1  GGGAAGCAG-AAAAGCAGCCCCTGGAACTTGCTGCTGTCAGCAGGGATGG  699
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAGAAAAAGCAGCCCCTGGAACTTGCTGCTGTCAGCAGGGATGG  700

seq1  AGGACGGGCCAGCCGGTCTTTCCATCAAGGGAACATTTGGCGAGGATGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGGGCCAGCCGGTCTTTCCATCAAGGGAACATTTGGCGAGGATGTG  750

seq1  CGTCGGGCTGGAAGTGAGACTGCTTATTGCTGAGAGCGTTAGCGTTTCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCGGGCTGGAAGTGAGACTGCTTATTGCTGAGAGCGTTAGCGTTTCTG  800

seq1  ACC  802
      |||
seq2  ACC  803

seq1: chr8_127922466_127923287
seq2: B6Ng01-137G05.g_71_892 (reverse)

seq1  TCCCACCCAACACCCACGGATGCTGCTCAGGTCTCCCCAATGAGCTGTAA  50
      |||| || | ||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCAACCACCCACGGATGCTGCTCAGGTCTCCCCAATGAGCTGTAA  50

seq1  TTAATTAAGAATAAAATTCCAGGACAGCCAGGGCTATACTGAG-AAACCC  99
       ||||| ||||||||||||||||||||||||||||||| |||| ||||||
seq2  -TAATT-AGAATAAAATTCCAGGACAGCCAGGGCTATAATGAGAAAACCC  98

seq1  TGTCTCAGAAAAAAAAAAAAAAAAAAAGAATAAAAGATG-CCTGCTATTG  148
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTCTCAGAAAAAAAAAAAAAAAAAAAGAATAAAAGATGCCCTGCTATTG  148

seq1  GCCTGCTGTATTCTGTACTCCACTTCCACGCAAGCCAGCAGGGAGTAAAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTGTATTCTGTACTCCACTTCCACGCAAGCCAGCAGGGAGTAAAT  198

seq1  CAACCCCAGACCATATTTAATGGCTCCCAGTAAAAGCCGATTTATTCACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCAGACCATATTTAATGGCTCCCAGTAAAAGCCGATTTATTCACC  248

seq1  TGCCAACCATGAAGAAGCTGGTTGCTTCGTCAGAGGTGGGAGTTCCATTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACCATGAAGAAGCTGGTTGCTTCGTCAGAGGTGGGAGTTCCATTC  298

seq1  ACTGCAGACTTCAGGGGCTGTACCAGACGGAAGAACACATTCTCTTGATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGACTTCAGGGGCTGTACCAGACGGAAGAACACATTCTCTTGATT  348

seq1  TAGATCAGGACGATATATCAAAAAACGAGCCAAAATAAAATAAATAAATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGGACGATATATCAAAAAACGAGCCAAAATAAAATAAATAAATA  398

seq1  AACCGTCCCAGGAGCAACACGCCTGCAGTTAATAACAGCAGGCGTTATTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGTCCCAGGAGCAACACGCCTGCAGTTAATAACAGCAGGCGTTATTA  448

seq1  TTCGTCATCGACTCCAGATCCAATCACTTTGGGAGCTGGCATCCTTCCGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTCATCGACTCCAGATCCAATCACTTTGGGAGCTGGCATCCTTCCGG  498

seq1  AATTTTTAGTCAGAGCCTAGCAGGGCAGGGAGGGAAGATGGATAAAGACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAGTCAGAGCCTAGCAGGGCAGGGAGGGAAGATGGATAAAGACA  548

seq1  GACTCATAGAAAAACTACAGTCTTCCTTCCTGGCTGTTGGAACGAGACTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATAGAAAAACTACAGTCTTCCTTCCTGGCTGTTGGAACGAGACTT  598

seq1  CTAGGCTCAGCCTCATAGGAAGTTTTGGGCTTTCTAAGTGACATCTTACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTCAGCCTCATAGGAAGTTTTGGGCTTTCTAAGTGACATCTTACT  648

seq1  ACGTGGTGACGGAGGGATCTTTCTACCTTGTGACTTCTGGATTGACCTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGTGACGGAGGGATCTTTCTACCTTGTGACTTCTGGATTGACCTGA  698

seq1  AGGGGATTATGGTAATTTTTCCTTCCCACCCAGTGATTTTGGCCCTCTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATTATGGTAATTTTTCCTTCCCACCCAGTGATTTTGGCCCTCTGC  748

seq1  TGTAAGTACAGGATTTCTTTGCCTTTTATTTCCAGGCCCTAGTCCTTCAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTACAGGATTTCTTTGCCTTTTATTTCCAGGCCCTAGTCCTTCAT  798

seq1  TGATAGAAGTCAGGACAGGAATTC  822
      ||||||||||||||||||||||||
seq2  TGATAGAAGTCAGGACAGGAATTC  822