BAC Information

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BAC

Clone NameB6Ng01-137I18
Chromosome8 (Build37)
Map Location 59,284,744 - 59,390,430
singlet/doubletdoublet
Overlap genenone
Upstream geneAdam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
Downstream geneLOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137I18.bB6Ng01-137I18.g
ACCDH937039DH937040
length1,154922
definitionDH937039|Mus musculus domesticus DNA, BAC clone: B6Ng01-137I18, 5' end.DH937040|Mus musculus domesticus DNA, BAC clone: B6Ng01-137I18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,389,267 - 59,390,430)(59,284,744 - 59,285,401)
sequence
gaattctttgttcagctctgagccccatttaataaccccaaataacattc
ttacctatctaggaactctgcaattacagtaatgagcagcctgacaagac
aggttcatgggtgaaatggtgggatgaatgttaccaattgctctctggta
ggatataaagctcacacggcaggatggaacacatgcctggtgtaggaaat
ctgaccaagagcccatgactaaagagctcatggacctcacaggagaaatt
actactgctgttttgctaaatgggcacaatataaaactaccttctagaga
tatgtatctttacccatagactaataaaaatatatttaaggtacaatttt
attcatttatcatattaaatgaatgttttattagtaaaaatgcattttca
gcacatataagtttatacataagatatctatttgcaaaagcatgttagaa
attatttttataaattataaaaacacaaaattcatggatcattctaattt
cataaataatgatgaaacaaaaagctactatgcatgtttaaaaattaacc
taaatgtatgtaaaagcaaagactatataataccataatattatgaataa
tgaaattagccccaaaactcagcatgtgatagatgtttttgtaagtgtct
ttcactgtattaaaataaaggtttgtgaggcgttaccggtaaggacaaag
ccttgcttagctccttcctagctatgtggtagactgaataaattaatttc
ttgctttgccaggctcataagtttaaaacatagagttagaatcacagttc
attataattgaacacttagtctgcaatcaactcaagctattacataggaa
aataaattatcttatcataaaggtaaagaatgtgtgaacactttaactcc
ctattttaaagcataactgttctctgcaaatagaattatctagaaagtag
aatattcaagtgcattgatcatagaacattatcgctacctttccatctgt
taaacccctcatgtgataaccacttcaccttagactcttataaatagaat
gattcccaaacccattttcgcgagcatatttcatttggcagcactggctg
gccattagcagcttttaggttccagagaatttaatatgaaggaataggca
ggcg
gaattctttgaaggtgaataattagatgagaaattttagttttaggagta
tattttcctatatacataaaaatcatgtgctcttctatgcctttgttgta
tcctttctaatacaatctattttttattctataatgtttcaaaatcaatt
ttaatactcctttgtagtctcccctcccctagcctgaaacctgcttgctc
ggggtggagcttcttgctcatttattctgccacgcccactgctggaacct
gcggagccacacacgtgcacctttctactggaccagagattattcggcgg
gaatcgggtcccctcccctttccttcataactagtgtcgcaacaataaaa
tttgagccttgatcagagtaactgtcttggctacattcttttctctcgcc
acctagcccctcttctcttccaggtttccaaaatgcctttccaggctaga
acccaggttgtggtctgctggccggacacaacaattggcgcaccaacgcg
ggactgagaaacggcaaaggatttttggaagagacgctgctggttcggag
ctccataaaataaaggataagggaaattcataccggagaaggtatgggct
aagctgagacagcgttaaacccaagcgctggttcacttaggttcagcagt
gaggagctgggtatcaggcagtaggccgtagctctctgaagctacatgag
gtgtgagaaaagaaagggtttattaaaaggaataggcggattgccccagt
taataaaaaatgcatcataagggaggaaaatgtcccaaaaagcagagaga
aatatctctctgggccttatagcagagtactctgttcccttttgtgtctt
gtctaatgtccggtgcaccaatctgttctcgtgttcaattcatgtatgtt
cgtgtccagtctgtatgaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59389267_59390430
seq2: B6Ng01-137I18.b_44_1197 (reverse)

seq1  CGCCTGCCTATTCTGTCATAATTAAAAATCTCTGAGAAACCTAAAAGCTG  50
      |||||||||||||  |||||  | ||| |||||  | |||||||||||||
seq2  CGCCTGCCTATTCCTTCATA--TTAAATTCTCT--GGAACCTAAAAGCTG  46

seq1  CTAATGGCCAGCCAAGTGCTTGCCAAATGAAATATGCTCGCGAAAATGGG  100
      ||||||||||||| ||||| ||||||||||||||||||||||||||||||
seq2  CTAATGGCCAGCC-AGTGC-TGCCAAATGAAATATGCTCGCGAAAATGGG  94

seq1  TTTTTGGGAATCATTCTATTTATAAGAGTCTAAAGGTGAAGTGGTTATCA  150
        ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  --TTTGGGAATCATTCTATTTATAAGAGTCT-AAGGTGAAGTGGTTATCA  141

seq1  CATGGAGGGGTTTAACAGATGGAAAGGTAGCGATAATGTTCTATGATCAA  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAT-GAGGGGTTTAACAGATGGAAAGGTAGCGATAATGTTCTATGATCAA  190

seq1  TGCACTTGAATATTCTACTTTCTAGATAATTCTATTTGCAGAGAACAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTGAATATTCTACTTTCTAGATAATTCTATTTGCAGAGAACAGTT  240

seq1  ATGCTTTAAAATAGGGAGTTGAAGTGTTCACACATTCTTTACCTTTATGA  300
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATGCTTTAAAATAGGGAGTTAAAGTGTTCACACATTCTTTACCTTTATGA  290

seq1  TAAGATAATTTATTTTCCTATGTAATAGCTTGAGTTGATTGCAGACTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAATTTATTTTCCTATGTAATAGCTTGAGTTGATTGCAGACTAAG  340

seq1  TGTTCAATTATAATGAACTGTGATTCTAACTCTATGTTTTAAACTTATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAATTATAATGAACTGTGATTCTAACTCTATGTTTTAAACTTATGA  390

seq1  GCCTGGCAAAGCAAGAAATTAATTTATTCAGTCTACCACATAGCTAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCAAAGCAAGAAATTAATTTATTCAGTCTACCACATAGCTAGGAA  440

seq1  GGAGCTAAGCAAGGCTTTGTCCTTACCGGTAACGCCTCACAAACCTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAAGCAAGGCTTTGTCCTTACCGGTAACGCCTCACAAACCTTTAT  490

seq1  TTTAATACAGTGAAAGACACTTACAAAAACATCTATCACATGCTGAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATACAGTGAAAGACACTTACAAAAACATCTATCACATGCTGAGTTT  540

seq1  TGGGGCTAATTTCATTATTCATAATATTATGGTATTATATAGTCTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTAATTTCATTATTCATAATATTATGGTATTATATAGTCTTTGCT  590

seq1  TTTACATACATTTAGGTTAATTTTTAAACATGCATAGTAGCTTTTTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATACATTTAGGTTAATTTTTAAACATGCATAGTAGCTTTTTGTTT  640

seq1  CATCATTATTTATGAAATTAGAATGATCCATGAATTTTGTGTTTTTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTATTTATGAAATTAGAATGATCCATGAATTTTGTGTTTTTATAA  690

seq1  TTTATAAAAATAATTTCTAACATGCTTTTGCAAATAGATATCTTATGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAAATAATTTCTAACATGCTTTTGCAAATAGATATCTTATGTAT  740

seq1  AAACTTATATGTGCTGAAAATGCATTTTTACTAATAAAACATTCATTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTATATGTGCTGAAAATGCATTTTTACTAATAAAACATTCATTTAA  790

seq1  TATGATAAATGAATAAAATTGTACCTTAAATATATTTTTATTAGTCTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAAATGAATAAAATTGTACCTTAAATATATTTTTATTAGTCTATG  840

seq1  GGTAAAGATACATATCTCTAGAAGGTAGTTTTATATTGTGCCCATTTAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGATACATATCTCTAGAAGGTAGTTTTATATTGTGCCCATTTAGC  890

seq1  AAAACAGCAGTAGTAATTTCTCCTGTGAGGTCCATGAGCTCTTTAGTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCAGTAGTAATTTCTCCTGTGAGGTCCATGAGCTCTTTAGTCAT  940

seq1  GGGCTCTTGGTCAGATTTCCTACACCAGGCATGTGTTCCATCCTGCCGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTTGGTCAGATTTCCTACACCAGGCATGTGTTCCATCCTGCCGTG  990

seq1  TGAGCTTTATATCCTACCAGAGAGCAATTGGTAACATTCATCCCACCATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTTATATCCTACCAGAGAGCAATTGGTAACATTCATCCCACCATT  1040

seq1  TCACCCATGAACCTGTCTTGTCAGGCTGCTCATTACTGTAATTGCAGAGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCATGAACCTGTCTTGTCAGGCTGCTCATTACTGTAATTGCAGAGT  1090

seq1  TCCTAGATAGGTAAGAATGTTATTTGGGGTTATTAAATGGGGCTCAGAGC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGATAGGTAAGAATGTTATTTGGGGTTATTAAATGGGGCTCAGAGC  1140

seq1  TGAACAAAGAATTC  1164
      ||||||||||||||
seq2  TGAACAAAGAATTC  1154

seq1: chr8_59284744_59285401
seq2: B6Ng01-137I18.g_67_724

seq1  GAATTCTTTGAAGGTGAATAATTAGATGAGAAATTTTAGTTTTAGGAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAAGGTGAATAATTAGATGAGAAATTTTAGTTTTAGGAGTA  50

seq1  TATTTTCCTATATACATAAAAATCATGTGCTCTTCTATGCCTTTGTTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCTATATACATAAAAATCATGTGCTCTTCTATGCCTTTGTTGTA  100

seq1  TCCTTTCTAATACAATCTATTTTTTATTCTATAATGTTTCAAAATCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTAATACAATCTATTTTTTATTCTATAATGTTTCAAAATCAATT  150

seq1  TTAATACTCCTTTGTAGTCTCCCCTCCCCTAGCCTGAAACCTGCTTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACTCCTTTGTAGTCTCCCCTCCCCTAGCCTGAAACCTGCTTGCTC  200

seq1  GGGGTGGAGCTTCTTGCTCATTTATTCTGCCACGCCCACTGCTGGAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGAGCTTCTTGCTCATTTATTCTGCCACGCCCACTGCTGGAACCT  250

seq1  GCGGAGCCACACACGTGCACCTTTCTACTGGACCAGAGATTATTCGGCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGCCACACACGTGCACCTTTCTACTGGACCAGAGATTATTCGGCGG  300

seq1  GAATCGGGTCCCCTCCCCTTTCCTTCATAACTAGTGTCGCAACAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGGGTCCCCTCCCCTTTCCTTCATAACTAGTGTCGCAACAATAAAA  350

seq1  TTTGAGCCTTGATCAGAGTAACTGTCTTGGCTACATTCTTTTCTCTCGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCCTTGATCAGAGTAACTGTCTTGGCTACATTCTTTTCTCTCGCC  400

seq1  ACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCCAGGCTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCCAGGCTAGA  450

seq1  ACCCAGGTTGTGGTCTGCTGGCCGGACACAACAATTGGCGCACCAACGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGTTGTGGTCTGCTGGCCGGACACAACAATTGGCGCACCAACGCG  500

seq1  GGACTGAGAAACGGCAAAGGATTTTTGGAAGAGACGCTGCTGGTTCGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAGAAACGGCAAAGGATTTTTGGAAGAGACGCTGCTGGTTCGGAG  550

seq1  CTCCATAAAATAAAGGATAAGGGAAATTCATACCGGAGAAGGTATGGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAAAATAAAGGATAAGGGAAATTCATACCGGAGAAGGTATGGGCT  600

seq1  AAGCTGAGACAGCGTTAAACCCAAGCGCTGGTTCACTTAGGTTCAGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAGACAGCGTTAAACCCAAGCGCTGGTTCACTTAGGTTCAGCAGT  650

seq1  GAGGAGCT  658
      ||||||||
seq2  GAGGAGCT  658