BAC Information

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BAC

Clone NameB6Ng01-138I17
Chromosome8 (Build37)
Map Location 59,664,554 - 59,665,091
singlet/doubletsinglet
Overlap genenone
Upstream geneHpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433, LOC654355
Downstream geneLOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138I17.bB6Ng01-138I17.g
ACCDH937775DH937776
length1,2191,099
definitionDH937775|Mus musculus domesticus DNA, BAC clone: B6Ng01-138I17, 5' end.DH937776|Mus musculus domesticus DNA, BAC clone: B6Ng01-138I17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccatagctgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaattctttcttcagagatttgaagtttttatcatac
agatctttcaccttccttagttagagtcacgccaagatatttatattatt
tgtggactattgaggagggtgttgtttccctatttctttttcagcctgtt
tattctttgtatagagaagggcatggactgttgagtttatttatatccgc
tacttcaccgaagctgttatcagttaggagtttctggtagaattttaggg
ttacttattatacttcataccttcgcaaaagtgtaattgactttcccttt
tccattggtactctggatccttggtgtcgatggtctggccaactcagacc
ttagggaagggggaaagtg
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaaactcctcgtttggttaattctttg
aatagttcttcttgttccactgggttgatttcacccctgagtttatttcc
tgccgtctactcctcttgggtgatttgcttcttttttttctagagctttt
agtgtggttgtcaagctgctagtatgtgctctctcccgtttttcttgaag
cactcatagctatgagtttctctctaagaatgctttcattgtgtccaaag
gtttgggtacgtgttgtcttcatttttcattaactctaaaaagtttaaga
ttctttcttattccttccttgaccaggtatctatgagaagaaaggtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59664554_59665091
seq2: B6Ng01-138I17.g_638_1166 (reverse)

seq1  AACAC---TCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGA  47
      |||||   ||||||||  |||||| |||||||||||||||| ||||||||
seq2  AACACCTTTCTTCTCATAGATACC-TGGTCAAGGAAGGAAT-AAGAAAGA  48

seq1  AATTAAAGACTTTTTAGAGTTTAATG-AAAATGAAGCCACAACGTACCCA  96
      |  | || ||||||||||| |||||| ||||||||| ||  |||||||||
seq2  ATCTTAA-ACTTTTTAGAG-TTAATGAAAAATGAAGACAACACGTACCCA  96

seq1  AACCTTTGGGACACAATGAAAGCATTTCTAAGAGGGAAACTCATAGCTAT  146
      ||||||| |||||||||||||||| |||| |||| |||||||||||||||
seq2  AACCTTT-GGACACAATGAAAGCA-TTCTTAGAGAGAAACTCATAGCTAT  144

seq1  GAGTGCCTTCAAGAAAAAACGGGAGAGAGCACATACTAGCAGCTTGACAA  196
      ||||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGTG-CTTCAAG-AAAAACGGGAGAGAGCACATACTAGCAGCTTGACAA  192

seq1  -CACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCCAAGAGGAG  245
       |||| |||||||||||||||||||| |||||||| ||||||||||||||
seq2  CCACA-CTAAAAGCTCTAGAAAAAAAAGAAGCAAA-TCACCCAAGAGGAG  240

seq1  TAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAA  295
      |||||||||||||||    |||||||||||||||||||||| ||||| ||
seq2  TAGACGGCAGGAAAT----AAACTCAGGGGTGAAATCAACCCAGTGG-AA  285

seq1  CAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAG-TTGGTTCTTTGA  344
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTTGGTTCTTTGA  335

seq1  GAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACA  385

seq1  GGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACA  444
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGGACAAAATCCTAATTAACAAAATCAGAACTGAAAAGGGAGACATAACA  435

seq1  ACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCT  485

seq1  ATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTC  538
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTC  529