BAC Information

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BAC

Clone NameB6Ng01-140E18
Chromosome8 (Build37)
Map Location 131,352,828 - 131,353,833
singlet/doubletsinglet
Overlap geneLOC100042659
Upstream geneNrp1, LOC668494, Itgb1
Downstream geneLOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140E18.bB6Ng01-140E18.g
ACCDH939066DH939067
length9951,199
definitionDH939066|Mus musculus domesticus DNA, BAC clone: B6Ng01-140E18, 5' end.DH939067|Mus musculus domesticus DNA, BAC clone: B6Ng01-140E18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgtgcatctacttgcattttgctaaattatattctgaatttg
aatgtacttgaatgtgttatttttaattggctcagttttaaaattcatat
tgtttatcttatgcctacttaatacatactagaatttccttacaagagag
aatccacaaaaatgttgcctatgcaattacatagttactatagataataa
gtaattataaatatatgacttgaaatgacttgatcattcctatataaata
aaatattcagtaaaatatgttgcacacagacattgttaaatagtacctga
agtctttaataactgctgtaaggctttagagattcttgaccttccccttg
atgccctataaactggttttggagctacatccacatttgctgaagtgctt
cccaaggatttttctagaaaaatttagattgttatgtataagatgcatca
gctttgtagaacctcttaatagcctcataaactagttgtaaataaaaatg
aaattaaaagactgtggataattaaaaataaaatattttggcataattaa
ttctattaagaatataaatatgttcaccacagaggaaagctttgggggaa
ttgtaggattctatttctatgatatctaatacaagaccttccagaaacaa
agcatttgtagttgtctagaactgtggttctaaaggagctagaggataat
agttaagaattatggtggttttttccctctttggtaaagaattgtagttg
ctgtagtcagatatatggggaatagggacataccccctcattactggggg
gctacacaggctctggttaagtgcagtcgatcacaaaacaaaacacccat
taactgagctaagaaaggatggggatagatgatgatgtgagtagagtaaa
gtgcatagaggtgagatatccataactatgtgtgtatgtgtgtgcgtcta
aaatggaaacagaatctatataaaacttttcacagaatcagaaaa
gaattctttcccactggggccagagaaatgagaaagggatccaaagcagg
caacagagtcatagactgttccccactttaattgttaggggccaacatga
aaaacaacctgcacatctgttacaaatggcataggtccatcctgtgcatg
gtctttggttgaaaatttagtctctgtgagcccctataggatcaagttag
tttagtctgtaggtctttttgtggggtccttgatgtatcagactccctca
agccttcccccaactcttccaccaaactccctgagttgtacctattgttt
gactgtgggtctctgcatctgtttcagtcagctgctagataagagctctc
agaagacagttatgttaggtccctgtctgcaagtcattatcattaataat
gttaggggtcggctctttcctataaggagggtctcaagttgggccaggca
ttagttggccattccctagatatctgctccatctttatccctgcactttt
tgaaagcaggagaaattttgggtccaaggttttgtagatgggctggctga
tgtctgccttcttcaaccgcaagtctgaactggctgcaggaagtgaagtc
ttcaggctccatatccctagctggtacatggctcagctaaggtcaccccc
atagattcctggacacctaccatatccctgagatgctgtcttagtcaggg
tttctattcctgcacaaacatcatgaccaagaagcaagttggggaggaaa
gaatttactcagcttacacttccacattgctgctcatcaccaaaagaagt
cagaactggaactcaagcaggtcaggaagcagaatgtgatgcagagcatt
ggagggatgtttcttactggcttgcttctctggcttgctcagcttgcttt
tttatagaatccagactctcagctcaggatggcaccactcacatggggct
cttcctccttgatcactaatgagaaatgcttactgtctggatctcatgag
catttctcactggaggcttcttttctgtactccagtctgtgtcaggagac
acactaacagccaggaataagagcctcccactgatttcgtttctttccag
ctcctccaatccttagaaaaggaatgattagatataaagttatcgattgg
gcactgaattggatcatctggtatggaaaggtgtgggaggaataagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_131352828_131353833
seq2: B6Ng01-140E18.b_44_1038

seq1  GAATTCTGTGTGCATCTACTTGCATTTTGCTAAATTATATTCTGAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTGCATCTACTTGCATTTTGCTAAATTATATTCTGAATTTG  50

seq1  AATGTACTTGAATGTGTTATTTTTAATTGGCTCAGTTTTAAAATTCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACTTGAATGTGTTATTTTTAATTGGCTCAGTTTTAAAATTCATAT  100

seq1  TGTTTATCTTATGCCTACTTAATACATACTAGAATTTCCTTACAAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCTTATGCCTACTTAATACATACTAGAATTTCCTTACAAGAGAG  150

seq1  AATCCACAAAAATGTTGCCTATGCAATTACATAGTTACTATAGATAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACAAAAATGTTGCCTATGCAATTACATAGTTACTATAGATAATAA  200

seq1  GTAATTATAAATATATGACTTGAAATGACTTGATCATTCCTATATAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATAAATATATGACTTGAAATGACTTGATCATTCCTATATAAATA  250

seq1  AAATATTCAGTAAAATATGTTGCACACAGACATTGTTAAATAGTACCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCAGTAAAATATGTTGCACACAGACATTGTTAAATAGTACCTGA  300

seq1  AGTCTTTAATAACTGCTGTAAGGCTTTAGAGATTCTTGACCTTCCCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTAATAACTGCTGTAAGGCTTTAGAGATTCTTGACCTTCCCCTTG  350

seq1  ATGCCCTATAAACTGGTTTTGGAGCTACATCCACATTTGCTGAAGTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTATAAACTGGTTTTGGAGCTACATCCACATTTGCTGAAGTGCTT  400

seq1  CCCAAGGATTTTTCTAGAAAAATTTAGATTGTTATGTATAAGATGCATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGATTTTTCTAGAAAAATTTAGATTGTTATGTATAAGATGCATCA  450

seq1  GCTTTGTAGAACCTCTTAATAGCCTCATAAACTAGTTGTAAATAAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTAGAACCTCTTAATAGCCTCATAAACTAGTTGTAAATAAAAATG  500

seq1  AAATTAAAAGACTGTGGATAATTAAAAATAAAATATTTTGGCATAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAAGACTGTGGATAATTAAAAATAAAATATTTTGGCATAATTAA  550

seq1  TTCTATTAAGAATATAAATATGTTCACCACAGAGGAAAGCTTTGGGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTAAGAATATAAATATGTTCACCACAGAGGAAAGCTTTGGGGGAA  600

seq1  TTGTAGGATTCTATTTCTATGATATCTAATACAAGACCTTCCAGAAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGATTCTATTTCTATGATATCTAATACAAGACCTTCCAGAAACAA  650

seq1  AGCATTTGTAGTTGTCTAGAACTGTGGTTCTAAAGGAGCTAGAGGATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGTAGTTGTCTAGAACTGTGGTTCTAAAGGAGCTAGAGGATAAT  700

seq1  AGTTAAGAATTATGGTGGTTTTTTCCCTCTTTGGTAAAGAATTGTAGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGAATTATGGTGGTTTTTTCCCTCTTTGGTAAAGAATTGTAGTTG  750

seq1  CTGTAGTCAGATATATGGGGAATAGGGACATACCCCCTCATTACTGGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTCAGATATATGGGGAATAGGGACATACCCCCTCATTACTGGGGG  800

seq1  GCTACACAGGCTCTGGTTAAGTGCAGTCGATCACAAAACAAAACACCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACAGGCTCTGGTTAAGTGCAGTCGATCACAAAACAAAACACCCAT  850

seq1  TAACTGAGCTAAGAAAGGATGGGGATAGATGATGATGTGAGTAGAGTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAGCTAAGAAAGGATGGGGATAGATGATGATGTGAGTAGAGTAAA  900

seq1  GGTGCATAGAGGTGAGAATATCCATAACTATGTGTGTATGTGTGTGTGTT  950
       ||||||||||||||| ||||||||||||||||||||||||||||| || 
seq2  -GTGCATAGAGGTGAG-ATATCCATAACTATGTGTGTATGTGTGTGCGTC  948

seq1  TAAAATTGTAAAAGAAGAAATTTAATTAATAAAAACTTTTCACAGAATTC  1000
      |||||| | || ||||   || |        |||||||||||||||| ||
seq2  TAAAATGGAAACAGAATCTATAT--------AAAACTTTTCACAGAA-TC  989

seq1  AGAAAA  1006
      ||||||
seq2  AGAAAA  995