BAC Information

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BAC

Clone NameB6Ng01-143B13
Chromosome8 (Build37)
Map Location 117,892,614 - 118,076,297
singlet/doubletdoublet
Overlap genenone
Upstream geneAI427515, Clec3a, Wwox
Downstream geneMaf, LOC384868, LOC668233, Dynlrb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143B13.bB6Ng01-143B13.g
ACCDH941124DH941125
length1,1211,022
definitionDH941124|Mus musculus domesticus DNA, BAC clone: B6Ng01-143B13, 5' end.DH941125|Mus musculus domesticus DNA, BAC clone: B6Ng01-143B13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,892,614 - 117,893,771)(118,075,276 - 118,076,297)
sequence
gaattcactctgtagaccaggctggctttgaactcactgaggtccacctg
cttctgcctcctgagtgctggcatgaggagtggccataaccttttattta
ctttatatttatttatattatcccccttatattttgaggaaggtcatttc
tctgaacctggagttcaccaattcagctaatctggatgccggagaaccac
agaaatcctcctgtttctgcctctctggtgctgggatttaacagcactgt
cctattcagtttttttttttttttttttttttttttgtataggttctggg
gaattgaacccaggtcctcatgctcacatagcaagcatgttaataactaa
gccatcacctctgccccacacagctccttcttattatgagctttaaaaga
aatatactccatccacagggccgttgactcttagctctccagggacaacc
tagtaagttttacagccatccagagcgcgcaagaggacatttgtaattaa
attctttagtgctctacttgaccccatttcaactgggccataagttttgg
ggggaaaaaacaccctctcaagtccaaaattttaaataatgcttatgagt
tggtttagaacacgggctgctcatattaccccaatggtgggaaagacttt
gatcactgggactgatctcgggacacggtcggggaaaggacaatgacggt
tccaattaaaatgttttcaggagtctctgcataacaacaggaacttgcct
ataattacagatgaaataataattaaaaagagcccttgtaatcctgtgtg
tagtagctcacggttggtgtctgggtaccaagacaaatacctccctagaa
atgggagccacaggaacaattaaagaataaatcctggtctctcattaaca
cccgactctattaactgactcgcttttcgtcacattaagctcatggagtt
gctggtggctggggagaaaacagttggacccacagaatggacatgcaatt
cagtcagtaatctctcttaattgctaatagtgtaactgctggcatagctg
ctggaacggcgaatgaaattttcccattttccttgctctctaagatagct
tgggaggattctcttgagact
gaattccacctagggaaatccagagaagtgagtgacagctgagtgtagtg
acagagatggaaaagaatccttctgtgtgagaaataaacaaattacaagt
gaaaagaggatgagagagagagttatcttgtgtcattggttccccaggcc
cccgggagtcacagcaaagcagcactgggaggttgatattcatgctccca
tgcacacctagtgggtgcacacctactgggtgcattgcaaggggcaagaa
gattagtgtctgactcttttctgggaagtgttggtgaagtagaagggact
gctttcttaagtgtcacggcattggccttgaaatggagaaagcatcaact
ttaagtccatgaccatgtaggaatctgtgtgtatgtgtgtgtgtatgtac
ttgtgcatacatgtgggtatacgtgcatgcagtacagacaagcttaaatg
tgtgctcatgtgtgcacacgtggggtggcttgccactgtgcatgtgtgtg
catctgtagctatgaatgttctggattcctgtgtgagtgcatcctcactg
aaacaggctcagaggtcaaggcattgctggtcaaacatagagctaccttc
cttattttttaatttaactccatgtttcatattatttattttgtttactt
agttatgagatagactctcatgtactttcgagcttgtctatagctcccta
tgtaaccatcgacgaccttgaactttgggtcctctgacctttacttcctg
agtgtgatggaactgtaggcatgccccatgatgcctggtttatacaaccc
tggggatagttcctcgctgcatgccaagcaagccctttctaccaaacagg
tcttcagccccagagggcggaatctccaaagcccttcgcttcattcactg
cttgctctagtctccactgggaacccagcaaagatccagcccatcagata
gcagcgatctgggctgctacagctaattacccagcacagatcattacagt
catttgcctggctggaattgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_117892614_117893771
seq2: B6Ng01-143B13.b_49_1169

seq1  GAATTCACTCTGTAGACCAGGCTGGCTTTGAACTCACTGAGGTCCACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCTTTGAACTCACTGAGGTCCACCTG  50

seq1  CTTCTGCCTCCTGAGTGCTGGCATGAGGAGTGGCCATAACCTTTTATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCCTCCTGAGTGCTGGCATGAGGAGTGGCCATAACCTTTTATTTA  100

seq1  CTTTATATTTATTTATATTATCCCCCTTATATTTTGAGGAAGGTCATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATTTATTTATATTATCCCCCTTATATTTTGAGGAAGGTCATTTC  150

seq1  TCTGAACCTGGAGTTCACCAATTCAGCTAATCTGGATGCCGGAGAACCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACCTGGAGTTCACCAATTCAGCTAATCTGGATGCCGGAGAACCAC  200

seq1  AGAAATCCTCCTGTTTCTGCCTCTCTGGTGCTGGGATTTAACAGCACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCCTCCTGTTTCTGCCTCTCTGGTGCTGGGATTTAACAGCACTGT  250

seq1  CCTATTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATAGGTTCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATAGGTTCTGGG  300

seq1  GAATTGAACCCAGGTCCTCATGCTCACATAGCAAGCATGTTAATAACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAACCCAGGTCCTCATGCTCACATAGCAAGCATGTTAATAACTAA  350

seq1  GCCATCACCTCTGCCCCACACAGCTCCTTCTTATTATGAGCTTTAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCACCTCTGCCCCACACAGCTCCTTCTTATTATGAGCTTTAAAAGA  400

seq1  AATATACTCCATCCACAGGGCCGTTGACTCTTAGCTCTCCAGGGACAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTCCATCCACAGGGCCGTTGACTCTTAGCTCTCCAGGGACAACC  450

seq1  TAGTAAGTTTTACAGCCATCCAGAGCGCGCAAGAGGACATTTGTAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGTTTTACAGCCATCCAGAGCGCGCAAGAGGACATTTGTAATTAA  500

seq1  ATTCTTTAGTGCTCTACTTGACCCCATTTCAACTGGGCCATAAGTTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTAGTGCTCTACTTGACCCCATTTCAACTGGGCCATAAGTTTTGG  550

seq1  GGGGAAAAAACACCCTCTCAAGTCCAAAATTTTAAATAATGCTTATGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAAAACACCCTCTCAAGTCCAAAATTTTAAATAATGCTTATGAGT  600

seq1  TGGTTTAGAACACGGGCTGCTCATATTACCCCAATGGTGGGAAAGACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAGAACACGGGCTGCTCATATTACCCCAATGGTGGGAAAGACTTT  650

seq1  GATCACTGGGACTGATCTCGGGACACGGTCGGGGAAAGGACAATGACGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTGGGACTGATCTCGGGACACGGTCGGGGAAAGGACAATGACGGT  700

seq1  TCCAATTAAAATGTTTTCAGGAGTCTCTGCATAACAACAGGAACTTGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTAAAATGTTTTCAGGAGTCTCTGCATAACAACAGGAACTTGCCT  750

seq1  ATAATTACAGATGAAATAATAATTAAAAAGAGCCCTTGTAATCCTGTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTACAGATGAAATAATAATTAAAAAGAGCCCTTGTAATCCTGTGTG  800

seq1  TAGTAGCTCACGGTTGGTGTCTGGGTACCAAGACAAATACCTCCCTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGCTCACGGTTGGTGTCTGGGTACCAAGACAAATACCTCCCTAGAA  850

seq1  TTGGGAGCCACAGGAACAATTAAAGAATAAATCCTGGTCTCTCATTAACA  900
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGCCACAGGAACAATTAAAGAATAAATCCTGGTCTCTCATTAACA  900

seq1  CCCGACTCTATTAGCTGACTCGCTCTTCGGTCACATTAAAGCCTCATGGA  950
      ||||||||||||| |||||||||| ||| ||||||||||   ||||||||
seq2  CCCGACTCTATTAACTGACTCGCTTTTC-GTCACATTAA--GCTCATGGA  947

seq1  GTTTGCTGGTGGCTGGGGAGGAAAACAGTTTGGACCCCACAGAAATGAAC  1000
      | ||||||||||||||||| |||||||| ||||| ||||||| |||| ||
seq2  G-TTGCTGGTGGCTGGGGA-GAAAACAG-TTGGA-CCCACAG-AATGGAC  992

seq1  ATGCAATTCCAGTCAGTAAATCTCTTCTGTAATTGGCTAATAAGTGT-AC  1049
      |||||||| |||||||| |||||| ||| ||||| |||||| ||||| ||
seq2  ATGCAATT-CAGTCAGT-AATCTC-TCT-TAATT-GCTAAT-AGTGTAAC  1036

seq1  TGCTTGGCAAATAGCTGCTGGAAACGGCAGATTGAATATTTTCCCCATTT  1099
      ||| ||||  ||||||||||| |||||| || |||| ||||| |||||||
seq2  TGC-TGGC--ATAGCTGCTGG-AACGGC-GAATGAA-ATTTT-CCCATTT  1079

seq1  TTCTCTCTTGCTTCTCAAAAGTATTTAAGCTTGGGGGTGGATCTCTTGAG  1149
      |     ||||| |||| ||  |     |||||  ||| |||| |||    
seq2  T----CCTTGC-TCTCTAAGAT-----AGCTT--GGGAGGAT-TCT----  1112

seq1  CTTGAGACT  1158
      |||||||||
seq2  CTTGAGACT  1121

seq1: chr8_118075276_118076297
seq2: B6Ng01-143B13.g_70_1091 (reverse)

seq1  AACAGATTCCAGCCAAGC-AATGACTTGTTAATGATCTGTGCTGGGTAAT  49
      |||| |||||||||| || |||||||   |||||||||||||||||||||
seq2  AACA-ATTCCAGCCAGGCAAATGACT--GTAATGATCTGTGCTGGGTAAT  47

seq1  GAGCTGTAGCAGCCCAGATCCGCTGCTTATCTGATGGGCTGGATCTCTGC  99
       |||||||||||||||||| |||||| ||||||||||||||||||| |||
seq2  TAGCTGTAGCAGCCCAGAT-CGCTGC-TATCTGATGGGCTGGATCTTTGC  95

seq1  TGGGTT-CCAGTGGAGACTAGAGC-AGCAGTGAATGAAGCGAAGGGCTTT  147
      |||||| ||||||||||||||||| |||||||||||||||||||||||||
seq2  TGGGTTCCCAGTGGAGACTAGAGCAAGCAGTGAATGAAGCGAAGGGCTTT  145

seq1  GGAGATTCCGCCCTCTGGGGCTGAGGACCTGTTTGGTAG-AAGGGCTTGC  196
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  GGAGATTCCGCCCTCTGGGGCTGAAGACCTGTTTGGTAGAAAGGGCTTGC  195

seq1  TTGGCATGCAGCGAGGAACTATCCCCAGGGTTGTATAAACCAGGCATCAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATGCAGCGAGGAACTATCCCCAGGGTTGTATAAACCAGGCATCAT  245

seq1  GGGGCATGCCTACAGTTCCATCACCACTCAGGAAGTAAAGGTCAGAGGAC  296
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGGGCATGCCTACAGTTCCATCA-CACTCAGGAAGTAAAGGTCAGAGGAC  294

seq1  CCAAAGTTCAAGGTCGTCGATGGTTACATAGGGAGCTATAGACAAGCTCG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTCAAGGTCGTCGATGGTTACATAGGGAGCTATAGACAAGCTCG  344

seq1  -AAGTACATGAGAGTCTATCTCATAACTAAGTAAAC-AAATAAATAATAT  394
       ||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAGTACATGAGAGTCTATCTCATAACTAAGTAAACAAAATAAATAATAT  394

seq1  GAAACATGGAGTTAAATTAAAAAATAAGGAAGGTAGCTCTATGTTTGACC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATGGAGTTAAATTAAAAAATAAGGAAGGTAGCTCTATGTTTGACC  444

seq1  AGCAATGCCTTGACCTCTGAGCCTGTTTCAGTGAGGATGCACTCACACAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGCCTTGACCTCTGAGCCTGTTTCAGTGAGGATGCACTCACACAG  494

seq1  GAATCCAGAACATTCATAGCTACAGATGCACACACATGCACAGTGGCAAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAGAACATTCATAGCTACAGATGCACACACATGCACAGTGGCAAG  544

seq1  CCACCCCACGTGTGCACACATGAGCACACATTTAAGCTTGTCTGTACTGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCACGTGTGCACACATGAGCACACATTTAAGCTTGTCTGTACTGC  594

seq1  ATGCACGTATACCCACATGTATGCACAAGTACATACACACACACATACAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACGTATACCCACATGTATGCACAAGTACATACACACACACATACAC  644

seq1  ACAGATTCCTACATGGTCATGGACTTAAAGTTGATGCTTTCTCCATTTCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTCCTACATGGTCATGGACTTAAAGTTGATGCTTTCTCCATTTCA  694

seq1  AGGCCAATGCCGTGACACTTAAGAAAGCAGTCCCTTCTACTTCACCAACA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAATGCCGTGACACTTAAGAAAGCAGTCCCTTCTACTTCACCAACA  744

seq1  CTTCCCAGAAAAGAGTCAGACACTAATCTTCTTGCCCCTTGCAATGCACC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGAAAAGAGTCAGACACTAATCTTCTTGCCCCTTGCAATGCACC  794

seq1  CAGTAGGTGTGCACCCACTAGGTGTGCATGGGAGCATGAATATCAACCTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGGTGTGCACCCACTAGGTGTGCATGGGAGCATGAATATCAACCTC  844

seq1  CCAGTGCTGCTTTGCTGTGACTCCCGGGGGCCTGGGGAACCAATGACACA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCTGCTTTGCTGTGACTCCCGGGGGCCTGGGGAACCAATGACACA  894

seq1  AGATAACTCTCTCTCTCATCCTCTTTTCACTTGTAATTTGTTTATTTCTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACTCTCTCTCTCATCCTCTTTTCACTTGTAATTTGTTTATTTCTC  944

seq1  ACACAGAAGGATTCTTTTCCATCTCTGTCACTACACTCAGCTGTCACTCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAGGATTCTTTTCCATCTCTGTCACTACACTCAGCTGTCACTCA  994

seq1  CTTCTCTGGATTTCCCTAGGTGGAATTC  1022
      ||||||||||||||||||||||||||||
seq2  CTTCTCTGGATTTCCCTAGGTGGAATTC  1022