BAC Information

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BAC

Clone NameB6Ng01-144H15
Chromosome8 (Build37)
Map Location 130,347,132 - 130,510,364
singlet/doubletdoublet
Overlap genenone
Upstream geneTomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
Downstream geneNrp1, LOC668494, Itgb1, LOC100042659, LOC100042667, Ccdc7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144H15.bB6Ng01-144H15.g
ACCDH942145DH942146
length867350
definitionDH942145|Mus musculus domesticus DNA, BAC clone: B6Ng01-144H15, 5' end.DH942146|Mus musculus domesticus DNA, BAC clone: B6Ng01-144H15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,347,132 - 130,347,997)(130,510,015 - 130,510,364)
sequence
gaattccaaagtcagggaaatttaggaactgaagtctcacctgaagcggc
aagaccagctccctcagcatggtgactatcccctattgcttacagaggtg
gaaagagacaggatacagacccgagcttgtgttagaatctgagttgcatg
tcctgtgaaggctagtccaggtagatgggagcttggcttctcccaccaac
aagctccagataagaaggtcagataggtctctgttactcttctctatctc
ccacacaggtcaattctggtatctattcaaggtcaccactgtactttttc
tatagctttgggtcatagaactttctagtttgggcaccagcttcccttct
gtgctcattttgtaaaaacattcgatgttctaagaagccattgtatgttc
ttatctcctctggtttcactctctgcagagtctttcctctgaggagtatg
aaggtacataccacagggaagacacctaatctgaaatgctgcaaggctgg
cttgggaagttgttgtgaatcaagttacaagaaacctaatagagaaagct
gaccagagggtcttgcaggcaatgctgagttattctgtgaaagagtcctg
aaaggagaggtcaaggcacagccagggggctactagaggagaggcaaaca
gagacttaggggaaagtcactgaaaggttcaagatgagtaaaagaaaata
gaatttttcattgttcagctactcagaggcaggcaagataatgcccaagt
tctgaatattttatcaatgccgctttccttgaactttgtgtgtgtatgtg
tgcgtgttcatgtatatgtgtgtgtgcgtatttcatgtatatgtttgtgt
gtgtgtgtgtgtgtggg
tattcatggttcattagggctttgaacatcatatggcatttccatatacc
caacctatcaagcatagccctctttaaaattttctacacgtctttagatg
tgcctcccaaaccaagctattgaacgcaaaaagagaaagacatgtacggg
tggaacactacaaatatacaactcttgtgtgtgttttcaccctaggagag
agactttaacaaaaatgtgtttttatattttaagattgaagtcatttgga
aacctgccaatcacacgtcaatcagatgagccttgcagaaaatgttccca
aattcttggacactgcttccttcaggaagggagttggggcgggggggggg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130347132_130347997
seq2: B6Ng01-144H15.b_47_913

seq1  GAATTCCAAAGTCAGGGAAATTTAGGAACTGAAGTCTCACCTGAAGCGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGTCAGGGAAATTTAGGAACTGAAGTCTCACCTGAAGCGGC  50

seq1  AAGACCAGCTCCCTCAGCATGGTGACTATCCCCTATTGCTTACAGAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGCTCCCTCAGCATGGTGACTATCCCCTATTGCTTACAGAGGTG  100

seq1  GAAAGAGACAGGATACAGACCCGAGCTTGTGTTAGAATCTGAGTTGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGACAGGATACAGACCCGAGCTTGTGTTAGAATCTGAGTTGCATG  150

seq1  TCCTGTGAAGGCTAGTCCAGGTAGATGGGAGCTTGGCTTCTCCCACCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGAAGGCTAGTCCAGGTAGATGGGAGCTTGGCTTCTCCCACCAAC  200

seq1  AAGCTCCAGATAAGAAGGTCAGATAGGTCTCTGTTACTCTTCTCTATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCAGATAAGAAGGTCAGATAGGTCTCTGTTACTCTTCTCTATCTC  250

seq1  CCACACAGGTCAATTCTGGTATCTATTCAAGGTCACCACTGTACTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGGTCAATTCTGGTATCTATTCAAGGTCACCACTGTACTTTTTC  300

seq1  TATAGCTTTGGGTCATAGAACTTTCTAGTTTGGGCACCAGCTTCCCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTTTGGGTCATAGAACTTTCTAGTTTGGGCACCAGCTTCCCTTCT  350

seq1  GTGCTCATTTTGTAAAAACATTCGATGTTCTAAGAAGCCATTGTATGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCATTTTGTAAAAACATTCGATGTTCTAAGAAGCCATTGTATGTTC  400

seq1  TTATCTCCTCTGGTTTCACTCTCTGCAGAGTCTTTCCTCTGAGGAGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCCTCTGGTTTCACTCTCTGCAGAGTCTTTCCTCTGAGGAGTATG  450

seq1  AAGGTACATACCACAGGGAAGACACCTAATCTGAAATGCTGCAAGGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTACATACCACAGGGAAGACACCTAATCTGAAATGCTGCAAGGCTGG  500

seq1  CTTGGGAAGTTGTTGTGAATCAAGTTACAAGAAACCTAATAGAGAAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAAGTTGTTGTGAATCAAGTTACAAGAAACCTAATAGAGAAAGCT  550

seq1  GACCAGAGGGTCTTGCAGGCAATGCTGAGTTATTCTGTGAAAGAGTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGAGGGTCTTGCAGGCAATGCTGAGTTATTCTGTGAAAGAGTCCTG  600

seq1  AAAGGAGAGGTCAAGGCACAGCCAGGGGGCTACTAGAGGAGAGGCAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGAGGTCAAGGCACAGCCAGGGGGCTACTAGAGGAGAGGCAAACA  650

seq1  GAGACTTAGGGGAAAGTCACTGAAAGGTTCAAGATGAGTAAAAGAAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTAGGGGAAAGTCACTGAAAGGTTCAAGATGAGTAAAAGAAAATA  700

seq1  GAATTTTTCATTGTTCAGCTACTCAGAGGCAGGCAAGATAATGCCCAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTCATTGTTCAGCTACTCAGAGGCAGGCAAGATAATGCCCAAGT  750

seq1  TCTGAATATTTTATCAATGCCGCTTTCCTTGAACTTTGTGTGTGTATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATATTTTATCAATGCCGCTTTCCTTGAACTTTGTGTGTGTATGTG  800

seq1  TGCGTGTTCATGTATATGTGTGTGTGCGTA-TTCATGTATATGTTTGTGT  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGCGTGTTCATGTATATGTGTGTGTGCGTATTTCATGTATATGTTTGTGT  850

seq1  GTGTGTGTGTGTGTGTG  866
      ||||||||||||||| |
seq2  GTGTGTGTGTGTGTGGG  867

seq1: chr8_130510015_130510364
seq2: B6Ng01-144H15.g_73_422 (reverse)

seq1  CCCCCCCCCCGCCCCAACTCCCTTCCTGAAGGAAGCAGTGTCCAAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCGCCCCAACTCCCTTCCTGAAGGAAGCAGTGTCCAAGAATT  50

seq1  TGGGAACATTTTCTGCAAGGCTCATCTGATTGACGTGTGATTGGCAGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACATTTTCTGCAAGGCTCATCTGATTGACGTGTGATTGGCAGGTT  100

seq1  TCCAAATGACTTCAATCTTAAAATATAAAAACACATTTTTGTTAAAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATGACTTCAATCTTAAAATATAAAAACACATTTTTGTTAAAGTCT  150

seq1  CTCTCCTAGGGTGAAAACACACACAAGAGTTGTATATTTGTAGTGTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTAGGGTGAAAACACACACAAGAGTTGTATATTTGTAGTGTTCCA  200

seq1  CCCGTACATGTCTTTCTCTTTTTGCGTTCAATAGCTTGGTTTGGGAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTACATGTCTTTCTCTTTTTGCGTTCAATAGCTTGGTTTGGGAGGCA  250

seq1  CATCTAAAGACGTGTAGAAAATTTTAAAGAGGGCTATGCTTGATAGGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAAGACGTGTAGAAAATTTTAAAGAGGGCTATGCTTGATAGGTTG  300

seq1  GGTATATGGAAATGCCATATGATGTTCAAAGCCCTAATGAACCATGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATGGAAATGCCATATGATGTTCAAAGCCCTAATGAACCATGAATA  350