MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-144P11
Chromosome	8 (Build37)
Map Location	55,866,841 - 55,867,967
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Vegfc, Spcs3, Asb5, Spata4, Wdr17
Downstream gene	Gpm6a, LOC667624, LOC100040156, LOC100040382, LOC100040392, EG546212
Link	Open Mouse BAC browser

Click to get alignment info.

name	Vegfc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22341 MGI:109124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spcs3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76687 MGI:1923937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76294 MGI:1923544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spata4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69281 MGI:1916531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244484 MGI:1924662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpm6a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234267 MGI:107671
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667624 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100040156 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040382 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	LOC100040392 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	EG546212 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546212 MGI:3644093
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Vegfc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119672918 GeneID:22341 MGI:109124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vascular endothelial growth factor C transcript_id : NM_009506.2

name	Spcs3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988402 GeneID:76687 MGI:1923937
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal peptidase complex subunit 3 homolog (S. cerevisiae) transcript_id : NM_029701.1

name	Asb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365352 GeneID:76294 MGI:1923544
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCs box-containing protein 5 transcript_id : NM_029569.2

name	Spata4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353599 GeneID:69281 MGI:1916531
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated 4 transcript_id : NM_133711.3

name	Wdr17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23957687 GeneID:244484 MGI:1924662
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 17 transcript_id : NM_028220.2

name	Gpm6a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981997 GeneID:234267 MGI:107671
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein m6a transcript_id : NM_153581.2

name	LOC100040382 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258755 GeneID:100040382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : similar to transcription elongation factor B polypeptide 3C transcript_id : XM_001474423.1

name	LOC100040392 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258757 GeneID:100040392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : similar to elongin A transcript_id : XM_001474438.1

name	EG546212 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258759 GeneID:546212 MGI:3644093
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : predicted gene, EG546212 transcript_id : XM_620863.4

name	Vegfc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678565 CCDS:CCDS22306.1 GeneID:22341 MGI:109124
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0016331 - morphogenesis of embryonic epithelium [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] [Evidence ISS]; GO:0002052 - positive regulation of neuroblast proliferation [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : vascular endothelial growth factor C protein_id : NP_033532.1

name	Spcs3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125988403 GeneID:76687 MGI:1923937
definition	GO_component : GO:0005787 - signal peptidase complex [Evidence IEA] GO_function : GO:0009003 - signal peptidase activity [Evidence IEA] GO_process : GO:0006465 - signal peptide processing [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : signal peptidase complex subunit 3 protein_id : NP_083977.1

name	Asb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18252776 CCDS:CCDS22307.1 GeneID:76294 MGI:1923544
definition	codon_start : 1 product : ankyrin repeat and SOCs box-containing protein 5 protein_id : NP_083845.1

name	Spata4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33186914 CCDS:CCDS22308.1 GeneID:69281 MGI:1916531
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0007283 - spermatogenesis [Evidence ISS] codon_start : 1 product : spermatogenesis related gene 2 protein_id : NP_598472.2

name	Wdr17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23957688 CCDS:CCDS22309.1 GeneID:244484 MGI:1924662
definition	codon_start : 1 product : WD repeat domain 17 protein_id : NP_082496.2

name	Gpm6a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23957686 CCDS:CCDS22310.1 GeneID:234267 MGI:107671
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : glycoprotein m6a protein_id : NP_705809.1

name	LOC100040382 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258756 GeneID:100040382
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474473.1

name	LOC100040392 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258758 GeneID:100040392
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474488.1

name	EG546212 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258760 GeneID:546212 MGI:3644093
definition	codon_start : 1 product : hypothetical protein protein_id : XP_620863.4

name	LOC667624 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667624
definition	number : 5 pseudo : _no_value

name	LOC667624 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667624
definition	number : 4 pseudo : _no_value

name	LOC667624 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667624
definition	number : 3 pseudo : _no_value

name	LOC667624 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667624
definition	number : 2 pseudo : _no_value

name	LOC667624 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667624
definition	number : 1 pseudo : _no_value

name	LOC100040156 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040156
definition	number : 1 pseudo : _no_value

clone name	MSMg01-275F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O22
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-144P11.b	B6Ng01-144P11.g
ACC	DH942504	DH942505
length	1,156	1,111
definition	DH942504\|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P11, 5' end.	DH942505\|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccgaaaggcagagaaacacctgaaaaaaat gttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga ttccatctcacaccagtcagaatggctaaggtcaaaaattcaggtgacag cagatgctggcgaggatgtggagaaagaggaacactcctccatttttggt gggattgcaagcttgtacaaccactctgcaaatcagtctggcggttcctc agaaaattggacatagtactaccagaggatccagcaatacctctcctggg catatatccagaaaatgtcccaaccggtaagaaggacacatgctccacta tgttcatagcagccttatttataaaagccagaagctggaaagaacccaga tgtccctcaacagaggaatggatacaaaaaatgtagtacatttacacaat ggagtactactcagctattaaaaagaatgaattcacgaaattcctaatgg ttggacctggagggcatctttctgagtgaggtaacccaatcacaaaagaa ctcaaatgaaatgtactcactgagaagtgaatagtaacccagaaacttag tatagcgagatataaggtacaatatgtaaaacatatgaaactgaataaaa tgaagaccaaagtgtggacactttgctcattcttagaattggaaacaatc acccatggaaggagttacagagacaaagtttggagctgagacaaaaggtt ggcccatctagagactgccatatccagggatccatcccataattagcctc caagcgatgacaccattgcatacactagcaagcctttgttgcaaggacgg tgatatagctgtcccttatgagactaggccggggcctagcaaacacagaa gtggatgctcacagtcaactatttgatggatcacagggccccaatggagg agctagagaaagtatccaagagctaagagatctgcaccctatcggagaca cattatgaactacagtacccagagctctgactctagatgcatatgtatct aagatgactagtcgccatcactgaagagaggccatgtcagcaacgttatg cctcagttacaagggattccaggcccaaaatgggaatggggtggggttag gggagt	gaattcactttgtagaccagactggccttgaactcagaaatctgcctgcc tctgcctcctgagtgctgggattagaggtgtgtgccaccacgcctggcgg gaactcttatacacatgcactcacacatatttaagtaaagcagtgactaa cacacttaggggaaaaaaatttaaatattttgtcctatctctttcctgga ctctgaaattccacagttggagaaacaggaatggtagttaatgttaacct tgaagctaaaatatttatatgctcggaaaatacttggcccctgcattttt caatgtagattattttctctaacatttttttttcagaaaagtttaaggca aaatggaagtgttggtagccaaaccaaggaagaagacctcttatctgaat ttccctagtttgtacagaacttattttgttttgtgagaattggccacatg cgtcatagatgtgatgactataaattattcagatgattggattgacaatt atgctcacccttccacagaggtagagtaagaagttctcttacaatcagtg agtactatgctcatcctcacagtcccatttcctttcattactttttttcc tgttttctttggttttataagagacaaggtttatttgtgtagccctggtg tcctgaaactcactccatagtccaggccagcctccaattcagagatctgc ctgcttctgcctcctgagtgctgggattaaaagtatgtgccacaacctcc tggttaaattttcaattcccacaccagaaaaagaaagttacagcctgctc ggacagtgcaacattttcctgtactgttttctctgttatcccaggaccct aaactccatttctgagtcactcattattacttaccacctgcaaataaaag gcattagaagtgaaattctgtttttacaagtgaaaaggagaggaaaatgt acgtcatataaagtagtttcttttttctatcctgtttctggtgcaaactt ttcctgcctctctcgtggctctttctaactttctgtggatcttccctcct aatttcatctgatctgctgtagatctcacctctctcttgctgaataccgt gatggacttca
quality values	Open. Hide. 45 43 38 43 52 61 61 36 35 61 61 61 61 61 61 61 47 43 61 61 61 61 61 61 49 39 52 55 35 25 20 36 19 34 49 59 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 52 53 47 53 57 53 57 57 50 53 57 57 53 57 53 57 57 57 53 57 53 57 57 57 53 57 57 57 57 57 57 57 57 53 39 57 57 57 57 53 57 57 57 53 45 57 57 53 53 57 57 57 53 57 57 50 57 53 53 47 47 52 50 57 57 57 52 57 53 53 50 57 53 50 53 57 57 57 57 57 52 45 42 53 53 53 41 46 27 57 53 57 57 53 53 57 53 52 53 57 57 57 52 42 53 52 53 57 57 41 43 36 53 57 57 45 52 53 57 57 47 41 57 53 43 37 52 24 37 38 57 57 50 53 57 38 57 47 47 37 39 52 53 57 53 50 53 53 40 38 53 53 44 44 53 33 42 53 30 30 53 46 57 40 57 29 41 25 44 53 40 36 41 38 38 35 52 57 46 40 53 37 53 44 36 53 52 31 38 28 37 53 35 33 35 12 43 53 31 34 57 40 53 33 44 27 40 47 40 44 24 37 29 27 57 57 41 33 53 20 46 35 25 15 45 44 26 37 34 40 34 41 43 36 33 30 36 40 23 27 24 41 34 48 30 30 25 29 47 51 18 23 24 40 26 40 22 39 32 27 41 30 31 35 38 32 29 39 36 32 30 30 25 32 30 29 21 29 26 29 29 24 24 29 45 21 30 36 29 28 25 32 21 30 27 29 33 28 21 35 28 33 29 33 28 16 51 36 29 29 36 29 21 24 27 29 36 21 15 17 25 17 35 31 19 22 29 28 24 24 38 34 24 17 36 24 25 27 29 25 28 36 13 30 23 28 17 23 24 16 23 20 39 39 25 10 26 33 33 20 18 23 46 29 22 14 29 19 25 33 38 23 30 26 18 18 21 29 28 28 29 13 29 20 27 34 36 25 23 26 34 28 23 51 36 26 23 22 25 28 13 27 23 23 26 17 14 51 19 8 28 28 20 17 22 31 28 24 32 25 8 28 14 26 14 8 12 11 12 11 38 29 20 24 23 33 21 22 9 5 7 7 15 31 20 24 19 5 10 14 20 17 28 30 27 9 20 7 33 20 30 23 34 9 13 5 10 20 13 9 12 4 13 27 5 14 29 31 28 20 19 14 25 18 9 22 11 16 35 30 33 12 14 33 13 14 13 5 13 15 10 14 17 12 8 18 8 12 16 29 22 11 14 9 20 25 7 8 10 9 5 17 6 12 11 14 16 17 30 13 22 8 10 6 29 5 20 12 29 10 8 11 14 3 4 3 7 5 3 3 6 13 4 10 9 18 13 4 6 4 20 8 14 8 12 5 24 5 4 5 8 3 13 7 17 10 11 7 11 10 10 7 5 7 30 11 7 4 3 3 6 8 14 12 6 12 4 17 27 30 27 5 9 25 16 12 13 5 6 14 20 4 3 7 18 14 7 3 3 5 12 22 24 8 18 6 4	Open. Hide. 61 61 55 49 61 22 21 36 33 36 36 32 30 23 59 61 61 49 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 59 61 61 61 59 61 55 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 53 57 57 57 53 43 57 57 53 53 53 57 57 57 53 57 57 57 57 53 53 53 57 57 57 57 53 53 38 53 57 53 53 47 57 53 57 53 57 53 50 57 53 52 57 57 53 53 57 53 53 53 57 57 53 53 38 57 57 57 47 53 57 57 57 53 57 53 53 57 53 57 57 57 57 53 50 57 53 47 53 53 50 53 53 57 53 57 57 47 50 57 57 52 53 57 53 57 53 53 45 53 46 46 53 57 57 57 57 57 57 53 57 53 53 57 37 57 57 57 53 53 57 53 57 52 28 57 57 52 53 50 52 57 50 57 53 53 50 38 37 53 57 37 57 50 37 46 57 57 57 47 34 38 52 39 53 57 53 52 50 57 39 57 37 46 31 38 34 21 29 24 29 53 41 40 53 53 53 38 28 39 52 40 31 34 34 30 31 38 39 39 36 36 45 46 37 52 44 32 52 37 53 37 37 37 53 36 37 33 40 33 32 30 53 40 53 36 40 41 33 37 33 30 37 37 34 40 37 35 36 24 25 40 29 32 29 57 31 30 23 32 28 57 57 44 28 24 29 29 47 32 33 18 37 29 36 32 32 32 31 30 27 32 29 45 31 30 29 21 51 25 24 51 46 30 29 25 30 30 31 24 47 37 30 38 29 46 30 29 29 51 51 51 51 36 25 46 51 37 31 29 29 24 30 29 29 29 29 28 44 28 30 29 15 31 30 19 23 28 29 41 29 27 27 29 29 46 51 51 33 28 43 29 40 23 24 32 23 36 24 51 46 28 29 29 29 29 35 20 28 28 29 33 46 30 22 23 25 30 20 51 31 10 12 51 41 27 29 29 29 23 32 51 25 19 21 23 25 8 26 26 23 28 35 31 28 38 15 46 10 7 30 14 25 34 28 29 28 21 17 24 19 29 18 25 51 39 29 28 51 41 17 14 22 16 17 28 25 26 6 21 38 21 23 34 25 51 14 32 12 23 9 29 34 51 51 51 30 23 14 5 15 23 27 27 29 51 51 23 15 8 32 10 36 13 18 32 51 42 27 24 30 11 36 19 22 15 9 33 15 18 4 10 35 19 21 13 30 19 33 44 19 14 6 5 7 4 4 6 18 11 12 12 14 21 19 30 10 31 14 9 10 14 9 9 9 27 16 39 18 15 29 33 35 32 16 25 26 8 15 29 12 9 8 10 10 20 4 3 4 16 8 5 6 8 26 6 7 7 23 18 13 22 34 5 29 8 25 7 11 22 17 8 9 4 8 6 5 8 6 10 8 5 29 22 11 33 11 13 5 5 16 5 4 3 4 5 7 17 4 8 23 6 25 11 24 21 9 11 5 4 8 4 5 6 4 5 5 10 14 9 18 5 4 4 23 25 10 9 12 3 3 2 6 22 24 10 8 7 5 9 15 6 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_55866841_55867967
seq2: B6Ng01-144P11.g_67_1177 (reverse)

seq1  TGAAGTCAATCAACTGGTATTCAGCAAGAGAGA-GTGAGAATCTACAGCC  49
      ||||||| ||||   |||||||||||||||||| ||||| ||||||||| 
seq2  TGAAGTCCATCA--CGGTATTCAGCAAGAGAGAGGTGAG-ATCTACAGC-  46

seq1  AAGACTCAGGATGGAAATTAGGAGAGAGGATCCACAGGAAAGTTAG-AAG  98
       ||| ||| ||| ||||||||||| || |||||||| ||||||||| |||
seq2  -AGA-TCA-GAT-GAAATTAGGAGGGAAGATCCACA-GAAAGTTAGAAAG  91

seq1  AGCCAACGAGAGAGGCAAGGAAAAAGTTTGCA-CAGAAACAGGATAG-AG  146
      |||| ||||||||||||  | ||||||||||| |||||||||||||| | 
seq2  AGCC-ACGAGAGAGGCA--GGAAAAGTTTGCACCAGAAACAGGATAGAAA  138

seq1  ATAGAAACTACTTTATTATTGACGTTACATTTTTCCTCTTCCTTTTCACT  196
      | ||||||||||||||   ||||| |||| |||||||| |||||||||||
seq2  AAAGAAACTACTTTAT--ATGACG-TACA-TTTTCCTC-TCCTTTTCACT  183

seq1  TGTAAAAAACAGAATTTCACTTCTTAATGCCTTTTATTTGCAGGTGGTAA  246
      ||| ||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGT-AAAAACAGAATTTCACTTC-TAATGCCTTTTATTTGCAGGTGGTAA  231

seq1  GTTATTAATGAGTGACTCAGAAATGGAGTTTAGGGTCCTGGGATAACAGA  296
      | || |||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TAATAATGAGTGACTCAGAAATGGAGTTTAGGGTCCTGGGATAACAGA  280

seq1  GAAAACAGTACAGGAAAATGTTGCACTGTCCGAGCAGGCTGTAACTTTCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGTACAGGAAAATGTTGCACTGTCCGAGCAGGCTGTAACTTTCT  330

seq1  TTTTCTGGTGTGGGAATTGAAAATTTAACCAGGAGGTTGTGGCACATACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGTGTGGGAATTGAAAATTTAACCAGGAGGTTGTGGCACATACT  380

seq1  TTTAATCCCAGCACTCAGGAGGCAGAAGCAGGCAGATCTCTGAATTGGAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCAGCACTCAGGAGGCAGAAGCAGGCAGATCTCTGAATTGGAG  430

seq1  GCTGGCCTGGACTATGGAGTGAGTTTCAGGACACCAGGGCTACACAAATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTGGACTATGGAGTGAGTTTCAGGACACCAGGGCTACACAAATA  480

seq1  AACCTTGTCTCTTATAAAACCAAAGAAAACAGGAAAAAAAGTAATGAAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGTCTCTTATAAAACCAAAGAAAACAGGAAAAAAAGTAATGAAAG  530

seq1  GAAATGGGACTGTGAGGATGAGCATAGTACTCACTGATTGTAAGAGAACT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGGACTGTGAGGATGAGCATAGTACTCACTGATTGTAAGAGAACT  580

seq1  TCTTACTCTACCTCTGTGGAAGGGTGAGCATAATTGTCAATCCAATCATC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTCTACCTCTGTGGAAGGGTGAGCATAATTGTCAATCCAATCATC  630

seq1  TGAATAATTTATAGTCATCACATCTATGACGCATGTGGCCAATTCTCACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATTTATAGTCATCACATCTATGACGCATGTGGCCAATTCTCACA  680

seq1  AAACAAAATAAGTTCTGTACAAACTAGGGAAATTCAGATAAGAGGTCTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATAAGTTCTGTACAAACTAGGGAAATTCAGATAAGAGGTCTTC  730

seq1  TTCCTTGGTTTGGCTACCAACACTTCCATTTTGCCTTAAACTTTTCTGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGGTTTGGCTACCAACACTTCCATTTTGCCTTAAACTTTTCTGAA  780

seq1  AAAAAAATGTTAGAGAAAATAATCTACATTGAAAAATGCAGGGGCCAAGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATGTTAGAGAAAATAATCTACATTGAAAAATGCAGGGGCCAAGT  830

seq1  ATTTTCCGAGCATATAAATATTTTAGCTTCAAGGTTAACATTAACTACCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCGAGCATATAAATATTTTAGCTTCAAGGTTAACATTAACTACCA  880

seq1  TTCCTGTTTCTCCAACTGTGGAATTTCAGAGTCCAGGAAAGAGATAGGAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTTCTCCAACTGTGGAATTTCAGAGTCCAGGAAAGAGATAGGAC  930

seq1  AAAATATTTAAATTTTTTTCCCCTAAGTGTGTTAGTCACTGCTTTACTTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTAAATTTTTTTCCCCTAAGTGTGTTAGTCACTGCTTTACTTA  980

seq1  AATATGTGTGAGTGCATGTGTATAAGAGTTCCCGCCAGGCGTGGTGGCAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGTGAGTGCATGTGTATAAGAGTTCCCGCCAGGCGTGGTGGCAC  1030

seq1  ACACCTCTAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCTAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGT  1080

seq1  TCAAGGCCAGTCTGGTCTACAAAGTGAATTC  1127
      |||||||||||||||||||||||||||||||
seq2  TCAAGGCCAGTCTGGTCTACAAAGTGAATTC  1111

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information