BAC Information

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BAC

Clone NameB6Ng01-146L10
Chromosome8 (Build37)
Map Location 119,875,621 - 120,043,049
singlet/doubletdoublet
Overlap gene4933407C03Rik, Plcg2
Upstream geneLOC384868, LOC668233, Dynlrb2, Cdyl2, LOC100043053, 2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan
Downstream gene4632417N05Rik, Hsd17b2, Mphosph6, Cdh13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146L10.bB6Ng01-146L10.g
ACCDH943781DH943782
length1061,041
definitionDH943781|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L10, 5' end.DH943782|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,042,944 - 120,043,049)(119,875,621 - 119,876,665)
sequence
gaattccgtggcatgggaaccaaatctcagtgaggcaatgaaaatgagga
aaaggagagaacaggaagttggggggggaggtctggagggagtaagaggg
gtaatg
gaattccagccatgagataccctgcaggctcaggccaccggaatggttaa
ataagggcctgctctgtaggcagtagatggctcaggcaccaggttggagg
aaaagtggtccggtctaccttggctcatggaaggctgggctgtctcttgg
cagatgggtttatagcatctgttcatgggttctgtgcacgcctagtctcc
agttgagtgcgctcacggtcatgactttaaaagcaaccaacaacgattga
cttaagtaagtgatttaagttcatctcacttgtggagaatcgatctccca
ggtgtatcatcatctgcccagggtcccacagcttccgggtgatgtaacca
ctctgattccatctgggagactgcgctacagtctcttttggacacatatt
ggatgtttgctagaaccttctatggatgagttaaatgcatctagtgatgg
ggaggagccatgaagccaggctggaaatgtaaaatctaggaggaggcggt
ttgtgttgtgggttcccctggcgagagggccttccagccttgtggctcta
tggcagggttgtggtttggagatgaaaagtccctacaggcacatagtttg
aatacttgttttctggctggtggcgctatttttgagaggctgtgggaccc
ttatggtatgaggcctcaccagtgagagttggtcatagggacaggccttt
gaagtggatggctcaccactggtcgtggcctctttctctccttcctggtc
tacaagattctcaaatcttccacccccatccccactcccacgcacagtct
ctgccatgtctcggctaccacgatgggccacgtcttttgtagcttcaggc
tcaaagtctttccgtccgatatttctagcaggtactccatgtccatggag
cacctctgggctgcccacctccatgccgaagtgagctctctgtcctgccg
agctccccctgcacctcagccacttaagtcttccaagtcagtttcacaac
ttcctggtggatagcaatgatacactggcagccaggaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_120042944_120043049
seq2: B6Ng01-146L10.b_44_149 (reverse)

seq1  CATTACCCCTCTTACTCCCTCCAGACCTCCCCCCCCAACTTCCTGTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCCCTCTTACTCCCTCCAGACCTCCCCCCCCAACTTCCTGTTCTC  50

seq1  TCCTTTTCCTCATTTTCATTGCCTCACTGAGATTTGGTTCCCATGCCACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCCTCATTTTCATTGCCTCACTGAGATTTGGTTCCCATGCCACG  100

seq1  GAATTC  106
      ||||||
seq2  GAATTC  106

seq1: chr8_119875621_119876665
seq2: B6Ng01-146L10.g_68_1108

seq1  GAATTCCAGCCATGAGATACCCTGCAGGCTCAGGCCACCGGAATGGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCATGAGATACCCTGCAGGCTCAGGCCACCGGAATGGTTAA  50

seq1  ATAAGGGCCTGCTCTGTAGGCAGTAGATGGCTCAGGCACCAGGTTGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGCCTGCTCTGTAGGCAGTAGATGGCTCAGGCACCAGGTTGGAGG  100

seq1  AAAAGTGGTCCGGTCTACCTTGGCTCATGGAAGGCTGGGCTGTCTCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGGTCCGGTCTACCTTGGCTCATGGAAGGCTGGGCTGTCTCTTGG  150

seq1  CAGATGGGTTTATAGCATCTGTTCATGGGTTCTGTGCACGCCTAGTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGGTTTATAGCATCTGTTCATGGGTTCTGTGCACGCCTAGTCTCC  200

seq1  AGTTGAGTGCGCTCACGGTCATGACTTTAAAAGCAACCAACAACGATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGTGCGCTCACGGTCATGACTTTAAAAGCAACCAACAACGATTGA  250

seq1  CTTAAGTAAGTGATTTAAGTTCATCTCACTTGTGGAGAATCGATCTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTAAGTGATTTAAGTTCATCTCACTTGTGGAGAATCGATCTCCCA  300

seq1  GGTGTATCATCATCTGCCCAGGGTCCCACAGCTTCCGGGTGATGTAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATCATCATCTGCCCAGGGTCCCACAGCTTCCGGGTGATGTAACCA  350

seq1  CTCTGATTCCATCTGGGAGACTGCGCTACAGTCTCTTTTGGACACATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATTCCATCTGGGAGACTGCGCTACAGTCTCTTTTGGACACATATT  400

seq1  GGATGTTTGCTAGAACCTTCTATGGATGAGTTAAATGCATCTAGTGATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTTGCTAGAACCTTCTATGGATGAGTTAAATGCATCTAGTGATGG  450

seq1  GGAGGAGCCATGAAGCCAGGCTGGAAATGTAAAATCTAGGAGGAGGCGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGCCATGAAGCCAGGCTGGAAATGTAAAATCTAGGAGGAGGCGGT  500

seq1  TTGTGTTGTGGGTTCCCCTGGCGAGAGGGCCTTCCAGCCTTGTGGCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTGTGGGTTCCCCTGGCGAGAGGGCCTTCCAGCCTTGTGGCTCTA  550

seq1  TGGCAGGGTTGTGGTTTGGAGATGAAAAGTCCCTACAGGCACATAGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGGTTGTGGTTTGGAGATGAAAAGTCCCTACAGGCACATAGTTTG  600

seq1  AATACTTGTTTTCTGGCTGGTGGCGCTA-TTTTGAGAGGCTGTGGGACCC  649
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATACTTGTTTTCTGGCTGGTGGCGCTATTTTTGAGAGGCTGTGGGACCC  650

seq1  TTATGGTATGAGGCCTCACCAGTGAGAGTTGGTCATAGGGACAGGCCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTATGAGGCCTCACCAGTGAGAGTTGGTCATAGGGACAGGCCTTT  700

seq1  GAAGTGGATGGCTCACCACTGGTCGTGGCCTCTTTCTCTCCTTCCTGGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGATGGCTCACCACTGGTCGTGGCCTCTTTCTCTCCTTCCTGGTC  750

seq1  TACAAGATTCTCAAATCTTCCACCCCCATCCCCACTCCCACGCACAGTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGATTCTCAAATCTTCCACCCCCATCCCCACTCCCACGCACAGTCT  800

seq1  CTGCCATGTCTCGGCTACCACGATGGGCCACGTCTGTTGAAGCTTCAGGC  849
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  CTGCCATGTCTCGGCTACCACGATGGGCCACGTCTTTTGTAGCTTCAGGC  850

seq1  TCAAAGTCTTTCCGTCCGATATTTCTAGCAGGATACTCCATGTCCATGGA  899
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCAAAGTCTTTCCGTCCGATATTTCTAGCAGG-TACTCCATGTCCATGGA  899

seq1  GCACCTCTGGCCTGCCCACCTCCATGCCGAAGTGAGCTCTCTTGTCCCGC  949
      |||||||||| |||||||||||||||||||||||||||||| ||||| ||
seq2  GCACCTCTGGGCTGCCCACCTCCATGCCGAAGTGAGCTCTC-TGTCCTGC  948

seq1  CGAGCTCCCCCTGCACCTCAGCCACCTCAGGTCTCCAAGTCAGTTTCAAC  999
      ||||||||||||||||||||||||| | ||   |||||||||||||| ||
seq2  CGAGCTCCCCCTGCACCTCAGCCACTTAAGTCTTCCAAGTCAGTTTC-AC  997

seq1  ACCTCCCTGTGGGACAAGCAAATGAGACACTGGCAGCCAGGAGGCA  1045
      | || ||||  |||  ||| ||||| ||||||||||||||||||||
seq2  AACTTCCTGGTGGA-TAGC-AATGATACACTGGCAGCCAGGAGGCA  1041