BAC Information

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BAC

Clone NameB6Ng01-147P17
Chromosome8 (Build37)
Map Location 126,950,637 - 127,089,366
singlet/doubletdoublet
Overlap genePgbd5, Cog2, Agt
Upstream geneDef8, Afg3l1, Dbndd1, Gas8, Rn5s-ps1, Rhou, LOC100042484, LOC100042490, Rab4a, 1700054N08Rik, LOC100043296, Acta1, Nup133, Abcb10, Taf5l, AK122209, LOC100042530, LOC100042535, Galnt2
Downstream geneCapn9, 2310022B05Rik, Ttc13, Arv1, 2310031A18Rik, LOC668444, Trim67, 2810004N23Rik, Gnpat, Exoc8, Gm505, Egln1, Tsnax, Disc1, Sipa1l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147P17.bB6Ng01-147P17.g
ACCDH944708DH944709
length908976
definitionDH944708|Mus musculus domesticus DNA, BAC clone: B6Ng01-147P17, 5' end.DH944709|Mus musculus domesticus DNA, BAC clone: B6Ng01-147P17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,088,459 - 127,089,366)(126,950,637 - 126,951,609)
sequence
atggcagaggctgaagcaggagggttacaagctcatataatatagtgatt
tcaaggttaagcagggcgatttactggactttgtcttacaataaaaagtc
aaaagagaactagagatgtaactcgttgatagaatgctttccaagcatgc
acgagagcctgggtcaatccctagcccacttagaaactacaagtggtggg
gtgcacctgtaatgcgggaggtggaggcaggaggattagaactccaagcc
atcctactctatacatggtgagttcaagaccagctggggctgcatgaacc
ttgtctggagtgggctgtaatggtacagcacctacctagcaactcaagaa
gcctcggactccatcgtcagacaggcacaccgcagggccctggaggtggg
aatgttagcaaggagatctgggagcagttcagtggatgagtgtgctttcc
acccggaacatcctgggttcccacggatctctgactgctctccttctcct
gactggcccccgctgtaggtgccgtctcctgggctatctacagcagccgc
gcttttggctttgagtgagttcttaagtacatagcaaacaaaagcagaaa
cagaccgcaagggatggctagaagcgccagacacatggcaaacatcagat
caggctctgaagacacccagcagagaccgactgtacaaacacacgtgcac
accctggaatgggatgaagaaaagtcagcctgactcccaaagccagtagc
tcagagagtgtgaacagcacatggctatttagccacaggatgtacattat
agccactgggaataccagggtagctaaaggttggcttcagggctctaaat
aatctcttgtcactctcgaaaaatgttttcccaggataccacagaagcaa
atgcacag
gaattctctttttaaaaaatatgagacgcgcgataatatgaatgcgtctt
agaagtgtaatacaagcaacattactttaggagataaagctctagtgctg
tctctcggagagggagacagacgctggctctggggcgcaggggagtcttc
taggtcttgaggtgtccttgacttgtgtctgtgtgggtgtgtgaatgcac
catataaaatgtcatatgcaccccttgcctgctacactccctacaaatac
ttcattgagtgcaaggcacataacccccaaacccacctgaaaggtgatgt
taatcactttggagctgagcatctgtcctgattagtttccactgtcaact
tgacagcatctagagtccctggggagggacttcggctgacacgcagccta
gatcaggccgtgaacatgtgtgggggacatcatcctgacagccttctttc
atggtttctgccttccatgactttcccatcctccctcaatgatagaacat
ggaagtttaagatgaagtaaacactttcctcccccaagcagcttttagtc
agtgtcttattgcaatgggatgaaagtacaacaatgcccccaaaagcttt
ggtccccaaggcaagagccttcacccactgtgatggtttgcaatatgctc
agcccagggagtggtactattagaagatgtgaccttgttggagtaggggt
gtggaagccagtagtctgctagcagccttcagatgaagatgtagaactct
cagcttcctcttgtccatgcctgcctggacactgccatgtttcctgcctt
gatgataatggattgaacctctgaacctgttagcggggccccaattaaat
gttgttcttataaaagttgccttgtcttggtgtctgttcacagcagtaaa
acccttagacacccacttgatggatctcaagctggcggcttctctaggaa
gtgtggaaatattaagtctgaaagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_127088459_127089366
seq2: B6Ng01-147P17.b_58_965 (reverse)

seq1  CTGTGCATTTGCTTCTGT-GTATCCTGGAAAAACATTTTTCGAGAGTGAC  49
      |||||||||||||||||| ||||||||| |||||||||||||||||||||
seq2  CTGTGCATTTGCTTCTGTGGTATCCTGGGAAAACATTTTTCGAGAGTGAC  50

seq1  AAGAGATTATTTAGAGCCCTGAAGCCAAACCTTTAGCTACCCTGGTATTC  99
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAGAGATTATTTAGAGCCCTGAAGCC-AACCTTTAGCTACCCTGGTATTC  99

seq1  CCAGTGGCTATAATGTACATCCTGTGGCTAAATAGCCATGTGCTGTTCAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGCTATAATGTACATCCTGTGGCTAAATAGCCATGTGCTGTTCAC  149

seq1  ACTCTCTGAGCTACTGGCTTTGGGAGTCAGGCTGACTTTTCTTCATCCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTGAGCTACTGGCTTTGGGAGTCAGGCTGACTTTTCTTCATCCCA  199

seq1  TTCCAGGGTGTGCACGTGTGTTTGTACAGTCGGTCTCTGCTGGGTGTCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGGTGTGCACGTGTGTTTGTACAGTCGGTCTCTGCTGGGTGTCTT  249

seq1  CAGAGCCTGATCTGATGTTTGCCATGTGTCTGGCGCTTCTAGCCATCCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCTGATCTGATGTTTGCCATGTGTCTGGCGCTTCTAGCCATCCCT  299

seq1  TGCGGTCTGTTTCTGCTTTTGTTTGCTATGTACTTAAGAACTCACTCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGTCTGTTTCTGCTTTTGTTTGCTATGTACTTAAGAACTCACTCAAA  349

seq1  GCCAAAAGCGCGGCTGCTGTAGATAGCCCAGGAGACGGCACCTACAGCGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAAGCGCGGCTGCTGTAGATAGCCCAGGAGACGGCACCTACAGCGG  399

seq1  GGGCCAGTCAGGAGAAGGAGAGCAGTCAGAGATCCGTGGGAACCCAGGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGTCAGGAGAAGGAGAGCAGTCAGAGATCCGTGGGAACCCAGGAT  449

seq1  GTTCCGGGTGGAAAGCACACTCATCCACTGAACTGCTCCCAGATCTCCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCGGGTGGAAAGCACACTCATCCACTGAACTGCTCCCAGATCTCCTT  499

seq1  GCTAACATTCCCACCTCCAGGGCCCTGCGGTGTGCCTGTCTGACGATGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACATTCCCACCTCCAGGGCCCTGCGGTGTGCCTGTCTGACGATGGA  549

seq1  GTCCGAGGCTTCTTGAGTTGCTAGGTAGGTGCTGTACCATTACAGCCCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGAGGCTTCTTGAGTTGCTAGGTAGGTGCTGTACCATTACAGCCCAC  599

seq1  TCCAGACAAGGTTCATGCAGCCCCAGCTGGTCTTGAACTCACCATGTATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACAAGGTTCATGCAGCCCCAGCTGGTCTTGAACTCACCATGTATA  649

seq1  GAGTAGGATGGCTTGGAGTTCTAATCCTCCTGCCTCCACCTCCCGCATTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGATGGCTTGGAGTTCTAATCCTCCTGCCTCCACCTCCCGCATTA  699

seq1  CAGGTGCACCCCACCACTTGTAGTTTCTAAGTGGGCTAGGGATTGACCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGCACCCCACCACTTGTAGTTTCTAAGTGGGCTAGGGATTGACCCA  749

seq1  GGCTCTCGTGCATGCTTGGAAAGCATTCTATCAACGAGTTACATCTCTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCGTGCATGCTTGGAAAGCATTCTATCAACGAGTTACATCTCTAG  799

seq1  TTCTCTTTTGACTTTTTATTGTAAGACAAAGTCCAGTAAATCGCCCTGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTGACTTTTTATTGTAAGACAAAGTCCAGTAAATCGCCCTGCT  849

seq1  TAACCTTGAAATCACTATATTATATGAGCTTGTAACCCTCCTGCTTCAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTGAAATCACTATATTATATGAGCTTGTAACCCTCCTGCTTCAGC  899

seq1  CTCTGCCAT  908
      |||||||||
seq2  CTCTGCCAT  908

seq1: chr8_126950637_126951609
seq2: B6Ng01-147P17.g_72_1047

seq1  GAATTCTCTTTTTAAAAAATATGAGACGCGCGATAATATGAATGCGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTTAAAAAATATGAGACGCGCGATAATATGAATGCGTCTT  50

seq1  AGAAGTGTAATACAAGCAACATTACTTTAGGAGATAAAGCTCTAGTGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTAATACAAGCAACATTACTTTAGGAGATAAAGCTCTAGTGCTG  100

seq1  TCTCTCGGAGAGGGAGACAGACGCTGGCTCTGGGGCGCAGGGGAGTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCGGAGAGGGAGACAGACGCTGGCTCTGGGGCGCAGGGGAGTCTTC  150

seq1  TAGGTCTTGAGGTGTCCTTGACTTGTGTCTGTGTGGGTGTGTGAATGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTTGAGGTGTCCTTGACTTGTGTCTGTGTGGGTGTGTGAATGCAC  200

seq1  CATATAAAATGTCATATGCACCCCTTGCCTGCTACACTCCCTACAAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAATGTCATATGCACCCCTTGCCTGCTACACTCCCTACAAATAC  250

seq1  TTCATTGAGTGCAAGGCACATAACCCCCAAACCCACCTGAAAGGTGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGAGTGCAAGGCACATAACCCCCAAACCCACCTGAAAGGTGATGT  300

seq1  TAATCACTTTGGAGCTGAGCATCTGTCCTGATTAGTTTCCACTGTCAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACTTTGGAGCTGAGCATCTGTCCTGATTAGTTTCCACTGTCAACT  350

seq1  TGACAGCATCTAGAGTCCCTGGGGAGGGACTTCGGCTGACACGCAGCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCATCTAGAGTCCCTGGGGAGGGACTTCGGCTGACACGCAGCCTA  400

seq1  GATCAGGCCGTGAACATGTGTGGGGGACATCATCCTGACAGCCTTCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGGCCGTGAACATGTGTGGGGGACATCATCCTGACAGCCTTCTTTC  450

seq1  ATGGTTTCTGCCTTCCATGACTTTCCCATCCTCCCTCAATGATAGAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCTGCCTTCCATGACTTTCCCATCCTCCCTCAATGATAGAACAT  500

seq1  GGAAGTTTAAGATGAAGTAAACACTTTCCTCCCCCAAGCAGCTTTTAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTTAAGATGAAGTAAACACTTTCCTCCCCCAAGCAGCTTTTAGTC  550

seq1  AGTGTCTTATTGCAATGGGATGAAAGTACAACAATGCCCCCAAAAGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTTATTGCAATGGGATGAAAGTACAACAATGCCCCCAAAAGCTTT  600

seq1  GGTCCCCAAGGCAAGAGCCTTCACCCACTGTGATGGTTTGCAATATGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCAAGGCAAGAGCCTTCACCCACTGTGATGGTTTGCAATATGCTC  650

seq1  AGCCCAGGGAGTGGTACTATTAGAAGATGTGACCTTGTTGGAGTAGGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGGAGTGGTACTATTAGAAGATGTGACCTTGTTGGAGTAGGGGT  700

seq1  GTGGAAGCCAGTAGTCTGCTAGCAGCCTTCAGATGAAGATGTAGAACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGCCAGTAGTCTGCTAGCAGCCTTCAGATGAAGATGTAGAACTCT  750

seq1  CAGC-TCCTCTTGTACCATGCCTGCCTGGACACTGCCATG-TTCCTGCCT  798
      |||| ||||||||| ||||||||||||||||||||||||| |||||||||
seq2  CAGCTTCCTCTTGT-CCATGCCTGCCTGGACACTGCCATGTTTCCTGCCT  799

seq1  TGATGATAATGGATTGAACCTCTGAACCTGTAAGCGGGGCCCCAATTAAA  848
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGATGATAATGGATTGAACCTCTGAACCTGTTAGCGGGGCCCCAATTAAA  849

seq1  TGTTGTCCTTATAAGAGTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTA  898
      |||||| ||||||| ||||||||| ||| |||||||||||||||||||||
seq2  TGTTGTTCTTATAAAAGTTGCCTT-GTCTTGGTGTCTGTTCACAGCAGTA  898

seq1  AAACCCTAAGACACCCAC-TGATGGATCACAAGCTGGCGGC-TCTCTAGG  946
      ||||||| |||||||||| ||||||||| |||||||||||| ||||||||
seq2  AAACCCTTAGACACCCACTTGATGGATCTCAAGCTGGCGGCTTCTCTAGG  948

seq1  AAG-GTGGAAATATGAAGTCTGAAGGTA  973
      ||| |||||||||| ||||||||| |||
seq2  AAGTGTGGAAATATTAAGTCTGAAAGTA  976