BAC Information

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BAC

Clone NameB6Ng01-148A21
Chromosome8 (Build37)
Map Location 17,990,083 - 18,121,049
singlet/doubletdoublet
Overlap geneLOC665638
Upstream geneCsmd1
Downstream geneLOC100040466, Mcph1, Angpt2, Agpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148A21.bB6Ng01-148A21.g
ACCDH944764DH944765
length1,1381,103
definitionDH944764|Mus musculus domesticus DNA, BAC clone: B6Ng01-148A21, 5' end.DH944765|Mus musculus domesticus DNA, BAC clone: B6Ng01-148A21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,990,083 - 17,991,221)(18,119,954 - 18,121,049)
sequence
gaattctcagtgggagccctgaatgctgccaggggagcacttgatctgcc
tgtttgaagtcctgaaagaatacagctccagatgagattattgtattcat
aagttctctaaagtcagagtaataacaacaaccttccatgacagtcagac
actaaattagttcacaatcactaagccagcactacagaagacactattac
tttacccaaaaagatgggtgaaaggaagatgtaatcatgaaagcttgaga
aaccataagtctcattagaataattaatgaacaagtgagtatttggggtg
gggagttaaagttactaactcaataaacagcaaatcaccaagatgaagaa
gagaaaaattaaactgtgccactcaacaatcactaaaatgtaaatgtgat
taaccccaactttccaattaaagatggagactgcctgactagattaagaa
ataagatccagctggctgttgtgtgcaagaaactcaggacaataatgata
tacaaaccaaaagcacaaggggtctaggcaaatgggacatgaagacaaat
agaaatggttatggtatctgacaaatccaacttcaaactaaaagtaatca
gaaataattaagaaatccattgtgcattaataaagagagaagatcagcag
gaagttttgaggaccataaacataaattcactgaatgttgagttgtatag
acggtctctgtttaaattccgtttttctattaagtgatgttcagttccca
gacttcagattataatgaagcctggtttaattaaacaaggccctaacaca
ggaaatattcattttctttgatgaagtatttacaaactgcaaaagataac
ttagtttctcaatgcattcaaaagtttattttaaaaacgaaaaaaatcgt
caatctaattaacattttgccaactcttttttttttccaagactaaatgc
attttgaaaagttctctagggtgtcaacatcttcagtgggcaaacttcct
taagatttcacagcccaacctattcatttgctgccaaaggagaacagggg
tgctgaggcagtattggaccaactgtttggaaaagagttaaggtaaagct
gaattctgctgctggtgtccatccaatcttagggagaa
gaattcttataagctctgtcatcactgtcatttttattacatttattacc
tatttatttgtgggttcacatgtatgggtatatgagagctattgtgtttc
tgtggaaatcagaaaataacttctgggagttggtgttttctaccaaccat
gtgtatccttggggtcaaactcaggttctcagccttggggcaagcactgt
tatccactgaactatcttgaagggcctcatcttttgattcttacttgagg
taaatgttttcatagacaaacagagcatttccagttaggccaccgaacac
attttgagattttgtttaattggggcattttattacagctttactaagtg
gacacaaagaatatgactcatgaggacctatttggggggggggtccatgc
cttacttgggtatgccgtacttcctgtgactcttcctttctgtccatgct
cacactctcagatgtgacttatttcctctgagcagctctgtttctcccaa
cccctctgtttaagcatttgtaaaacatcattaataatatacccagccct
gccgtataaaaattggcaattaaatatgctagcaatatgtttctagttct
gagcttcactgaatataggtattaacatagatgtaaaatttagagaattg
attaaaaatcatctttttaatctaagttttccccttgaaatattatacta
aacctttgatcagaaaacagaagtatctggattttgataaatttaacagg
aatgtatggtaaattggagatgtttgattggcaagtatcatgtaagctga
tttgtggattaatgctcccagaagaatctcatgagtgttctctttgactc
tgccttgcttcttatttgtttaatcacttaatttaaaaaatggcatagaa
tattcattgaataattttatgatgatttttatacatgctgcatttgctga
gccctggccctttgaccagcgatacagactgactgtagagctcaaacatc
ttcagcttattagatgattagaaggttggagaaagcacaaccatgtatgt
gcctaggaaggaataattcttacatgatttcctcatggaactcatcacca
gta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_17990083_17991221
seq2: B6Ng01-148A21.b_38_1175

seq1  GAATTCTCAGTGGGAGCCCTGAATGCTGCCAGGGGAGCACTTGATCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTGGGAGCCCTGAATGCTGCCAGGGGAGCACTTGATCTGCC  50

seq1  TGTTTGAAGTCCTGAAAGAATACAGCTCCAGATGAGATTATTGTATTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAAGTCCTGAAAGAATACAGCTCCAGATGAGATTATTGTATTCAT  100

seq1  AAGTTCTCTAAAGTCAGAGTAATAACAACAACCTTCCATGACAGTCAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTCTAAAGTCAGAGTAATAACAACAACCTTCCATGACAGTCAGAC  150

seq1  ACTAAATTAGTTCACAATCACTAAGCCAGCACTACAGAAGACACTATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATTAGTTCACAATCACTAAGCCAGCACTACAGAAGACACTATTAC  200

seq1  TTTACCCAAAAAGATGGGTGAAAGGAAGATGTAATCATGAAAGCTTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCAAAAAGATGGGTGAAAGGAAGATGTAATCATGAAAGCTTGAGA  250

seq1  AACCATAAGTCTCATTAGAATAATTAATGAACAAGTGAGTATTTGGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAAGTCTCATTAGAATAATTAATGAACAAGTGAGTATTTGGGGTG  300

seq1  GGGAGTTAAAGTTACTAACTCAATAAACAGCAAATCACCAAGATGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTAAAGTTACTAACTCAATAAACAGCAAATCACCAAGATGAAGAA  350

seq1  GAGAAAAATTAAACTGTGCCACTCAACAATCACTAAAATGTAAATGTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAATTAAACTGTGCCACTCAACAATCACTAAAATGTAAATGTGAT  400

seq1  TAACCCCAACTTTCCAATTAAAGATGGAGACTGCCTGACTAGATTAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCAACTTTCCAATTAAAGATGGAGACTGCCTGACTAGATTAAGAA  450

seq1  ATAAGATCCAGCTGGCTGTTGTGTGCAAGAAACTCAGGACAATAATGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATCCAGCTGGCTGTTGTGTGCAAGAAACTCAGGACAATAATGATA  500

seq1  TACAAACCAAAAGCACAAGGGGTCTAGGCAAATGGGACATGAAGACAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACCAAAAGCACAAGGGGTCTAGGCAAATGGGACATGAAGACAAAT  550

seq1  AGAAATGGTTATGGTATCTGACAAATCCAACTTCAAACTAAAAGTAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGTTATGGTATCTGACAAATCCAACTTCAAACTAAAAGTAATCA  600

seq1  GAAATAATTAAGAAATCCATTGTGCATTAATAAAGAGAGAAGATCAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATTAAGAAATCCATTGTGCATTAATAAAGAGAGAAGATCAGCAG  650

seq1  GAAGTTTTGAGGACCATAAACATAAATTCACTGAATGTTGAGTTGTATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTTGAGGACCATAAACATAAATTCACTGAATGTTGAGTTGTATAG  700

seq1  ACGGTCTCTGTTTAAATTCCGTTTTTCTATTAAGTGATGTTCAGTTCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCTCTGTTTAAATTCCGTTTTTCTATTAAGTGATGTTCAGTTCCCA  750

seq1  GACTTCAGATTATAATGAAGCCTGGTTTAATTAAACAAGGCCCTAACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAGATTATAATGAAGCCTGGTTTAATTAAACAAGGCCCTAACACA  800

seq1  GGAAATATTCATTTTCTTTGATGAAGTATTTACAAACTGCAAAAGATAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATATTCATTTTCTTTGATGAAGTATTTACAAACTGCAAAAGATAAC  850

seq1  TTAGTTTCTCAATGCATTCAAAAGTTTATTTTAAAAACGAAAAAAATCGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTCTCAATGCATTCAAAAGTTTATTTTAAAAACGAAAAAAATCGT  900

seq1  CAATCTAATTAACATTTTGCCAACTCTTTTTTTTTTCCAAGACTAAATGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTAATTAACATTTTGCCAACTCTTTTTTTTTTCCAAGACTAAATGC  950

seq1  ATTTTGAAAAGTTCTCTAGGGTGTCAACATCTTCAGTGGGCAAACTTCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAAAAGTTCTCTAGGGTGTCAACATCTTCAGTGGGCAAACTTCCT  1000

seq1  TAAGGATTTCACAGCCCAACCTATTCATTTGCTGCAAAGGGAG-ACAGGG  1049
      ||| ||||||||||||||||||||||||||||||| || |||| ||||||
seq2  TAA-GATTTCACAGCCCAACCTATTCATTTGCTGCCAAAGGAGAACAGGG  1049

seq1  GTGCTGAGGCAGGGTATGGACCAACTGGTTGGAAAAGAGTTAAAGTAGAG  1099
      ||||||||||||  | ||||||||||| ||||||||||||||| ||| ||
seq2  GTGCTGAGGCAGTAT-TGGACCAACTGTTTGGAAAAGAGTTAAGGTAAAG  1098

seq1  CTGAATTCTGCTGCCTGGTTGTCATCCAATC-TAGGGAGAA  1139
      ||||||||||||| |||||   ||||||||| |||||||||
seq2  CTGAATTCTGCTG-CTGGTGTCCATCCAATCTTAGGGAGAA  1138

seq1: chr8_18119954_18121049
seq2: B6Ng01-148A21.g_65_1167 (reverse)

seq1  TACTGGTGATGAGTTCAATGA-GAAATCATGGTAG-ATTATTCC-TCCTA  47
      |||||||||||||||| |||| |||||||||  || |||||||| |||||
seq2  TACTGGTGATGAGTTCCATGAGGAAATCATGTAAGAATTATTCCTTCCTA  50

seq1  -GCACATACATG--TGTGCTTTCTCCAAC--TCTAATCAATCTAAT-AGC  91
       |||||||||||  |||||||||||||||  ||||||| ||||||| |||
seq2  GGCACATACATGGTTGTGCTTTCTCCAACCTTCTAATC-ATCTAATAAGC  99

seq1  TGGAGATGTTTGAGCTCTACAGTCAGTCTGTATTCGCT-GTCAAAGGGCC  140
      || ||||||||||||||||||||||||||||| ||||| |||||||||||
seq2  TGAAGATGTTTGAGCTCTACAGTCAGTCTGTA-TCGCTGGTCAAAGGGCC  148

seq1  AGGGCTCAGCAAATTGCAGCATGTAT-AAAATCATCATTAAAATTATTCA  189
      ||||||||||||| |||||||||||| |||||||||| ||||||||||||
seq2  AGGGCTCAGCAAA-TGCAGCATGTATAAAAATCATCA-TAAAATTATTCA  196

seq1  ATGAATATTCTATGCCATTTTTTAAATTAAGTGATTAAACAAATAAGAAG  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATTCTATGCCATTTTTTAAATTAAGTGATTAAACAAATAAGAAG  246

seq1  CAAGGCAGAGTCAAAGAGAACACTCATGAGATTCTTCTGGGAGCATTAAT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGAGTCAAAGAGAACACTCATGAGATTCTTCTGGGAGCATTAAT  296

seq1  CCACAAATCAGCTTACATGATACTTGCCAATCAAACATCTCCAATTTACC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATCAGCTTACATGATACTTGCCAATCAAACATCTCCAATTTACC  346

seq1  ATACATTCCTGTTAAATTTATCAAAATCCAGATACTTCTGTTTTCTGATC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTCCTGTTAAATTTATCAAAATCCAGATACTTCTGTTTTCTGATC  396

seq1  AAAGGTTTAGTATAATATTTCAAGGGGAAAACTTAGATTAAAAAGATGAT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTTAGTATAATATTTCAAGGGGAAAACTTAGATTAAAAAGATGAT  446

seq1  TTTTAATCAATTCTCTAAATTTTACATCTATGTTAATACCTATATTCAGT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCAATTCTCTAAATTTTACATCTATGTTAATACCTATATTCAGT  496

seq1  GAAGCTCAGAACTAGAAACATATTGCTAGCATATTTAATTGCCAATTTTT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCAGAACTAGAAACATATTGCTAGCATATTTAATTGCCAATTTTT  546

seq1  ATACGGCAGGGCTGGGTATATTATTAATGATGTTTTACAAATGCTTAAAC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGGCAGGGCTGGGTATATTATTAATGATGTTTTACAAATGCTTAAAC  596

seq1  AGAGGGGTTGGGAGAAACAGAGCTGCTCAGAGGAAATAAGTCACATCTGA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGTTGGGAGAAACAGAGCTGCTCAGAGGAAATAAGTCACATCTGA  646

seq1  GAGTGTGAGCATGGACAGAAAGGAAGAGTCACAGGAAGTACGGCATACCC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGAGCATGGACAGAAAGGAAGAGTCACAGGAAGTACGGCATACCC  696

seq1  AAGTAAGGCATGGACCCCCCCCCCAAATAGGTCCTCATGAGTCATATTCT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGGCATGGACCCCCCCCCCAAATAGGTCCTCATGAGTCATATTCT  746

seq1  TTGTGTCCACTTAGTAAAGCTGTAATAAAATGCCCCAATTAAACAAAATC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCCACTTAGTAAAGCTGTAATAAAATGCCCCAATTAAACAAAATC  796

seq1  TCAAAATGTGTTCGGTGGCCTAACTGGAAATGCTCTGTTTGTCTATGAAA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGTGTTCGGTGGCCTAACTGGAAATGCTCTGTTTGTCTATGAAA  846

seq1  ACATTTACCTCAAGTAAGAATCAAAAGATGAGGCCCTTCAAGATAGTTCA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACCTCAAGTAAGAATCAAAAGATGAGGCCCTTCAAGATAGTTCA  896

seq1  GTGGATAACAGTGCTTGCCCCAAGGCTGAGAACCTGAGTTTGACCCCAAG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATAACAGTGCTTGCCCCAAGGCTGAGAACCTGAGTTTGACCCCAAG  946

seq1  GATACACATGGTTGGTAGAAAACACCAACTCCCAGAAGTTATTTTCTGAT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACATGGTTGGTAGAAAACACCAACTCCCAGAAGTTATTTTCTGAT  996

seq1  TTCCACAGAAACACAATAGCTCTCATATACCCATACATGTGAACCCACAA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAGAAACACAATAGCTCTCATATACCCATACATGTGAACCCACAA  1046

seq1  ATAAATAGGTAATAAATGTAATAAAAATGACAGTGATGACAGAGCTTATA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAGGTAATAAATGTAATAAAAATGACAGTGATGACAGAGCTTATA  1096

seq1  AGAATTC  1096
      |||||||
seq2  AGAATTC  1103