BAC Information

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BAC

Clone NameB6Ng01-149O23
Chromosome8 (Build37)
Map Location 128,303,652 - 128,304,646
singlet/doubletsinglet
Overlap geneE330039K12Rik
Upstream geneTrim67, 2810004N23Rik, Gnpat, Exoc8, Gm505, Egln1, Tsnax, Disc1, Sipa1l2, 4933403G14Rik, 2310079N02Rik
Downstream geneBC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149O23.bB6Ng01-149O23.g
ACCDH946140DH946141
length1,1281,006
definitionDH946140|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O23, 5' end.DH946141|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctgacaaatagagactctccacagatacttaaaagttacact
catacaagaatttatcagggcccaggaaataggggggttgtggtattgca
ttattcatgagcaggtctgctagagcagaacccctggtggtgggcttaac
aatagactagcattacacctggctcccttcttagtggcagcggcctggtc
cccgccttcttttgatgtatacattccttttgtattgtgtcactgtaact
cggtggattgtatctcgcctggtttcttcttattcttctgtataaaatgt
tcgatgctcaacttgacagattacattcggattctacacaacctcctgtg
tgcatctgtctgtcattttcactgactccttgcccatctgcacctagaga
cccgccctatgcagacaagggacccaagagggtctgcagcaaccatgata
acctggaacttgtaatcctcctgcctctacctcctgagtgctctgaatag
catgttattggcactctcatgttattcacactctcaggtttatggagttc
tgggatagagcccagggcaccacgaaacccaagcaaggcctccaccaaca
agcttcgccgcttagcctcatgagtgacccatttcaaaatacaaccttca
gtcacaactcaatgagttaaaggataacacttatagttacttgttatgac
tgtagttcgtaatccctttgggggaaaccgagaatcctgcaaacttccaa
accatctctccaatgtgttctcttctttatgggggaaaaatattttgggt
gattgtgtcagcacacagatatcagagcattcaggccgacagccattgct
ccatcttagcagagcctcaagccaagctcctgtaggaacggcagaagagt
ctcaagtagggctgtgcactttcctgagccttgaaagacaagcagacacc
tcctggatctatgtgacagacaagagcttaaaaaggaacccctcaagaaa
ctcatctactaagaaaacactgcgaggagctacaggcagccagaagacct
ggacatccaagttctactggggcccttggaacttcttctaggaatggctt
cccagggtaaattgaagccaatactaca
gaattctacagagttttaatattagtgggagggctgtgtgtggatctcca
gctaagataaaactttgagttggatcagctgtgagtgagattaggctaca
gggctagtttcacacgtccccacgggccagtgattatggggtcagccaaa
ccgtgagaaggctgataacatctcccacagacaggagcgtaaatcttgct
tttagttgttttctagctccaacgggaatgggtcgctacatccctactgt
accttcagtgtcccttctgcaaggctcaccaagatgctgagcagagagaa
cggcctgcagggtgggaccacattaaaatctgaagggagtctgagaaaat
gagatttaaaattttaataacaaatagacttgaaaaatgtttagacaatc
cttacctcagtctttccttatttaaccccctccctccctccctcctcctt
ctctccattctcctcccctccctcctttttctcttctgtcttcctttccc
tccctcctcctttccccctccattcccctccctcttcctcctcccctctc
tccttcttgtcttttgtcctccttcccctccctcctcccctccttcatct
cccttcctcatctccctcctttccctccgtccttccctccctcctcccct
cctttccccctcctcccctccttcatgtcccttccctcctctccctcctt
ctctccctcttttcccctccctccctttccctcctctcccttctcttcct
ctctccttcccttttcctttttccctctcctcctcttccaccatcccatc
cccccctcactcccttttccatttctatttccttccctccctcgttccct
ctcatcttcggcggccctcccctttctattcacagtaacaaccctaaatg
ttgcttatcaaaacttgcctccttctcagtagcaggccaagaagcaccct
gtctcctctagtacatccaactcccagtggtcacccaacccccattcaag
ggcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_128303652_128304646
seq2: B6Ng01-149O23.g_66_1071

seq1  GAATTCTACAGAGTTTTAATATTAGTGGGAGGGCTGTGTGTGGATCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGAGTTTTAATATTAGTGGGAGGGCTGTGTGTGGATCTCCA  50

seq1  GCTAAGATAAAACTTTGAGTTGGATCAGCTGTGAGTGAGATTAGGCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGATAAAACTTTGAGTTGGATCAGCTGTGAGTGAGATTAGGCTACA  100

seq1  GGGCTAGTTTCACACGTCCCCACGGGCCAGTGATTATGGGGTCAGCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAGTTTCACACGTCCCCACGGGCCAGTGATTATGGGGTCAGCCAAA  150

seq1  CCGTGAGAAGGCTGATAACATCTCCCACAGACAGGAGCGTAAATCTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGAGAAGGCTGATAACATCTCCCACAGACAGGAGCGTAAATCTTGCT  200

seq1  TTTAGTTGTTTTCTAGCTCCAACGGGAATGGGTCGCTACATCCCTACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGTTTTCTAGCTCCAACGGGAATGGGTCGCTACATCCCTACTGT  250

seq1  ACCTTCAGTGTCCCTTCTGCAAGGCTCACCAAGATGCTGAGCAGAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAGTGTCCCTTCTGCAAGGCTCACCAAGATGCTGAGCAGAGAGAA  300

seq1  CGGCCTGCAGGGTGGGACCACATTAAAATCTGAAGGGAGTCTGAGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCTGCAGGGTGGGACCACATTAAAATCTGAAGGGAGTCTGAGAAAAT  350

seq1  GAGATTTAAAATTTTAATAACAAATAGACTTGAAAAATGTTTAGACAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTAAAATTTTAATAACAAATAGACTTGAAAAATGTTTAGACAATC  400

seq1  CTTACCTCAGTCTTTCCTTATTTAACCCCCTCCCTCCCTCCCTCCTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTCAGTCTTTCCTTATTTAACCCCCTCCCTCCCTCCCTCCTCCTT  450

seq1  CTCTCCATTCTCCTCCCCTCCCTCCTTTTTCTCTTCTGTCTTCCTTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATTCTCCTCCCCTCCCTCCTTTTTCTCTTCTGTCTTCCTTTCCC  500

seq1  TCCCTCCTCCTTTCCCCCTCCATTCCCCTCCCTCTTCCTCCTCCCCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTCCTTTCCCCCTCCATTCCCCTCCCTCTTCCTCCTCCCCTCTC  550

seq1  TCCTTCTTGTCTTTTGTCCTCCTTCCCCTCCCTCCTCCCCTCCTTCATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTGTCTTTTGTCCTCCTTCCCCTCCCTCCTCCCCTCCTTCATCT  600

seq1  CCCTTCCTCATCTCCCTCC-TTCCCTCCGTCCTTCCCTCCCTCCTCCCCT  649
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCCTTCCTCATCTCCCTCCTTTCCCTCCGTCCTTCCCTCCCTCCTCCCCT  650

seq1  CC-TTCCCCCTCCTCCCCTCCTTCATGTCCCTT-CCTCCTCTCCCTCCTT  697
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCTTTCCCCCTCCTCCCCTCCTTCATGTCCCTTCCCTCCTCTCCCTCCTT  700

seq1  CTCTCCCTCTTTTCCCCTCCTTCCC-TTCCCTCCTCTCCCTTCTCTTCCT  746
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  CTCTCCCTCTTTTCCCCTCCCTCCCTTTCCCTCCTCTCCCTTCTCTTCCT  750

seq1  CTCTCCTTCCTTTTTCCTTTCTTCCCTCTCCTCCTCTTCCACCATCCCAT  796
      |||||||||| ||||||||| |||||||||||||||||||||||||||||
seq2  CTCTCCTTCCCTTTTCCTTT-TTCCCTCTCCTCCTCTTCCACCATCCCAT  799

seq1  CCCCCCCTCACCTCCCTTTTCCATTTCTATTTCCTTCCCTCCCTCGTTTC  846
      |||||||||| ||||||||||||||||||||||||||||||||||||| |
seq2  CCCCCCCTCA-CTCCCTTTTCCATTTCTATTTCCTTCCCTCCCTCGTTCC  848

seq1  CTCTCATCTTCTGCTGCCCTCCCCTTTCTATTCACAGTAACAACCCTAAA  896
      ||||||||||| || |||||||||||||||||||||||||||||||||||
seq2  CTCTCATCTTCGGCGGCCCTCCCCTTTCTATTCACAGTAACAACCCTAAA  898

seq1  TG-TGCTTATCAAAACTTGCCTCCTTCTCAGTAGCAGCCCA--GAGCACC  943
      || |||||||||||||||||||||||||||||||||| |||   ||||||
seq2  TGTTGCTTATCAAAACTTGCCTCCTTCTCAGTAGCAGGCCAAGAAGCACC  948

seq1  CTGTCTCCTCTAGTACAT-CAACT-CCAGTGGTCACC--ACCCCC-TTC-  987
      |||||||||||||||||| ||||| ||||||||||||  |||||| ||| 
seq2  CTGTCTCCTCTAGTACATCCAACTCCCAGTGGTCACCCAACCCCCATTCA  998

seq1  AGGGCAAA  995
      ||||||||
seq2  AGGGCAAA  1006