BAC Information

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BAC

Clone NameB6Ng01-151A03
Chromosome2 (Build37)8 (Build37)
Map Location 32,639,782 - 32,640,340109,470,087 - 109,470,307
singlet/doubletsingletsinglet
Overlap gene1700019L03Rik
Upstream geneAbl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1
Downstream geneStxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151A03.bB6Ng01-151A03.g
ACCDH946940DH946941
length553860
definitionDH946940|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A03, 5' end.DH946941|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,639,782 - 32,640,340)(109,470,087 - 109,470,307)
sequence
cttcagctcctccaccatggccaactctggagtcttggtcccactggcat
ccttcttgccccctatcttcttgccctgcatctccttgcctcctttgttt
ggcttcttttttggagccatggctgatggcaaccactttttaaagtcccc
tttaagaagccaggtagttgctaaggaagttgtttccatacatagcaaca
gtgaggctgggttttaaagggctactgtcctcttcctgacaggatcctgt
gtccggcctaggcctagctttttcagagcaggataccaggctcttgagta
caagtttgggttccaggaagacctttccttccctcaaatggaaataaatt
agaatcataaaggaccttagcctttgggactttgggataatcagaaacaa
ttgctgagcccccaggctagtgtgtgcctctgcctagaccaacctgccaa
ttctttggtggcacagccacacattttgtattggaggctcccatgctggg
gtctcgggagatctttacttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtg
gaattcactctgtagaccagtctggcctcgaactcagaaatctgcctgtc
tctgcctcccaagtgctgggattaaaggcatgcaccaccactgcccagct
gtggttttgtttttgagacaagatctccctgtgtagctctggctggcctg
gaactcacagagatgcccctgcctctgcctgcggggattaaagctgtgct
ccaacacacctggcctaacacacacaatgtttttgtttgtttgctttctt
tttgtgagacagggtctcactgtgtatcactggctggcctagaactcaac
atgtagatcaggctggactggaactcacagaggtccacatgtctccaact
tctaagtgctgggactaaaatgtgcaccgtggacagcttggtttgggatt
tttatgagacaatctcactttacagcccaggctgtttgcgaacatgccat
cctcctgtttcagccttctgagggctagagtgacaggagtgtgccaccat
gcctggcttacgtttgtattttatgtgtatgcctggtgtgtgtgtgcatg
ttgcagtaagtgtacgatgtgtgcaggtgtgtgcaggtgtacaggtgtct
gcaggtgtgtgtaggtgtacatgcagtgactggaagcgttttcacagtcg
ctgtcttttattatttttatgtgtgtgagtgttttgcctgcttgtgtgtc
tgcagcttgtacacctggtacccatgggagatcagaagagggattggctc
atggattagctcgtggggctggagttataggacaggagcccacgatgctg
gtgctggaaatcaaaccgggtcttctgaaagaatattagtgctctcacca
ctgagccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32639782_32640340
seq2: B6Ng01-151A03.b_47_605

seq1  GAATTCCTTCAGCTCCTCCACCATGGCCAACTCTGGAGTCTTGGTCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCAGCTCCTCCACCATGGCCAACTCTGGAGTCTTGGTCCCAC  50

seq1  TGGCATCCTTCTTGCCCCCTATCTTCTTGCCCTGCATCTCCTTGCCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCCTTCTTGCCCCCTATCTTCTTGCCCTGCATCTCCTTGCCTCCT  100

seq1  TTGTTTGGCTTCTTTTTTGGAGCCATGGCTGATGGCAACCACTTTTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGGCTTCTTTTTTGGAGCCATGGCTGATGGCAACCACTTTTTAAA  150

seq1  GTCCCCTTTAAGAAGCCAGGTAGTTGCTAAGGAAGTTGTTTCCATACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCTTTAAGAAGCCAGGTAGTTGCTAAGGAAGTTGTTTCCATACATA  200

seq1  GCAACAGTGAGGCTGGGTTTTAAAGGGCTACTGTCCTCTTCCTGACAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGTGAGGCTGGGTTTTAAAGGGCTACTGTCCTCTTCCTGACAGGA  250

seq1  TCCTGTGTCCGGCCTAGGCCTAGCTTTTTCAGAGCAGGATACCAGGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTCCGGCCTAGGCCTAGCTTTTTCAGAGCAGGATACCAGGCTCT  300

seq1  TGAGTACAAGTTTGGGTTCCAGGAAGACCTTTCCTTCCCTCAAATGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACAAGTTTGGGTTCCAGGAAGACCTTTCCTTCCCTCAAATGGAAA  350

seq1  TAAATTAGAATCATAAAGGACCTTAGCCTTTGGGACTTTGGGATAATCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAGAATCATAAAGGACCTTAGCCTTTGGGACTTTGGGATAATCAG  400

seq1  AAACAATTGCTGAGCCCCCAGGCTAGTGTGTGCCTCTGCCTAGACCAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTGCTGAGCCCCCAGGCTAGTGTGTGCCTCTGCCTAGACCAACC  450

seq1  TGCCAATTCTTTGGTGGCACAGCCACACATTTTGTATTGGAGGCTCCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATTCTTTGGTGGCACAGCCACACATTTTGTATTGGAGGCTCCCAT  500

seq1  GCTGGGGTCTCGGGAGATCTTTACTTGTGTGTGTGTGTGTGTGTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGTCTCGGGAGATCTTTACTTGTGTGTGTGTGTGTGTGTGTGTGT  550

seq1  GTGTGTGTG  559
      |||||||||
seq2  GTGTGTGTG  559

seq1: chr8_109470087_109470307
seq2: B6Ng01-151A03.g_73_312

seq1  TCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCTTCACTCTG  50
      ||||| |||||||||| ||||||||||||||||||||| || |  |||||
seq2  TCACTCTGTAGACCAGTCTGGCCTCGAACTCAGAAATCTGCCTGTCTCTG  50

seq1  CCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCACCACTGCCCACTGCCCA  100
      ||||||||||||||||||||||||  ||| |||||||||||||  ||   
seq2  CCTCCCAAGTGCTGGGATTAAAGGCATGCACCACCACTGCCCA--GCTGT  98

seq1  GCTTT----------------TCGCCCCCCCCCCCCCAGGATGCCCTTGA  134
      | |||                || |||       | | || || ||| ||
seq2  GGTTTTGTTTTTGAGACAAGATCTCCCTGTGTAGCTCTGGCTGGCCTGGA  148

seq1  TCTC-------TGCCCCTCCTGCCTCTACCACCTGAGTGCTGGGATTTCG  177
       |||       ||||   ||||||||| ||       ||| ||||||   
seq2  ACTCACAGAGATGCC---CCTGCCTCTGCC-------TGCGGGGATT--A  186

seq1  AGTATGTGCTAC------CCTGTC--AGCTTTTTC--TGTTTTTGTTTGT  217
      |   |||||| |      |||| |  | |     |  |||||||||||||
seq2  AAGCTGTGCTCCAACACACCTGGCCTAACACACACAATGTTTTTGTTTGT  236

seq1  TTGC  221
      ||||
seq2  TTGC  240