BAC Information

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BAC

Clone NameB6Ng01-151C08
Chromosome4 (Build37)8 (Build37)
Map Location 17,191,787 - 17,192,01659,664,530 - 59,665,096
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC383994, LOC100040154, LOC667212, LOC100040173
Downstream geneMmp16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151C08.bB6Ng01-151C08.g
ACCDH947044DH947045
length2301,119
definitionDH947044|Mus musculus domesticus DNA, BAC clone: B6Ng01-151C08, 5' end.DH947045|Mus musculus domesticus DNA, BAC clone: B6Ng01-151C08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(17,191,787 - 17,192,016)(59,664,530 - 59,665,096)
sequence
actactgaaaacctgcaatattcacatcagcatcatagaaacacagaagc
agaacccaatttatgcattctcctgaatattgttgtcccaattttgccac
tgggaagaacactgtttagaaaaccaatcagtctctctctctctctctct
ctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgtga
gtgtgtgtgtgtgtttctgtgtgtgagtgg
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taagattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattcttgaa
tagttcttcttgtttccacttggttgatttcaccccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcagctgctattatgtgctctctcccgttttttct
tgagcactcatagctatgagtttcctctagaaatgctttcattgtgtccc
aaagtttgggtacgttgtgcttcattttcattaaactctaaaagtcttat
ttctttctttattccttccttgaccaagatatcaatgagaagaggtgtca
gtttcacgttgaatgttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_17191787_17192016
seq2: B6Ng01-151C08.b_53_282

seq1  ACTACTGAAAACCTGCAATATTCACATCAGCATCATAGAAACACAGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGAAAACCTGCAATATTCACATCAGCATCATAGAAACACAGAAGC  50

seq1  AGAACCCAATTTATGCATTCTCCTGAATATTGTTGTCCCAATTTTGCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCAATTTATGCATTCTCCTGAATATTGTTGTCCCAATTTTGCCAC  100

seq1  TGGGAAGAACACTGTTTAGAAAACCAATCAGTCTCTCTCTCTCTCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGAACACTGTTTAGAAAACCAATCAGTCTCTCTCTCTCTCTCTCT  150

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGA  200

seq1  GTGTGTGTGTGTGTTTCTGTGTGTGAGTGG  230
      ||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTTTCTGTGTGTGAGTGG  230

seq1: chr8_59664530_59665096
seq2: B6Ng01-151C08.g_633_1186 (reverse)

seq1  CCAACATTCACATGGAAACTGAACAACACTCTTCTCAATGATACCTTGGT  50
      ||||||||||    ||||||| |||   ||||||||| ||||| ||||||
seq2  CCAACATTCAACGTGAAACTG-ACA--CCTCTTCTCATTGATATCTTGGT  47

seq1  CAAGGAAGGAATAAAGAAAGAAATTAAAGACTTTTTAGAGTTTAATGAAA  100
      ||||||||||||||||||||||||  ||||| ||||||||||||||||||
seq2  CAAGGAAGGAATAAAGAAAGAAAT--AAGAC-TTTTAGAGTTTAATGAAA  94

seq1  ATGAAGCCACAACGTACCCAAACCTTTGGGACACAATGAAAGCATTTCTA  150
      |||||| ||||||||||||||| |||||||||||||||||||||||||| 
seq2  ATGAAG-CACAACGTACCCAAA-CTTTGGGACACAATGAAAGCATTTCT-  141

seq1  AGAGGGAAACTCATAGCTATGAGTGCCTTCAAGAAAAAACGGGAGAGAGC  200
      ||| ||||||||||||||||||||||  ||||||||||||||||||||||
seq2  AGA-GGAAACTCATAGCTATGAGTGC--TCAAGAAAAAACGGGAGAGAGC  188

seq1  ACATACTAGCAGCTTGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAG  250
      ||||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACATAATAGCAGC-TGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAG  237

seq1  CAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACTCA-GGGG  299
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGG  287

seq1  TGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAA  349
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGAAATCAACCAAGTGGAAACAAGAAGAACTATTC-AAGAATTAACCAAA  336

seq1  CGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCT  386

seq1  AGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAA  449
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGACTCACTAAAGGGCACAGGGACAAAATCTTAATTAACAAAATCAGAAA  436

seq1  TGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCA  486

seq1  GATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAA  536

seq1  ATGGACAAATTTCTGGAC  567
      ||||||||||||||||||
seq2  ATGGACAAATTTCTGGAC  554