BAC Information

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BAC

Clone NameB6Ng01-151D24
Chromosome8 (Build37)
Map Location 27,094,521 - 27,218,967
singlet/doubletdoublet
Overlap gene4930444A02Rik, Fnta, Hook3, 1700047A11Rik
Upstream geneAdam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1, LOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1, Ppapdc1, Bag4, Lsm1, Star, Ash2l, Kcnu1, Hgsnat
Downstream geneRnf170, Thap1, Zfp703, Erlin2, Prosc, Gpr124
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151D24.bB6Ng01-151D24.g
ACCDH947120DH947121
length9971,092
definitionDH947120|Mus musculus domesticus DNA, BAC clone: B6Ng01-151D24, 5' end.DH947121|Mus musculus domesticus DNA, BAC clone: B6Ng01-151D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,094,521 - 27,095,517)(27,217,878 - 27,218,967)
sequence
gaattccacaccaagtcagctgtagtgacacaaacttgtaatcgccaaac
tcaagaagtagaggcaggaggatgatgaatttgaacagtctgggctataa
agtgaaactcaaatttaaaaggacaacaaacaagagttccacacaggaca
tacggacatgttcagagaaccccaaatagagacatcaaataaacagttga
ttgtgtggacctaggactcagggacagaggctagagggagtttgttaaat
acataaaagcaacagagttgggtggcggcggcagtagcacacacttttaa
tcccagcattcaggggggagaggtaggtaaatctttgaatccaaggccag
cctggtctccagagcgagtttcaggacagccagggctacacagagaaatc
ctgtcctgaaaaaacaaacacaaacaaataaactgacgcagtaaaattca
actaggtctagatgctagattatatctagagacacagaaagatgctctct
cagtctcacgaacacggctgtgttcggtccagacagctatgcattgaggg
acaggcctgtcctgtgtggtataaggagtctggcaacactggcactgaat
gccagtaacactgaatgccagtaacagctccaccgtccaggagtgacaac
cacgagtgtctgcacacattgctatctccctcaaaactgctgtgggtgga
gaagtggtcgtctatggttgagacgagggaagagaagtcaggaaaggact
gccaacagaagtgagggctgcagatgagaagcctgtggccacgcccagaa
aaccagagtccaagggcaagaaacaactgagtccaggctcgctggctgcg
aagactaaaggaagaggaaggctgtcttcagctttgtactcagctggtga
catcgattaaaagcagcttcctggcatggtgaggtcacacaggggaagga
tgacagtgacagagagcccatgaggtagaggggttagcgagctctcc
gaattcactatgtgaaccaggcttgccttgaactcacagatctatcagcc
tctgtgtcctgagtgctgaaactaaaggtgtacaccacacctggcagggc
ctgtgattcttggtgtgcctacatgcctgtgcctaggaacagttaataca
ttgccctgatctaaatttaagttcctttcacatttgatttttttacaatt
ttcattgtgtatattctttctccatggtagtgtagtgtatatacataggg
gtgaacatatttcatcccttctaccttcctgccctctaatttctcaccgt
ctcccctcccactactcccctagatgggtttacttttgctgccatgtctc
tataaacttgattttatgtatcagtgtaaagtttaggaagcaaagaatgg
aaacagacaatatttgtccttctgatgctgacttaactcatttcctccag
ttgcatctattgttctataaatattatggcttcattattcttcatgctga
aaaatagatccattatgtatgtaccacactttgtttttgttagatgtttt
gagtataattttttctttctttttttttgaggtcataatatgattacatc
atttctcccttccatttcctccctccaaaccctcccatatttgcctcctt
tctctttcaagttaatagcgtttctttttcattactgttgttatattcat
atatagatgtatacacacatctacattcataaatataacttgctcagttt
acctaatgctacttgtatatatgtttacagggctgaccattggataacca
gtttatatattttataaattatacattttctttacccaaggtggatctat
aacttagctgcttgaatagtgctgtaataaacattgatgtagaattactc
tgtgctgtgttgatgggttctttgggtaaatccctagagaagtacagatg
gtcatatggagatctatttttagtgtttgaagaacctgtgtgctgatttt
aacagtgactgtgctagtttgcccacagcaacgtaataaggtgccatttt
tgtcccacccctcaccaagcaattgttatggtttcttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_27094521_27095517
seq2: B6Ng01-151D24.b_46_1042

seq1  GAATTCCACACCAAGTCAGCTGTAGTGACACAAACTTGTAATCGCCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCAAGTCAGCTGTAGTGACACAAACTTGTAATCGCCAAAC  50

seq1  TCAAGAAGTAGAGGCAGGAGGATGATGAATTTGAACAGTCTGGGCTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGTAGAGGCAGGAGGATGATGAATTTGAACAGTCTGGGCTATAA  100

seq1  AGTGAAACTCAAATTTAAAAGGACAACAAACAAGAGTTCCACACAGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAACTCAAATTTAAAAGGACAACAAACAAGAGTTCCACACAGGACA  150

seq1  TACGGACATGTTCAGAGAACCCCAAATAGAGACATCAAATAAACAGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGACATGTTCAGAGAACCCCAAATAGAGACATCAAATAAACAGTTGA  200

seq1  TTGTGTGGACCTAGGACTCAGGGACAGAGGCTAGAGGGAGTTTGTTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGGACCTAGGACTCAGGGACAGAGGCTAGAGGGAGTTTGTTAAAT  250

seq1  ACATAAAAGCAACAGAGTTGGGTGGCGGCGGCAGTAGCACACACTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAAGCAACAGAGTTGGGTGGCGGCGGCAGTAGCACACACTTTTAA  300

seq1  TCCCAGCATTCAGGGGGGAGAGGTAGGTAAATCTTTGAATCCAAGGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCATTCAGGGGGGAGAGGTAGGTAAATCTTTGAATCCAAGGCCAG  350

seq1  CCTGGTCTCCAGAGCGAGTTTCAGGACAGCCAGGGCTACACAGAGAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTCCAGAGCGAGTTTCAGGACAGCCAGGGCTACACAGAGAAATC  400

seq1  CTGTCCTGAAAAAACAAACACAAACAAATAAACTGACGCAGTAAAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGAAAAAACAAACACAAACAAATAAACTGACGCAGTAAAATTCA  450

seq1  ACTAGGTCTAGATGCTAGATTATATCTAGAGACACAGAAAGATGCTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTCTAGATGCTAGATTATATCTAGAGACACAGAAAGATGCTCTCT  500

seq1  CAGTCTCACGAACACGGCTGTGTTCGGTCCAGACAGCTATGCATTGAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCACGAACACGGCTGTGTTCGGTCCAGACAGCTATGCATTGAGGG  550

seq1  ACAGGCCTGTCCTGTGTGGTATAAGGAGTCTGGCAACACTGGCACTGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCTGTCCTGTGTGGTATAAGGAGTCTGGCAACACTGGCACTGAAT  600

seq1  GCCAGTAACACTGAATGCCAGTAACAGCTCCACCGTCCAGGAGTGACAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTAACACTGAATGCCAGTAACAGCTCCACCGTCCAGGAGTGACAAC  650

seq1  CACGAGTGTCTGCACACATTGCTATCTCCCTCAAAACTGCTGTGGGTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGTGTCTGCACACATTGCTATCTCCCTCAAAACTGCTGTGGGTGGA  700

seq1  GAAGTGGTCGTCTATGGTTGAGACGAGGGAAGAGAAGTCAGGAAAGGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGTCGTCTATGGTTGAGACGAGGGAAGAGAAGTCAGGAAAGGACT  750

seq1  GCCAACAGAAGTGAGGGCTGCAGATGAGAAGCCTGTGGCCACGCCCAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACAGAAGTGAGGGCTGCAGATGAGAAGCCTGTGGCCACGCCCAGAA  800

seq1  AACCAGAGTCCAAGGGCAAGAAACAACTGAGTCCAGGCTCGCTGGCTGCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAGTCCAAGGGCAAGAAACAACTGAGTCCAGGCTCGCTGGCTGCG  850

seq1  AAGACT-AAGGAAGAGGAAGGCTGTCTTCAGC-TTGTACTCAGCTGGTGA  898
      |||||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGACTAAAGGAAGAGGAAGGCTGTCTTCAGCTTTGTACTCAGCTGGTGA  900

seq1  CATCGATTAAAAGCAGCTTCCTGGCATGTGGAGGTCACACAGGGGAAGGA  948
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  CATCGATTAAAAGCAGCTTCCTGGCATGGTGAGGTCACACAGGGGAAGGA  950

seq1  TGACAGTGACAGAGAGCCCAGGAGGTAGAGGGGGTTAGCGGAGCTCTCC  997
      |||||||||||||||||||| |||||||| ||||||||| |||||||||
seq2  TGACAGTGACAGAGAGCCCATGAGGTAGA-GGGGTTAGC-GAGCTCTCC  997

seq1: chr8_27217878_27218967
seq2: B6Ng01-151D24.g_69_1160 (reverse)

seq1  AAAAAAAGAAACAATAACAAATTGC-TGGTGAGGGTGTGGAC--AAATGG  47
      |||||||||||| ||||| |||||| |||||||||   ||||  ||||||
seq2  AAAAAAAGAAACCATAAC-AATTGCTTGGTGAGGGGTGGGACAAAAATGG  49

seq1  CACCTTA-TACGTTGCTGCTGGGCAAACTAGCACAGTCACTGTTAAAATC  96
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  CACCTTATTACGTTGCTG-TGGGCAAACTAGCACAGTCACTGTTAAAATC  98

seq1  AGCACACAGGTTTCTCAAAACACTAAAAATAGATCTCCATATGACCATCT  146
      |||||||||| ||||  |||||||||||||||||||||||||||||||||
seq2  AGCACACAGG-TTCTTCAAACACTAAAAATAGATCTCCATATGACCATCT  147

seq1  GTACTTCTCTAGGGATTTACCCAAAGAACCCATCAACACAGCACAGAGTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTCTCTAGGGATTTACCCAAAGAACCCATCAACACAGCACAGAGTA  197

seq1  ATTCTACATCAATGTTTATTACAGCACTATTCAAGCAGCTAAGTTATAGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACATCAATGTTTATTACAGCACTATTCAAGCAGCTAAGTTATAGA  247

seq1  TCCAACCTTGGGTAAAGAAAATGTATAATTTAT-AAATATATAAACTGGT  295
      ||| ||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCC-ACCTTGGGTAAAGAAAATGTATAATTTATAAAATATATAAACTGGT  296

seq1  TATCCAATGGTCAGCCCTGTAAACATATATACAAGTAGCATTAGGTAAAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAATGGTCAGCCCTGTAAACATATATACAAGTAGCATTAGGTAAAC  346

seq1  TGAGCAAGTTATATTTATGAATGTAGATGTGTGTATACATCTATATATGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGTTATATTTATGAATGTAGATGTGTGTATACATCTATATATGA  396

seq1  ATATAACAACAGTAATGAAAAAG-AACGCTATTAACTTGAAAGAGAAAGG  444
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATATAACAACAGTAATGAAAAAGAAACGCTATTAACTTGAAAGAGAAAGG  446

seq1  AGGCAAATATGGGAGGGTTTGGAGGGAGGAAATGGAAGGGAGAAATGATG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAATATGGGAGGGTTTGGAGGGAGGAAATGGAAGGGAGAAATGATG  496

seq1  TAATCATATTATGACCTCAAAAAAAAAGAAAGAAAAAATTATACTCAAAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATATTATGACCTCAAAAAAAAAGAAAGAAAAAATTATACTCAAAA  546

seq1  CATCTAACAAAAACAAAGTGTGGTACATACATAATGGATCTATTTTTCAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAACAAAAACAAAGTGTGGTACATACATAATGGATCTATTTTTCAG  596

seq1  CATGAAGAATAATGAAGCCATAATATTTATAGAACAATAGATGCAACTGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGAATAATGAAGCCATAATATTTATAGAACAATAGATGCAACTGG  646

seq1  AGGAAATGAGTTAAGTCAGCATCAGAAGGACAAATATTGTCTGTTTCCAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGAGTTAAGTCAGCATCAGAAGGACAAATATTGTCTGTTTCCAT  696

seq1  TCTTTGCTTCCTAAACTTTACACTGATACATAAAATCAAGTTTATAGAGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTTCCTAAACTTTACACTGATACATAAAATCAAGTTTATAGAGA  746

seq1  CATGGCAGCAAAAGTAAACCCATCTAGGGGAGTAGTGGGAGGGGAGACGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAGCAAAAGTAAACCCATCTAGGGGAGTAGTGGGAGGGGAGACGG  796

seq1  TGAGAAATTAGAGGGCAGGAAGGTAGAAGGGATGAAATATGTTCACCCCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATTAGAGGGCAGGAAGGTAGAAGGGATGAAATATGTTCACCCCT  846

seq1  ATGTATATACACTACACTACCATGGAGAAAGAATATACACAATGAAAATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATACACTACACTACCATGGAGAAAGAATATACACAATGAAAATT  896

seq1  GTAAAAAAATCAAATGTGAAAGGAACTTAAATTTAGATCAGGGCAATGTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAAATCAAATGTGAAAGGAACTTAAATTTAGATCAGGGCAATGTA  946

seq1  TTAACTGTTCCTAGGCACAGGCATGTAGGCACACCAAGAATCACAGGCCC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGTTCCTAGGCACAGGCATGTAGGCACACCAAGAATCACAGGCCC  996

seq1  TGCCAGGTGTGGTGTACACCTTTAGTTTCAGCACTCAGGACACAGAGGCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGTGTGGTGTACACCTTTAGTTTCAGCACTCAGGACACAGAGGCT  1046

seq1  GATAGATCTGTGAGTTCAAGGCAAGCCTGGTTCACATAGTGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATCTGTGAGTTCAAGGCAAGCCTGGTTCACATAGTGAATTC  1092