BAC Information

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BAC

Clone NameB6Ng01-151O12
Chromosome8 (Build37)
Map Location 77,237,030 - 77,347,035
singlet/doubletdoublet
Overlap genenone
Upstream geneCrry-ps, LOC666146
Downstream geneIsx, Hmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2, LOC675507, LOC384845, LOC666211, LOC100039229, 1700007B14Rik, LOC666036
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151O12.bB6Ng01-151O12.g
ACCDH947611DH947612
length6051,115
definitionDH947611|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O12, 5' end.DH947612|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,346,431 - 77,347,035)(77,237,030 - 77,238,151)
sequence
gaattctgggatgcaggctcctcatagccgtcctgccctttagcactata
gtctgatcagcccccttctcaaggatactatgatatcaattaaggactac
aaactggaatccaccatagaagctgtacctttggccagagctattgtagc
aaagccccacaggctggatggcttcagtgacagtcatttattttctcaag
gttaagcctgagaatggtgttacattagttagggttctctagagttacag
aacatatggaaagaatctctctctatagatagaaaggggatttattagaa
tggtctacaggctatggatcagataatctaatggttgtcaccagcattaa
ggttggagttggcatctcttatagtctcaagcttggagatggtcatgttt
ctcatgcatccttacatggtctccctctgtgtctgtgttcaatctcctct
ttctattatgtttaggtgtcagatttcctcctgtgggttctttgtctcat
ttataaaaagaatttaggagcctatgcaaaaggaaacacaagtgtaattg
aaagaaaaacaacaagataactcaagctggacattcctgcagctattggg
ggagg
gaattcaattcccagatggttctcaatcatctataactccaattctaggg
tatctaacatcctgttctggcctcataaagcaccaaagacacacagtgta
cacagacatacaagcagacaagatatgcatatgcataaataaagcaatct
aggggcaggacagggcaaggcaggggaggagccgcaattgttgggctctt
tgagaggagactgctgtctgagtgagtcctggctgacctgcagtgaatgg
cagctctcctcactgtcattgtctcttctgtctttgctagttttcattgc
agaacacccagaagaacagttttatcagtcctgaagaaaaataacagatt
gtagttttaacttttttgtttgtttatttttttgtgtgttgctgttgttg
ttgttgtttttcgagacaggatttctctgtatagccctggctgttctaga
actcattctgtagaccaggctggccttgaactcagaaatctgcctgcctc
tgcttctcaagtgctgggattaaaggcgtgtgccaccacttcctggctta
aattttatataataattagacaatgcttagacaagaacaaagagatttat
aaataaatcatgattttcttgagacttaactttttgaatagtcaaaaatt
tgacaaagatccaaaaacacaattatcttagtaaaacatagaaccttttg
tttcttaagccagtttttgtgaatcttaccaagggcagatcaatatagaa
agagatcctcgttgttttaaacagaagaccagatttcagttttgtatcaa
tgtactgaattggacccaagattttaataacctttttaaaaactaaattc
ttccttttaatatccttcaacacaatgtaacaaaacaaaattttctgcct
actgaaagagttgaatctagattatcattttatgacacaatgcacaaaaa
ttactactacccattgtatccatctcagcagcctctactgtcacctacat
tctaaaagctctttacattttactttattttattttattgcctcatatga
gcctgaaggtaccaatgcacattcctacaaatgtggctaggaatttgagc
cttttcattttaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_77346431_77347035
seq2: B6Ng01-151O12.b_47_651 (reverse)

seq1  CCTCCCCCAATAGCTGCAGGAATGTCCAGCTTGAGTTATCTTGTTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCAATAGCTGCAGGAATGTCCAGCTTGAGTTATCTTGTTGTTTT  50

seq1  TCTTTCAATTACACTTGTGTTTCCTTTTGCATAGGCTCCTAAATTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAATTACACTTGTGTTTCCTTTTGCATAGGCTCCTAAATTCTTTT  100

seq1  TATAAATGAGACAAAGAACCCACAGGAGGAAATCTGACACCTAAACATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGAGACAAAGAACCCACAGGAGGAAATCTGACACCTAAACATAA  150

seq1  TAGAAAGAGGAGATTGAACACAGACACAGAGGGAGACCATGTAAGGATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAGGAGATTGAACACAGACACAGAGGGAGACCATGTAAGGATGC  200

seq1  ATGAGAAACATGACCATCTCCAAGCTTGAGACTATAAGAGATGCCAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAACATGACCATCTCCAAGCTTGAGACTATAAGAGATGCCAACTC  250

seq1  CAACCTTAATGCTGGTGACAACCATTAGATTATCTGATCCATAGCCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTAATGCTGGTGACAACCATTAGATTATCTGATCCATAGCCTGTA  300

seq1  GACCATTCTAATAAATCCCCTTTCTATCTATAGAGAGAGATTCTTTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTCTAATAAATCCCCTTTCTATCTATAGAGAGAGATTCTTTCCAT  350

seq1  ATGTTCTGTAACTCTAGAGAACCCTAACTAATGTAACACCATTCTCAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGTAACTCTAGAGAACCCTAACTAATGTAACACCATTCTCAGGC  400

seq1  TTAACCTTGAGAAAATAAATGACTGTCACTGAAGCCATCCAGCCTGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTTGAGAAAATAAATGACTGTCACTGAAGCCATCCAGCCTGTGGG  450

seq1  GCTTTGCTACAATAGCTCTGGCCAAAGGTACAGCTTCTATGGTGGATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTACAATAGCTCTGGCCAAAGGTACAGCTTCTATGGTGGATTCC  500

seq1  AGTTTGTAGTCCTTAATTGATATCATAGTATCCTTGAGAAGGGGGCTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTAGTCCTTAATTGATATCATAGTATCCTTGAGAAGGGGGCTGAT  550

seq1  CAGACTATAGTGCTAAAGGGCAGGACGGCTATGAGGAGCCTGCATCCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTATAGTGCTAAAGGGCAGGACGGCTATGAGGAGCCTGCATCCCAG  600

seq1  AATTC  605
      |||||
seq2  AATTC  605

seq1: chr8_77237030_77238151
seq2: B6Ng01-151O12.g_69_1183

seq1  GAATTCAATTCCCAGATGGTTCTCAATCATCTATAACTCCAATTCTAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCCAGATGGTTCTCAATCATCTATAACTCCAATTCTAGGG  50

seq1  TATCTAACATCCTGTTCTGGCCTCATAAAGCACCAAAGACACACAGTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAACATCCTGTTCTGGCCTCATAAAGCACCAAAGACACACAGTGTA  100

seq1  CACAGACATACAAGCAGACAAGATATGCATATGCATAAATAAAGCAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACATACAAGCAGACAAGATATGCATATGCATAAATAAAGCAATCT  150

seq1  AGGGGCAGGACAGGGCAAGGCAGGGGAGGAGCCGCAATTGTTGGGCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAGGACAGGGCAAGGCAGGGGAGGAGCCGCAATTGTTGGGCTCTT  200

seq1  TGAGAGGAGACTGCTGTCTGAGTGAGTCCTGGCTGACCTGCAGTGAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGAGACTGCTGTCTGAGTGAGTCCTGGCTGACCTGCAGTGAATGG  250

seq1  CAGCTCTCCTCACTGTCATTGTCTCTTCTGTCTTTGCTAGTTTTCATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTCCTCACTGTCATTGTCTCTTCTGTCTTTGCTAGTTTTCATTGC  300

seq1  AGAACACCCAGAAGAACAGTTTTATCAGTCCTGAAGAAAAATAACAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACCCAGAAGAACAGTTTTATCAGTCCTGAAGAAAAATAACAGATT  350

seq1  GTAGTTTTAACTTTTTTGTTTGTTTATTTTTTTGTGTGTTGCTGTTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTTAACTTTTTTGTTTGTTTATTTTTTTGTGTGTTGCTGTTGTTG  400

seq1  TTGTTGTTTTTCGAGACAGGATTTCTCTGTATAGCCCTGGCTGTTCTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTTTCGAGACAGGATTTCTCTGTATAGCCCTGGCTGTTCTAGA  450

seq1  ACTCATTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTC  500

seq1  TGCTTCTCAAGTGCTGGGATTAAAGGCGTGTGCCACCACTTCCTGGCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTCAAGTGCTGGGATTAAAGGCGTGTGCCACCACTTCCTGGCTTA  550

seq1  AATTTTATATAATAATTAGACAATGCTTAGACAAGAACAAAGAGATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATATAATAATTAGACAATGCTTAGACAAGAACAAAGAGATTTAT  600

seq1  AAATAAATCATGATTTTCTTGAGACTTAACTTTTTGAATAGTCAAAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATCATGATTTTCTTGAGACTTAACTTTTTGAATAGTCAAAAATT  650

seq1  TGACAAAGATCCAAAAACACAATTATCTTAGTAAAACATAGAACC-TTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGACAAAGATCCAAAAACACAATTATCTTAGTAAAACATAGAACCTTTTG  700

seq1  TTTCTTAAGCCAGTTTTTGTGAATCTTACCAAGGGCAGATCAATATAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAAGCCAGTTTTTGTGAATCTTACCAAGGGCAGATCAATATAGAA  750

seq1  AGAGATCCTCGTTGTTTTAAACAGAAGACCAGATTTCAGTTTTGTATCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCCTCGTTGTTTTAAACAGAAGACCAGATTTCAGTTTTGTATCAA  800

seq1  TGTACTGAAATTGGACCCAAGAATTTTAATAACC-TTTTAAAAACTAAAT  848
      ||||||| ||||||||||||| |||||||||||| |||||||||||||||
seq2  TGTACTG-AATTGGACCCAAG-ATTTTAATAACCTTTTTAAAAACTAAAT  848

seq1  TC-TCCCTTTAATATCC-TCAACACAATGTAAC-AAACAAAATTTTCTGC  895
      || ||| |||||||||| ||||||||||||||| ||||||||||||||||
seq2  TCTTCCTTTTAATATCCTTCAACACAATGTAACAAAACAAAATTTTCTGC  898

seq1  CTACTGAAAGAGTTGAATCTAGATTA-CA-TTTATGACACAATGCCACAA  943
      |||||||||||||||||||||||||| || |||||||||||||| |||||
seq2  CTACTGAAAGAGTTGAATCTAGATTATCATTTTATGACACAATG-CACAA  947

seq1  AAATTTACTACTTACACATTGTTATCCATCTCAGGCAGCCTCTACTGTCA  993
      ||| ||||||| ||| ||||| ||||||||||| ||||||||||||||||
seq2  AAA-TTACTAC-TACCCATTG-TATCCATCTCA-GCAGCCTCTACTGTCA  993

seq1  CCTACATTTCTAAAAAGCTCTTCACATTTTACTTTATTTTATTTTATTGG  1043
      |||||| |||| |||||||||| ||||||||||||||||||||||||| |
seq2  CCTACA-TTCT-AAAAGCTCTTTACATTTTACTTTATTTTATTTTATT-G  1040

seq1  CCTCATATGAGCCTGAAAGTTACAAAATGCAACATTCCTACAAAATGTGG  1093
      ||||||||||||||||| ||  |  ||||| |||||||||| ||||||||
seq2  CCTCATATGAGCCTGAAGGTACC--AATGC-ACATTCCTAC-AAATGTGG  1086

seq1  TCAAGATTTTAAAGCTTTTCATTTTAATA  1122
        | || ||| |  |||||||||||||||
seq2  CTAGGAATTTGAGCCTTTTCATTTTAATA  1115