BAC Information

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BAC

Clone NameB6Ng01-155B09
Chromosome8 (Build37)
Map Location 101,340,691 - 101,341,745
singlet/doubletsinglet
Overlap genenone
Upstream geneEG384885, LOC100041173, EG636915
Downstream geneCdh8, A330008L17Rik, LOC667531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155B09.bB6Ng01-155B09.g
ACCDH949960DH949961
length5601,048
definitionDH949960|Mus musculus domesticus DNA, BAC clone: B6Ng01-155B09, 5' end.DH949961|Mus musculus domesticus DNA, BAC clone: B6Ng01-155B09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctcctatcaaaatgaagtccagggacaaagagtggaacagagtcaaaacc
agacaccaaacccagacactactgctgatgctaggaaccccttgctgaca
agagcctggtatagctgtcccctgagaggctctgccagagcctgacaaat
acagatgcggatgcacatagccaacattggactgggtacggggattccaa
aagagaagttagggcaaggactgaaggagctgaagggttttgcaaccccc
aaaggaataataataatatcaagtatccccaaagctcccaaggactaaat
caccaaccgaagagtacacatgtgggtatgggggacccattgttccatct
ggagacatagcagatgattgcattatcaggcatcacttggagggaaaccc
ttggtcctctggaaactcgatgacccaaagtagggggatgctaaggtggt
gaagcaggagtgagtaggagggtgggggatggaccctcatagagaaaggg
gtaggggaatggataggggatttgttggaggggaaacctcgttcggggaa
caaaattaaa

gaattcactgtcctaccgcctctagtaaacaagatgtctgctccgtttca
gatgcaaacaaaaggaaaagaactataggtggatcacaataaagtgcttt
gggtgttgttcagtgggcatttggggaaagattaaaggggaggggtggag
agactgaaaattatatcttctaaagaaaacattgactagatagcccatga
caactgcattgtagtgctctggaaaactttactgaagaaatagtttttct
tttatcaccgtgctacctttcttctctaccaaaccatctatcaatctatt
tattaattaatacattagtctatacacctaatagctaccaaacttacact
ccattttactgccttcctatattttctaattacttaagttttcatgctta
ctgaattagcataatattataaaagagtcaccattttaataaatcattaa
tgtaaattacagactttttcaaatctgaagaaatgtaaggaatttgaatg
cagagataaagagaatgagtaacattagtggttaattctcacaacgctcc
acaatgaatgcgtttgtatgtagagagtgtgggtcttctttagttttgct
aaggtctcctgttgatacaattgaaatgagaatgcgaattttcatcagta
ttgcaaccctgcattttagtacagtcaaacctccttcttcatcatagcaa
tcatttgagattgtcttaagattaacatcgctacctttttttctagaaga
ttactattctcttctgatttatcctttacacatttctcttctcaaaatca
tttcagctgtttgattttcacttaaaaatatacaaatgtagagaagaata
agtagctggggtaggggaatattttggaccataataactgtcattttagt
atgtatgctgacagtggctgagattaaactatgccagcacccatgtaagg
gtggaattcttaaaagttccttcaggccagcagatggaaaactaagttag
ttattctaaatacagttacaaactactttttttaaaaatgcaaatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_101340691_101341745
seq2: B6Ng01-155B09.g_69_1116

seq1  GAATTCACTGTCCTACCGCCTCTAGTAAACAAGATGTCTGCTCCGTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTCCTACCGCCTCTAGTAAACAAGATGTCTGCTCCGTTTCA  50

seq1  GATGCAAACAAAAGGAAAAGAACTATAGGTGGATCACAATAAAGTGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAAACAAAAGGAAAAGAACTATAGGTGGATCACAATAAAGTGCTTT  100

seq1  GGGTGTTGTTCAGTGGGCATTTGGGGAAAGATTAAAGGGGAGGGGTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTGTTCAGTGGGCATTTGGGGAAAGATTAAAGGGGAGGGGTGGAG  150

seq1  AGACTGAAAATTATATCTTCTAAAGAAAACATTGACTAGATAGCCCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAAAATTATATCTTCTAAAGAAAACATTGACTAGATAGCCCATGA  200

seq1  CAACTGCATTGTAGTGCTCTGGAAAACTTTACTGAAGAAATAGTTTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCATTGTAGTGCTCTGGAAAACTTTACTGAAGAAATAGTTTTTCT  250

seq1  TTTATCACCGTGCTACCTTTCTTCTCTACCAAACCATCTATCAATCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCACCGTGCTACCTTTCTTCTCTACCAAACCATCTATCAATCTATT  300

seq1  TATTAATTAATACATTAGTCTATACACCTAATAGCTACCAAACTTACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTAATACATTAGTCTATACACCTAATAGCTACCAAACTTACACT  350

seq1  CCATTTTACTGCCTTCCTATATTTTCTAATTACTTAAGTTTTCATGCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTACTGCCTTCCTATATTTTCTAATTACTTAAGTTTTCATGCTTA  400

seq1  CTGAATTAGCATAATATTATAAAAGAGTCACCATTTTAATAAATCATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTAGCATAATATTATAAAAGAGTCACCATTTTAATAAATCATTAA  450

seq1  TGTAAATTACAGACTTTTTCAAATCTGAAGAAATGTAAGGAATTTGAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTACAGACTTTTTCAAATCTGAAGAAATGTAAGGAATTTGAATG  500

seq1  CAGAGATAAAGAGAATGAGTAACATTAGTGGTTAATTCTCACAACGCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATAAAGAGAATGAGTAACATTAGTGGTTAATTCTCACAACGCTCC  550

seq1  ACAATGAATGCGTTTGTATGTAGAGAGTGTGGGTCTTCTTTAGTTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAATGCGTTTGTATGTAGAGAGTGTGGGTCTTCTTTAGTTTTGCT  600

seq1  AAGGTCTCCTGTTGATACAATTGAAATGAGAATGCGAATTTTCATCAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTCCTGTTGATACAATTGAAATGAGAATGCGAATTTTCATCAGTA  650

seq1  TTGCAACCCTGCATTTTAGTACAGTCAAACCTCCTTCTTCATCATAGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACCCTGCATTTTAGTACAGTCAAACCTCCTTCTTCATCATAGCAA  700

seq1  TCATTTGAGATTGTCTTAAGATTAACATCGCTACC-TTTTTTCTAGAAGA  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCATTTGAGATTGTCTTAAGATTAACATCGCTACCTTTTTTTCTAGAAGA  750

seq1  TTACTATTCTCTTCTGATTTATCCTTTACACAATTTCTCTTCTCAAAATC  799
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTACTATTCTCTTCTGATTTATCCTTTACAC-ATTTCTCTTCTCAAAATC  799

seq1  ATTTCAGCTGTTTGATTTTCACTTAAAAATATACAAATGTAGAGAAGAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGCTGTTTGATTTTCACTTAAAAATATACAAATGTAGAGAAGAAT  849

seq1  AAGTAGCTGGGGTA-GGGAATATTTTGGACCAATATAACTGTCATTTTAG  898
      |||||||||||||| |||||||||||||||||  ||||||||||||||||
seq2  AAGTAGCTGGGGTAGGGGAATATTTTGGACCATAATAACTGTCATTTTAG  899

seq1  TAATGTATGCTGACAGTTGCTGAGATTAAACTATGCCAGGCACCCATGTA  948
      | ||||||||||||||| |||||||||||||||||||| |||||||||||
seq2  T-ATGTATGCTGACAGTGGCTGAGATTAAACTATGCCA-GCACCCATGTA  947

seq1  AGGGTGGAAATCTTAAAAGTTCCATCAAGGCCAGCAGATGGAAAACTAAA  998
      ||||||||| ||||||||||||| || |||||||||||||||||||| ||
seq2  AGGGTGGAATTCTTAAAAGTTCCTTC-AGGCCAGCAGATGGAAAACT-AA  995

seq1  GTCAGTTTATCTAAAAGTAAAGTATCAAACTACTTTTTTTTTAAAAAATG  1048
      || ||||  ||||||  || |||  |||||||||||||||   |||||||
seq2  GTTAGTTATTCTAAA--TACAGTTACAAACTACTTTTTTT---AAAAATG  1040

seq1  C-AATATT  1055
      | ||||||
seq2  CAAATATT  1048


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