BAC Information

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BAC

Clone NameB6Ng01-155I03
Chromosome8 (Build37)
Map Location 41,428,499 - 41,554,073
singlet/doubletdoublet
Overlap gene2900075B16Rik, Zdhhc2
Upstream geneEG621335, LOC434304, Msr1, EG621431, LOC100039072, LOC666959, EG632166, Fgf20
Downstream geneCnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2, Pdgfrl, Mtus1, Fgl1, Pcm1, Asah1, Frg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155I03.bB6Ng01-155I03.g
ACCDH950271DH950272
length1,1681,153
definitionDH950271|Mus musculus domesticus DNA, BAC clone: B6Ng01-155I03, 5' end.DH950272|Mus musculus domesticus DNA, BAC clone: B6Ng01-155I03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,428,499 - 41,429,696)(41,552,893 - 41,554,073)
sequence
gaattcatattactaggagagtgataaagattaatagtagattgataact
aaaataacattgtatcattacaaggatatttttaaaactagataaagata
aaaaagtaataagtgttagaataatctagaagcaggtctgggcatattag
ggaagatctgtaaatcagtggaaaacagactgatgccccaattatgtgta
agaataatgcgctttctatggaggttctatcctcagaacccaccaccata
cataaaagctattacaaatgggtttgtggttttttcttccaagcaccatg
gttagtaactttactcttcatagaagaatatttcataggcctaaaagaat
aaacacatcataatatagcactgtaattatgtactatagaaaatcatttc
aactttgtaaaaatacattattcctaacagcatacataccagtaatgttc
attttttactagtgattcattcacatatatggtgattatttttaaataag
tattatatatcaaatactgtcagaggtatataagtaaatttatagtctac
tgaacagttggttgtaattataaacacccataaatattaacatatcaatg
gttgttagtaccaaataatgtcttctcacacagaagtaatgaagagagtt
aagttctagggaactgggaaatagaattggagatgttcatttttgtcttt
gcctttaattatattttttaccctcattaattctcaggagtatacctcag
ttcatataaacctaactggggtccagaactgaagctgtcttgatttagga
gcactctacagaataacagttgtttccttgtgcaggagaagaatacagtg
gcagcagctgagcttctcagtccttgccaccagaatgccagcagtgcagg
ggacacccagacatgctttaaagtcataccttctctattgccttcaaatg
tataaaatgatatttctatgcacccaagtctcaagtcctaccaccttaga
tttcaaagaaaaagtaactctcccataggtacagcttagctgaaagacag
actgatgtcatgcttccatgggtgggagatagacacaatgacaggtaggg
agagtctttctactgaaacagctcactcctagaaaggaatgatgtactgt
accccaagaaataattgt
gaattcaagtagcatttagaggccttccagagccccctgaactatcaaat
ggatgtctgggagtccttttgatctccaaaggtccaactgaaggaatttc
acctttataaacattaccgcagagttaagacccagagggtgagaggcgat
gttgcaccttgacttcgtacaggaaggagcagagaagggcttttgaatta
cattatttgtttaacactaccttttaaatgtcataacatattttgggctg
gaaagatggctcagtcattaaatgctaggctcacaaccaactatcatgat
atattttattcaactaaaatatctagagatttaacaactgttttcttagg
aacagaattgtatgaatgtaattgaaactatgtatcctgtctattctacc
actgtctccctccatcattaaaagtagaatccattatagtacattttcct
tcacgtttgtttgtttgtttatcgaggcagggtttctctgtgttgccctg
gctgtcctggaactcactctgtagaccaggctggcctcaaactcagaact
ccgcctgcctctgcctcccaagtgctgggatgaaaggcacgcgccaccac
gcccggcttttccttcacctttaacgtagttttctcaaaggaacagaaaa
ccaaaagagacaacagaataaaatacatcacttgaaaataaaacaggaaa
aaaaatgtagcattactttttcactgttgaatttagtcccgcaggagtag
aaggttgttcaggatcctggttaacaaggcaagttggaaaggaacagcca
tcaccttgactgtaattaaaaacagagagagagaaagaaaaatgttcaac
cttcccgatgctgtgacccttaatacagttcctcatactgcagtaacccc
ccccccatcatacatgttgtgttacttcctagctataaatttgggtctgt
tacgaatcctaatataacatcttttattcaggatattggataggtgaccc
ctatgaaagtattcatctgcaagtgggtcaggacccatagttgagaaccc
tgctttaagccaccctgtgaagaaaaaccaacgatttactctgttttggt
gctactttattaatgaataagaaacttcgaacaagtaccttgaaatctgg
taa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_41428499_41429696
seq2: B6Ng01-155I03.b_46_1213

seq1  GAATTCATATTACTAGGAGAGTGATAAAGATTAATAGTAGATTGATAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTACTAGGAGAGTGATAAAGATTAATAGTAGATTGATAACT  50

seq1  AAAATAACATTGTATCATTACAAGGATATTTTTAAAACTAGATAAAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACATTGTATCATTACAAGGATATTTTTAAAACTAGATAAAGATA  100

seq1  AAAAAGTAATAAGTGTTAGAATAATCTAGAAGCAGGTCTGGGCATATTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTAATAAGTGTTAGAATAATCTAGAAGCAGGTCTGGGCATATTAG  150

seq1  GGAAGATCTGTAAATCAGTGGAAAACAGACTGATGCCCCAATTATGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATCTGTAAATCAGTGGAAAACAGACTGATGCCCCAATTATGTGTA  200

seq1  AGAATAATGCGCTTTCTATGGAGGTTCTATCCTCAGAACCCACCACCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAATGCGCTTTCTATGGAGGTTCTATCCTCAGAACCCACCACCATA  250

seq1  CATAAAAGCTATTACAAATGGGTTTGTGGTTTTTTCTTCCAAGCACCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAGCTATTACAAATGGGTTTGTGGTTTTTTCTTCCAAGCACCATG  300

seq1  GTTAGTAACTTTACTCTTCATAGAAGAATATTTCATAGGCCTAAAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTAACTTTACTCTTCATAGAAGAATATTTCATAGGCCTAAAAGAAT  350

seq1  AAACACATCATAATATAGCACTGTAATTATGTACTATAGAAAATCATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATCATAATATAGCACTGTAATTATGTACTATAGAAAATCATTTC  400

seq1  AACTTTGTAAAAATACATTATTCCTAACAGCATACATACCAGTAATGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTAAAAATACATTATTCCTAACAGCATACATACCAGTAATGTTC  450

seq1  ATTTTTTACTAGTGATTCATTCACATATATGGTGATTATTTTTAAATAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTACTAGTGATTCATTCACATATATGGTGATTATTTTTAAATAAG  500

seq1  TATTATATATCAAATACTGTCAGAGGTATATAAGTAAATTTATAGTCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATATCAAATACTGTCAGAGGTATATAAGTAAATTTATAGTCTAC  550

seq1  TGAACAGTTGGTTGTAATTATAAACACCCATAAATATTAACATATCAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGTTGGTTGTAATTATAAACACCCATAAATATTAACATATCAATG  600

seq1  GTTGTTAGTACCAAATAATGTCTTCTCACACAGAAGTAATGAAGAGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTAGTACCAAATAATGTCTTCTCACACAGAAGTAATGAAGAGAGTT  650

seq1  AAGTTCTAGGGAACTGGGAAATAGAATTGGAGATGTTCATTTTTGTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTAGGGAACTGGGAAATAGAATTGGAGATGTTCATTTTTGTCTTT  700

seq1  GCCTTTAATTATATTTTTTACCCTCATTAATTCTCAGGAGTATACCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAATTATATTTTTTACCCTCATTAATTCTCAGGAGTATACCTCAG  750

seq1  TTCATATAAACCTAACTGGGGTCCAGAACTGAAGCTGTCTTGATTTAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATAAACCTAACTGGGGTCCAGAACTGAAGCTGTCTTGATTTAGGA  800

seq1  GCACTCTACAGAATAACAGTTGTTTCCTTGTGCAGGAGAAGAATACAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTACAGAATAACAGTTGTTTCCTTGTGCAGGAGAAGAATACAGTG  850

seq1  GCAGCAGCTGAGCTTCTCAGTCCTTGCCACCAGAATGCCAGCAGTGCAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCTGAGCTTCTCAGTCCTTGCCACCAGAATGCCAGCAGTGCAGG  900

seq1  GGACACCCAGACATGCTTTAAAGTCATACCTTCTCTATTGCCTTCAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGACACCCAGACATGCTTTAAAGTCATACCTTCTCTATTGCCTTC-AAAT  949

seq1  GTAATAAAAATGATAATTTCTATGCACCCAAGTCTCAAGTCCTACCACCT  1000
      |||   |||||||| |||||||||||||||||||||||||||||||||||
seq2  GTA--TAAAATGAT-ATTTCTATGCACCCAAGTCTCAAGTCCTACCACCT  996

seq1  TAGAATTTCAAAGAAAAAAGGTAAACTCTCCCCATAGGTACAGCTTAGCT  1050
      ||| ||||||||||||||  || |||||| ||||||||||||||||||||
seq2  TAG-ATTTCAAAGAAAAA--GT-AACTCT-CCCATAGGTACAGCTTAGCT  1041

seq1  GAAAGACCAGGACTGAGTGTCATGCTTCCCATGGGTGGGAGATTAGACAC  1100
      |||||||   |||||| |||||||||| |||||||||||||| |||||||
seq2  GAAAGAC--AGACTGA-TGTCATGCTT-CCATGGGTGGGAGA-TAGACAC  1086

seq1  AAATGACAGTTAGGGAGAGTC-TTCTACTGAAAAGGGAGGCTCACTCCCT  1149
       |||||||| ||||||||||| |||||||||||      |||||||||  
seq2  -AATGACAGGTAGGGAGAGTCTTTCTACTGAAA----CAGCTCACTCC--  1129

seq1  TAAGAAAGGGATTGATTGATACTTGTACCCCACTAAAGAAAATAATTGT  1198
        ||||| ||| ||||   ||| ||||||||    ||| ||||||||||
seq2  -TAGAAA-GGAATGAT--GTAC-TGTACCCC----AAG-AAATAATTGT  1168

seq1: chr8_41552893_41554073
seq2: B6Ng01-155I03.g_69_1221 (reverse)

seq1  TTACCAGTATTTTCAAGGTACTTGGTTCTGAAAGTTTTCTTTTAATTTAA  50
      |||||||   ||||||||||||| |||| |||   ||||||   |||   
seq2  TTACCAG--ATTTCAAGGTACTT-GTTC-GAA--GTTTCTT---ATT--C  39

seq1  ATTAATAAAAGTAAGCAAACAAAAGACAGAGTTAAATCTGTTGTTTTTCT  100
      |||||| ||||| |||  || ||| |||||| ||||||  | ||||||||
seq2  ATTAAT-AAAGT-AGC--ACCAAA-ACAGAG-TAAATCGTTGGTTTTTCT  83

seq1  TCACAGGGGTGGC-TAGAGCAGGGTTTCTCAACCTATGGGTCCTGACCCC  149
      ||||| ||||||| || ||||||| ||||||| |||||||||||||||| 
seq2  TCACA-GGGTGGCTTAAAGCAGGG-TTCTCAA-CTATGGGTCCTGACCCA  130

seq1  CTTTGCAGATGGAATAACCTTTTCATAGGGGTCACCTATCAGATATCCTG  199
      | |||||||| |||||    ||||||||||||||||||||  ||||||||
seq2  C-TTGCAGAT-GAATA---CTTTCATAGGGGTCACCTATCCAATATCCTG  175

seq1  AATAATAGATGTTTATATTAGGATTCGTAACAGTACCAAAATTATAGCTA  249
      ||||| ||||| |||||||||||||||||||||  ||||| |||||||||
seq2  AATAAAAGATG-TTATATTAGGATTCGTAACAGACCCAAATTTATAGCTA  224

seq1  GGAAGTAACAACAACATTGTATGATGGGGGGGGGGTTACTGCAGTATGAG  299
      ||||||||| |||||| |||||||||||||||||||||||||||||||||
seq2  GGAAGTAAC-ACAACA-TGTATGATGGGGGGGGGGTTACTGCAGTATGAG  272

seq1  GAACTGTATTAAAGGGTCACAGCATCGGGAAGGTTGAACATTTTTCTTTC  349
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTATT-AAGGGTCACAGCATCGGGAAGGTTGAACATTTTTCTTTC  321

seq1  TCTCTCTCTGTTTTTAATTACAGTCAAGGTGATGGCTGTTCCTTTCCAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGTTTTTAATTACAGTCAAGGTGATGGCTGTTCCTTTCCAAC  371

seq1  TTGCCTTGTTAACCAGGATCCTGAACAACCTTCTACTCCTGCGGGACTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTGTTAACCAGGATCCTGAACAACCTTCTACTCCTGCGGGACTAA  421

seq1  ATTCAACAGTGAAAAAGTAATGCTACATTTTTTTTCCTGTTTTATTTTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACAGTGAAAAAGTAATGCTACATTTTTTTTCCTGTTTTATTTTCA  471

seq1  AGTGATGTATTTTATTCTGTTGTCTCTTTTGGTTTTCTGTTCCTTTGAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGTATTTTATTCTGTTGTCTCTTTTGGTTTTCTGTTCCTTTGAGA  521

seq1  AAACTACGTTAAAGGTGAAGGAAAAGCCGGGCGTGGTGGCGCGTGCCTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACGTTAAAGGTGAAGGAAAAGCCGGGCGTGGTGGCGCGTGCCTTT  571

seq1  CATCCCAGCACTTGGGAGGCAGAGGCAGGCGGAGTTCTGAGTTTGAGGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAGCACTTGGGAGGCAGAGGCAGGCGGAGTTCTGAGTTTGAGGCC  621

seq1  AGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCAACACAGAGAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCAACACAGAGAAA  671

seq1  CCCTGCCTCGATAAACAAACAAACAAACGTGAAGGAAAATGTACTATAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCTCGATAAACAAACAAACAAACGTGAAGGAAAATGTACTATAAT  721

seq1  GGATTCTACTTTTAATGATGGAGGGAGACAGTGGTAGAATAGACAGGATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTACTTTTAATGATGGAGGGAGACAGTGGTAGAATAGACAGGATA  771

seq1  CATAGTTTCAATTACATTCATACAATTCTGTTCCTAAGAAAACAGTTGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTTCAATTACATTCATACAATTCTGTTCCTAAGAAAACAGTTGTT  821

seq1  AAATCTCTAGATATTTTAGTTGAATAAAATATATCATGATAGTTGGTTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTAGATATTTTAGTTGAATAAAATATATCATGATAGTTGGTTGT  871

seq1  GAGCCTAGCATTTAATGACTGAGCCATCTTTCCAGCCCAAAATATGTTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTAGCATTTAATGACTGAGCCATCTTTCCAGCCCAAAATATGTTAT  921

seq1  GACATTTAAAAGGTAGTGTTAAACAAATAATGTAATTCAAAAGCCCTTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTAAAAGGTAGTGTTAAACAAATAATGTAATTCAAAAGCCCTTCT  971

seq1  CTGCTCCTTCCTGTACGAAGTCAAGGTGCAACATCGCCTCTCACCCTCTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTTCCTGTACGAAGTCAAGGTGCAACATCGCCTCTCACCCTCTG  1021

seq1  GGTCTTAACTCTGCGGTAATGTTTATAAAGGTGAAATTCCTTCAGTTGGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTAACTCTGCGGTAATGTTTATAAAGGTGAAATTCCTTCAGTTGGA  1071

seq1  CCTTTGGAGATCAAAAGGACTCCCAGACATCCATTTGATAGTTCAGGGGG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGAGATCAAAAGGACTCCCAGACATCCATTTGATAGTTCAGGGGG  1121

seq1  CTCTGGAAGGCCTCTAAATGCTACTTGAATTC  1181
      ||||||||||||||||||||||||||||||||
seq2  CTCTGGAAGGCCTCTAAATGCTACTTGAATTC  1153