BAC Information

Click to search

BAC

Clone NameB6Ng01-155O15
Chromosome8 (Build37)
Map Location 51,347,415 - 51,460,658
singlet/doubletdoublet
Overlap genenone
Upstream gene4930555F03Rik, LOC100039919, EG667495
Downstream geneLOC100039954, LOC100039966, LOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155O15.bB6Ng01-155O15.g
ACCDH950558DH950559
length1,0871,030
definitionDH950558|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O15, 5' end.DH950559|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,459,553 - 51,460,658)(51,347,415 - 51,348,451)
sequence
gaattccatcaaaaaatagcacggaaaaccttataaaaatgcaaccacta
ttgttaaactatagacatattaaataaaatttaaagtaagaggaaattat
attcatgatatatttactttcagaaaagccatttgaggattacttaaaac
ggaggacagattaaaagaccaaagagagccatgtgctgccacggtggctg
cgatgtattctcttgtagatgatgcttggggaacagtggttctcctgact
cagtgtgcagcagaatcatctagggagctttcaccaaatactcctcaatc
aagattcccctcttgattctgatttgactgatgtgtggtagaccctaggc
gagtggtattttcgaaaaaccctccaggtgattgtaaagtagggctggga
ttgaaagatagtcatgtatggaaactctagagcaagcatatatatactgc
agtatcctgaagcatgtaatggaatgtaagcatttgctttattaatgatc
ttctgccagccattcaggccaaatgataatgggggaggggctctgcttta
gtagataaatcccagcttggaaagcaccatcattagttagatcctcaacg
tttcctatttccctgagaaacaggcaagaaagagtttgagtgactcttga
gtttgagtgactacaaattcatgggttaaaaccacagctatctttgcctg
tgggtcaatgttttggtagagggtaaacaacatgaaggaaggatttacaa
ataaagctagtttaaggaaatggtttatgtcctccttctcctgatgtcat
ctaggtgcagtttaaaccattttaaacccccgatccaatgagcaatgtct
cagtggcaggatgtctggtcccactgtaaaatgcagtcccagttgaaaca
gatgtacaatggacaatctctgctgctctcattatataaactatagtgac
aaaaaaactctcagctgacaaaacatagcaaagctcttagatttttaaga
tctacaatttatatacctcaaagcattctgacccactagacacacccgag
ttgtgtttatgcatatattccctagaaatacactgat
gaattctttcttcacatcttgtcaacatttatggttatcggattttcttt
cacattcttaataatatatatgaaagcaatggaattaaacattgactgtt
ccctttcaatagaacaggtgcacaacccttcacctcctattgtcaatttg
agatttacttgtctgaattgcttcttcgtgtttttcagtgatttttttta
aactccattctcatctgttcctacattttataatcgatcccccatgtgtt
ggctatggcctgttagttatatattttgtttatcttgtttgataaaagaa
agggtttcttttaaactcaaagatttctcttcacatccatacattctaat
tacagatctgtattataataagaaaagttggaatactttaatcaaatatc
atggacttaggcattataaagtttcttaacatttatcatatgctcatatc
atttttttaaaatattgggaatccaaactaagatttatatattcaagcca
aatgctctaacactgatgtttgtcttcagccagttttttgtttgttttta
aacatatacatacatacatatatgtatgtatacatatatatttctgtatt
tattatttaggaacaaaattattgtacatagatgaaatatagatagcatg
gggtaggaggaaaaataatgccaagaaggaataatcttccttttctatga
tcagattcaaaatctcttatatgtgcatagtcatatttcttattcactat
ctgctaaaattattttacttgaattgaacttttctattttaaataattga
ggcaggctgcatgttgaatgatgagccaattaaacataaatctttgaaat
ccattagcataagacataatgtcttctttcgaggtagggagaaaaacacg
ttccacccctgaggagaaagctgtgtcttctgtctggcagcattactggt
tctggtgatttggactccctcatctacagtggcagctggttctcttgtca
catactccttgagcagctgatgagataaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51459553_51460658
seq2: B6Ng01-155O15.b_49_1135 (reverse)

seq1  ATCAGTGTATCTACATAGGGATATGTATGCATAAACACAAACTCTGTGTG  50
      |||||||||| |   |||||| || ||||||||||||| ||||| | |||
seq2  ATCAGTGTATTT--CTAGGGA-ATATATGCATAAACAC-AACTC-GGGTG  45

seq1  TGTCTATGTGTGTCCAGAATGCTTTTGAGGTTATATAAATTGTAGATCTT  100
      |||||| ||| || |||||||| ||||||| |||||||||||||||||||
seq2  TGTCTA-GTGGGT-CAGAATGC-TTTGAGG-TATATAAATTGTAGATCTT  91

seq1  TTAAAAAATCCTTAGAGCTTTGCTATGTTTTGTCAGCTGAGGGTTTTTTT  150
         |||||| || |||||||||||||||||||||||||||| |  |||||
seq2  ---AAAAAT-CTAAGAGCTTTGCTATGTTTTGTCAGCTGAGAG--TTTTT  135

seq1  TTGTCACTTATAGTTTATTATTAATGAGAGCAGCAGAGATTGTCCATTGT  200
      ||||||| ||||||||||   |||||||||||||||||||||||||||||
seq2  TTGTCAC-TATAGTTTAT--ATAATGAGAGCAGCAGAGATTGTCCATTGT  182

seq1  ACATCTGTTTCAACTGGGACTGCATTTTACAGTGGGACCAGACATCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTTTCAACTGGGACTGCATTTTACAGTGGGACCAGACATCCTGC  232

seq1  CACTGAGACATTGCTCATTGGATCGGGGGTTTAAAATGGTTTAAACTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGACATTGCTCATTGGATCGGGGGTTTAAAATGGTTTAAACTGCA  282

seq1  CCTAGATGACATTCAGGAGAAGGAGGACATAAACCATTTCCTTAAACTAG  350
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATGACA-TCAGGAGAAGGAGGACATAAACCATTTCCTTAAACTAG  331

seq1  CTTTATTTGTAAATCCTTCCTTCATGTTGTTTACCCTCTACCAAAACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTGTAAATCCTTCCTTCATGTTGTTTACCCTCTACCAAAACATT  381

seq1  GACCCACAGGCAAAGATAGCTGTGGTTTTAACCCATGAATTTGTAGTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACAGGCAAAGATAGCTGTGGTTTTAACCCATGAATTTGTAGTCAC  431

seq1  TCAAACTCAAGAGTCACTCAAACTCTTTCTTGCCTGTTTCTCAGGGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCAAGAGTCACTCAAACTCTTTCTTGCCTGTTTCTCAGGGAAAT  481

seq1  AGGAAACGTTGAGGATCTAACTAATGATGGTGCTTTCCAAGCTGGGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACGTTGAGGATCTAACTAATGATGGTGCTTTCCAAGCTGGGATTT  531

seq1  ATCTACTAAAGCAGAGCCCCTCCCCCATTATCATTTGGCCTGAATGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTAAAGCAGAGCCCCTCCCCCATTATCATTTGGCCTGAATGGCTG  581

seq1  GCAGAAGATCATTAATAAAGCAAATGCTTACATTCCATTACATGCTTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGATCATTAATAAAGCAAATGCTTACATTCCATTACATGCTTCAG  631

seq1  GATACTGCAGTATATATATGCTTGCTCTAGAGTTTCCATACATGACTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGCAGTATATATATGCTTGCTCTAGAGTTTCCATACATGACTATC  681

seq1  TTTCAATCCCAGCCCTACTTTACAATCACCTGGAGGGTTTTTCGAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATCCCAGCCCTACTTTACAATCACCTGGAGGGTTTTTCGAAAATA  731

seq1  CCACTCGCCTAGGGTCTACCACACATCAGTCAAATCAGAATCAAGAGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCGCCTAGGGTCTACCACACATCAGTCAAATCAGAATCAAGAGGGG  781

seq1  AATCTTGATTGAGGAGTATTTGGTGAAAGCTCCCTAGATGATTCTGCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGATTGAGGAGTATTTGGTGAAAGCTCCCTAGATGATTCTGCTGC  831

seq1  ACACTGAGTCAGGAGAACCACTGTTCCCCAAGCATCATCTACAAGAGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAGTCAGGAGAACCACTGTTCCCCAAGCATCATCTACAAGAGAAT  881

seq1  ACATCGCAGCCACCGTGGCAGCACATGGCTCTCTTTGGTCTTTTAATCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGCAGCCACCGTGGCAGCACATGGCTCTCTTTGGTCTTTTAATCTG  931

seq1  TCCTCCGTTTTAAGTAATCCTCAAATGGCTTTTCTGAAAGTAAATATATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCGTTTTAAGTAATCCTCAAATGGCTTTTCTGAAAGTAAATATATC  981

seq1  ATGAATATAATTTCCTCTTACTTTAAATTTTATTTAATATGTCTATAGTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATAATTTCCTCTTACTTTAAATTTTATTTAATATGTCTATAGTT  1031

seq1  TAACAATAGTGGTTGCATTTTTATAAGGTTTTCCGTGCTATTTTTTGATG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATAGTGGTTGCATTTTTATAAGGTTTTCCGTGCTATTTTTTGATG  1081

seq1  GAATTC  1106
      ||||||
seq2  GAATTC  1087

seq1: chr8_51347415_51348451
seq2: B6Ng01-155O15.g_69_1098

seq1  GAATTCTTTCTTCACATCTTGTCAACATTTATGGTTATCGGATTTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTCACATCTTGTCAACATTTATGGTTATCGGATTTTCTTT  50

seq1  CACATTCTTAATAATATATATGAAAGCAATGGAATTAAACATTGACTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCTTAATAATATATATGAAAGCAATGGAATTAAACATTGACTGTT  100

seq1  CCCTTTCAATAGAACAGGTGCACAACCCTTCACCTCCTATTGTCAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCAATAGAACAGGTGCACAACCCTTCACCTCCTATTGTCAATTTG  150

seq1  AGATTTACTTGTCTGAATTGCTTCTTCGTGTTTTTCAGTGATTTTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTACTTGTCTGAATTGCTTCTTCGTGTTTTTCAGTGATTTTTTTTA  200

seq1  AACTCCATTCTCATCTGTTCCTACATTTTATAATCGATCCCCCATGTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCATTCTCATCTGTTCCTACATTTTATAATCGATCCCCCATGTGTT  250

seq1  GGCTATGGCCTGTTAGTTATATATTTTGTTTATCTTGTTTGATAAAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGGCCTGTTAGTTATATATTTTGTTTATCTTGTTTGATAAAAGAA  300

seq1  AGGGTTTCTTTTAAACTCAAAGATTTCTCTTCACATCCATACATTCTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTTTTAAACTCAAAGATTTCTCTTCACATCCATACATTCTAAT  350

seq1  TACAGATCTGTATTATAATAAGAAAAGTTGGAATACTTTAATCAAATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATCTGTATTATAATAAGAAAAGTTGGAATACTTTAATCAAATATC  400

seq1  ATGGACTTAGGCATTATAAAGTTTCTTAACATTTATCATATGCTCATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTTAGGCATTATAAAGTTTCTTAACATTTATCATATGCTCATATC  450

seq1  ATTTTTTTAAAATATTGGGAATCCAAACTAAGATTTATATATTCAAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTAAAATATTGGGAATCCAAACTAAGATTTATATATTCAAGCCA  500

seq1  AATGCTCTAACACTGATGTTTGTCTTCAGCCAGTTTTTTGTTTGTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCTAACACTGATGTTTGTCTTCAGCCAGTTTTTTGTTTGTTTTTA  550

seq1  AACATATACATACATACATATATGTATGTATACATATATATTTCTGTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATACATACATACATATATGTATGTATACATATATATTTCTGTATT  600

seq1  TATTATTTAGGAACAAAATTATTGTACATAGATGAAATATAGATAGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTAGGAACAAAATTATTGTACATAGATGAAATATAGATAGCATG  650

seq1  GGGTAGGAGGAAAAATAATGCCAAGAAGGAATAATCTTCCTTTTCTATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGAGGAAAAATAATGCCAAGAAGGAATAATCTTCCTTTTCTATGA  700

seq1  TCAGATTCAAAATCTCTTATATGTGCATAGTCATATTTCTTATTCACTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTCAAAATCTCTTATATGTGCATAGTCATATTTCTTATTCACTAT  750

seq1  CTGCTAAAATTATTTTACTTGAATTGAACTTTTCTATTTTAAATAATTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAAATTATTTTACTTGAATTGAACTTTTCTATTTTAAATAATTGA  800

seq1  GGCAGGCTGCATGTTGAATGATGAGCCAATTAAACATAAATCTTTGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCTGCATGTTGAATGATGAGCCAATTAAACATAAATCTTTGAAAT  850

seq1  CCATTAGCATAAGACATAATGTCTTCTTTCGAGGTAGGGAGAAAAACACG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAGCATAAGACATAATGTCTTCTTTCGAGGTAGGGAGAAAAACACG  900

seq1  TTCCACCCCTGAGGAGAAAGCTGTGTCTTCTGTCTGGCAGCATTACTGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCCCTGAGGAGAAAGCTGTGTCTTCTGTCTGGCAGCATTACTGGT  950

seq1  TCTGGTGATTTGGAACTCCCTCATCTACAGTGGCAGCAGGGTTCTCTTGT  1000
      ||||||||||||| |||||||||||||||||||||||  |||||||||||
seq2  TCTGGTGATTTGG-ACTCCCTCATCTACAGTGGCAGC-TGGTTCTCTTGT  998

seq1  CAACATAACCCCTGGAGCCAAGCTGGATGAGATAAAT  1037
      | |||| || ||| ||||  |||| ||||||||||||
seq2  C-ACAT-ACTCCTTGAGC--AGCT-GATGAGATAAAT  1030