BAC Information

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BAC

Clone NameB6Ng01-156C13
Chromosome8 (Build37)
Map Location 68,692,001 - 68,693,215
singlet/doubletsinglet
Overlap geneMarch1
Upstream geneLOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156C13.bB6Ng01-156C13.g
ACCDH950737DH950738
length1,1791,046
definitionDH950737|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C13, 5' end.DH950738|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaattggcagagaagcacctgaaaaaatg
ttcaatatccttaatcatcagggaaatgcaaatcaaaacaactctgagat
tccacctcacaccagtcagaatgactatgatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggta
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccgataagaaggacacatgctccactat
gttcacagcagccttatttataatagcctgaagctggaaagatcccagat
gcccctcaacagaggaatggatacagaaaatgtgatacatttacacaatg
cagtactactcagctattaaaaacaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttagggtacccaagatataagatacaatttgccaaacgcatgaaactcaa
gaagaatgaagaccaaagtggggacactgtgccccttcttagaactcaga
acaaaacacccatggaaggagttacagagacaaagtttggagctgtgatg
aaagaatggaccatgtagagactgctatatccagggatctaccccataat
cagcttccaaatgctgacaccattgtatacactagcaagattttactgaa
aggtcccagatatagctgtctcttgtgagactaggccggggcctagaaaa
cacagaagtggatgctcacagtcagcttattggatggatcacagggctcc
caatggaggagctagagaaaatacccaaggagctaaagggatctgcaacc
ctatagtgaacaacattctgaactaaccagtactccggagctcttgactt
ctagctgcatatgtatcaaaagatgtctagtcggcatcactgaaagagag
gtcattgaacacaaactttaatatgctcagtacaggaatgccaatggcta
aaaatgggaaatggtgtgggtatggaagt

gaattctgggtcctctgtgagtggctgtatgaaataccaaagaaattcta
ttctctaggacgcctaagcagggcaagtaatacctggaaaagtctgcttt
gcggatttaaaggaattatatggcttaccaagggaaagacttagatcata
actgacacccagcaacatttcttatctttcattttatgtgctgattttct
tttttcaaaactttattgtttcacttaaaaaaatcaagtactgtttgctt
tataaataatgcctgcatctgttgttgcttggttgcttgggtctggtgaa
gaatgtgttaagtctttgaatggtcactataatgtatagacatgtaataa
taagagtaaattcctaaacttatttaaggtaaatgtcaattgttctttcc
ttactcgtgttctcattgccactttacattctggaaaaaaataagccaaa
gacattttttgttcttataaatctgtatcaagttaggaattctctttctg
tcctaattttgaaaataaaattgatgttaacataaacacacttacgctta
tttcaaacaacaatgggaaaagaccttcagtttgtataaattgtctgaat
tgtatacaatgaataatacatttctaaaatgacatgtcagttcatgctat
tataaaattataagacaatttaattcatgcaataatatcgatatcaggtt
gtaataacaggatttgagacataagaagacgtcacagaaaataaagcagt
tatgccaagtcacatgtatttttcacataaacagatcctgtgctttcaga
ctttgaatctgttgtgatttctattccatagcaaactttcattattctat
gtaaaatgtggctacatacatgtacttatgctatagtaagtatattttca
ctgttttacttattggccctctagagaacaagctgttttataagtttagt
tagcatatgtgtttactttgatgaaagtgcttcatatttagaccttccat
atagaaattaaataaaggactgtattcatttataaggtggatccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68692001_68693215
seq2: B6Ng01-156C13.g_67_1112

seq1  GAATTCTGGGTCCTCTGTGAGTGGCTGTATGAAATACCAAAGAAATTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTCCTCTGTGAGTGGCTGTATGAAATACCAAAGAAATTCTA  50

seq1  TTCTCTAGGACGCCTAAGCAGGGCAAGTAATACCTGGAAAAGTCTGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGGACGCCTAAGCAGGGCAAGTAATACCTGGAAAAGTCTGCTTT  100

seq1  GCGGATTTAAAGGAATTATATGGCTTACCAAGGGAAAGACTTAGATCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGATTTAAAGGAATTATATGGCTTACCAAGGGAAAGACTTAGATCATA  150

seq1  ACTGACACCCAGCAACATTTCTTATCTTTCATTTTATGTGCTGATTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACACCCAGCAACATTTCTTATCTTTCATTTTATGTGCTGATTTTCT  200

seq1  TTTTTCAAAACTTTATTGTTTCACTTAAAAAAATCAAGTACTGTTTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAAACTTTATTGTTTCACTTAAAAAAATCAAGTACTGTTTGCTT  250

seq1  TATAAATAATGCCTGCATCTGTTGTTGCTTGGTTGCTTGGGTCTGGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAATGCCTGCATCTGTTGTTGCTTGGTTGCTTGGGTCTGGTGAA  300

seq1  GAATGTGTTAAGTCTTTGAATGGTCACTATAATGTATAGACATGTAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTTAAGTCTTTGAATGGTCACTATAATGTATAGACATGTAATAA  350

seq1  TAAGAGTAAATTCCTAAACTTATTTAAGGTAAATGTCAATTGTTCTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTAAATTCCTAAACTTATTTAAGGTAAATGTCAATTGTTCTTTCC  400

seq1  TTACTCGTGTTCTCATTGCCACTTTACATTCTGGAAAAAAATAAGCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCGTGTTCTCATTGCCACTTTACATTCTGGAAAAAAATAAGCCAAA  450

seq1  GACATTTTTTGTTCTTATAAATCTGTATCAAGTTAGGAATTCTCTTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTTTGTTCTTATAAATCTGTATCAAGTTAGGAATTCTCTTTCTG  500

seq1  TCCTAATTTTGAAAATAAAATTGATGTTAACATAAACACACTTACGCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATTTTGAAAATAAAATTGATGTTAACATAAACACACTTACGCTTA  550

seq1  TTTCAAACAACAATGGGAAAAGACCTTCAGTTTGTATAAATTGTCTGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACAACAATGGGAAAAGACCTTCAGTTTGTATAAATTGTCTGAAT  600

seq1  TGTATACAATGAATAATACATTTCTAAAATGACATGTCAGTTCATGCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACAATGAATAATACATTTCTAAAATGACATGTCAGTTCATGCTAT  650

seq1  TATAAAATTATAAGACAATTTAATTCATGCAATAATATCGATATCAGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATTATAAGACAATTTAATTCATGCAATAATATCGATATCAGGTT  700

seq1  GTAATAACAGGATTTGAGACATAAGAAGACGTCACAGAAAATAAAGCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAACAGGATTTGAGACATAAGAAGACGTCACAGAAAATAAAGCAGT  750

seq1  TATGCCAAGTCACATGTATTTTTCACATAAACAGATCCTGTGCTTTCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCAAGTCACATGTATTTTTCACATAAACAGATCCTGTGCTTTCAGA  800

seq1  CTTTGAATCTGTTGTGATTTCTATTCCATAGCAAACTTTCATTATTCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATCTGTTGTGATTTCTATTCCATAGCAAACTTTCATTATTCTAT  850

seq1  GTAAAATGTGGCTACATACATGTACTTATGCTATAGTAAGTATATTTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTAAAATGTGGCTACATACATGTACTTATGCTATAGTAAGTATATTTTC-  899

seq1  ACTGTGTTACTTATTGG-CCTCTAGAGAACAAGCTGTTTTTAATAAGTTT  949
      ||||| ||||||||||| ||||||||||||||||||||||  ||||||||
seq2  ACTGTTTTACTTATTGGCCCTCTAGAGAACAAGCTGTTTT--ATAAGTTT  947

seq1  AGTTAGCATATGTGTTTACTTTTGATGAAAGTGCTTCATATTTAGAACCT  999
      ||||||||||||||||||| ||||||||||||||||||||||||| ||||
seq2  AGTTAGCATATGTGTTTAC-TTTGATGAAAGTGCTTCATATTTAG-ACCT  995

seq1  TCCATATAGAAATTAAATAAAGGAACTGTATTCATTTATAA-GTGGATCC  1048
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  TCCATATAGAAATTAAATAAAGG-ACTGTATTCATTTATAAGGTGGATCC  1044

seq1  CAGCCGGGCGTGGTGGCGCATGCCTTTAATCCCAGCACTCGGGAGGCAGA  1098
      ||                                                
seq2  CA------------------------------------------------  1046

seq1  GGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAATTC  1148
                                                        
seq2  --------------------------------------------------  1046

seq1  CAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTTGAAAAAAACAAACA  1198
                                                        
seq2  --------------------------------------------------  1046

seq1  AACAAAAGTGGATCCCA  1215
                       
seq2  -----------------  1046


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