BAC Information

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BAC

Clone NameB6Ng01-156G17
Chromosome8 (Build37)
Map Location 68,742,905 - 68,892,398
singlet/doubletdoublet
Overlap geneMarch1
Upstream geneLOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156G17.bB6Ng01-156G17.g
ACCDH950928DH950929
length3311,156
definitionDH950928|Mus musculus domesticus DNA, BAC clone: B6Ng01-156G17, 5' end.DH950929|Mus musculus domesticus DNA, BAC clone: B6Ng01-156G17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,892,068 - 68,892,398)(68,742,905 - 68,744,110)
sequence
taagactatgaaacaaaaattggaaaacatagcacaaggatttgaaagac
aaaaggttttaactgatgataaagaaacacatactcacacagcaatacac
ccttaagtgaagcccacaaagagagttgccacattttataacacatgtgt
agccaaatggctaatttgattaagtcacaaatctttcgaaaatctttaca
taaatttccattaagaaaaataaatagaaccttcacaggaccaagctatg
ctccagtataggcgaatgccttggccaggaagcaggagtgagtgggttgg
aaagcaggaggaggggagaggatatagggga
gaattccagaatatccttatttgttaacatagagaaacactgtcttgaaa
agcaaagaaacaaacaaacttcaggaagaatggtgaggaatctattaaac
cttggctaatcaggaaagtaggttctctcctatagcctcaggcaaggaat
cttagtaacctgatcttagtcagtgagtgctgtttcgcactttctgatct
ttatgatggtaaatagtaaattgattacattcttgtcttagttagtgctt
tactgctgtgaataaacaccatgaccaaagcaactcttctaagaacaaca
tttaattgggacgagcttatatgttcagaggttcagtccattatcatcaa
ggtagcacctagataggcctgtcgaaggaggaactgagagttcaacatct
tattgtgaaagtgaacaagaaaaatctggcttccaggcagctaggagagt
cttaaaacccacacccacaataacacactccctccaacagaggcacacct
actccaacaaggccacatcttctaatagagccactccctgggccaagcat
attcaaaccaccacaattcttatatgccaataggatagtggtagttttac
tttaatttacgataaaaataacaatagaaccttaaatacacatgatatca
gaacaaaatgagcacttggaaccagtaacagagtgatattgacataagca
ttggcaactgtactggaaatgtgagagaaaggtaaatagaagtacagtta
gttataaatgagaaaaatctctcttaggttgagagaataatcagaaaatt
ctgtgtccccaattttctaacacttatagcagagggaaaaaatagaaaga
aaagaaagaaagaaagacagaaagaaagaaagaaagagaggaagaaagaa
agaaggtcttaaaagaaagctaaataacatgcataatctgaccagcatac
atctccgtgtggccctacatacagcctctgatatgggaggtcattacagc
tcattgcattaatcaataataacattcccactggacaccagatggactca
gaacttaatactttccaccagctcagatgtggttgttaatctatatctag
ggatctggccttcagcatgagccctacaggaaacatggctgagtgattga
tcacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68892068_68892398
seq2: B6Ng01-156G17.b_49_379 (reverse)

seq1  TCCCCTATATCCTCTCCCCTCCTCCTGCTTTCCAACCCACTCACTCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTATATCCTCTCCCCTCCTCCTGCTTTCCAACCCACTCACTCCTGC  50

seq1  TTCCTGGCCAAGGCATTCGCCTATACTGGAGCATAGCTTGGTCCTGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCCAAGGCATTCGCCTATACTGGAGCATAGCTTGGTCCTGTGAA  100

seq1  GGTTCTATTTATTTTTCTTAATGGAAATTTATGTAAAGATTTTCGAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTATTTATTTTTCTTAATGGAAATTTATGTAAAGATTTTCGAAAGA  150

seq1  TTTGTGACTTAATCAAATTAGCCATTTGGCTACACATGTGTTATAAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGACTTAATCAAATTAGCCATTTGGCTACACATGTGTTATAAAATG  200

seq1  TGGCAACTCTCTTTGTGGGCTTCACTTAAGGGTGTATTGCTGTGTGAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAACTCTCTTTGTGGGCTTCACTTAAGGGTGTATTGCTGTGTGAGTA  250

seq1  TGTGTTTCTTTATCATCAGTTAAAACCTTTTGTCTTTCAAATCCTTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCTTTATCATCAGTTAAAACCTTTTGTCTTTCAAATCCTTGTGC  300

seq1  TATGTTTTCCAATTTTTGTTTCATAGTCTTA  331
      |||||||||||||||||||||||||||||||
seq2  TATGTTTTCCAATTTTTGTTTCATAGTCTTA  331

seq1: chr8_68742905_68744110
seq2: B6Ng01-156G17.g_66_1221

seq1  GAATTCCAGAATATCCTTATTTGTTAACATAGAGAAACACTGTCTTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAATATCCTTATTTGTTAACATAGAGAAACACTGTCTTGAAA  50

seq1  AGCAAAGAAACAAACAAACTTCAGGAAGAATGGTGAGGAATCTATTAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGAAACAAACAAACTTCAGGAAGAATGGTGAGGAATCTATTAAAC  100

seq1  CTTGGCTAATCAGGAAAGTAGGTTCTCTCCTATAGCCTCAGGCAAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTAATCAGGAAAGTAGGTTCTCTCCTATAGCCTCAGGCAAGGAAT  150

seq1  CTTAGTAACCTGATCTTAGTCAGTGAGTGCTGTTTCGCACTTTCTGATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTAACCTGATCTTAGTCAGTGAGTGCTGTTTCGCACTTTCTGATCT  200

seq1  TTATGATGGTAAATAGTAAATTGATTACATTCTTGTCTTAGTTAGTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGGTAAATAGTAAATTGATTACATTCTTGTCTTAGTTAGTGCTT  250

seq1  TACTGCTGTGAATAAACACCATGACCAAAGCAACTCTTCTAAGAACAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTGAATAAACACCATGACCAAAGCAACTCTTCTAAGAACAACA  300

seq1  TTTAATTGGGACGAGCTTATATGTTCAGAGGTTCAGTCCATTATCATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGGGACGAGCTTATATGTTCAGAGGTTCAGTCCATTATCATCAA  350

seq1  GGTAGCACCTAGATAGGCCTGTCGAAGGAGGAACTGAGAGTTCAACATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCACCTAGATAGGCCTGTCGAAGGAGGAACTGAGAGTTCAACATCT  400

seq1  TATTGTGAAAGTGAACAAGAAAAATCTGGCTTCCAGGCAGCTAGGAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGAAAGTGAACAAGAAAAATCTGGCTTCCAGGCAGCTAGGAGAGT  450

seq1  CTTAAAACCCACACCCACAATAACACACTCCCTCCAACAGAGGCACACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAACCCACACCCACAATAACACACTCCCTCCAACAGAGGCACACCT  500

seq1  ACTCCAACAAGGCCACATCTTCTAATAGAGCCACTCCCTGGGCCAAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAACAAGGCCACATCTTCTAATAGAGCCACTCCCTGGGCCAAGCAT  550

seq1  ATTCAAACCACCACAATTCTTATATGCCAATAGGATAGTGGTAGTTTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAACCACCACAATTCTTATATGCCAATAGGATAGTGGTAGTTTTAC  600

seq1  TTTAATTTACGATAAAAATAACAATAGAACCTTAAATACACATGATATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTACGATAAAAATAACAATAGAACCTTAAATACACATGATATCA  650

seq1  GAACAAAATGAGCACTTGGAACCAGTAACAGAGTGATATTGACATAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAATGAGCACTTGGAACCAGTAACAGAGTGATATTGACATAAGCA  700

seq1  TTGGCAACTGTACTGGAAATGTGAGAGAAAGGTAAATAGAAGTACAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAACTGTACTGGAAATGTGAGAGAAAGGTAAATAGAAGTACAGTTA  750

seq1  GTTATAAATGAGAAAAATCTCTCTTAGGTTGAGAGAATAATCAGAAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAATGAGAAAAATCTCTCTTAGGTTGAGAGAATAATCAGAAAATT  800

seq1  CTGTGTCCCCAATTTTCTAACACTTATAGCAGAGGGAAAAAAATAAGAAA  850
      |||||||||||||||||||||||||||||||||||| ||||||||   ||
seq2  CTGTGTCCCCAATTTTCTAACACTTATAGCAGAGGG-AAAAAATA--GAA  847

seq1  AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAG  900
      ||||||||||   |||||||   | |||||   |||||||  || ||| |
seq2  AGAAAAGAAA--GAAAGAAA--GACAGAAA--GAAAGAAAGAAAGAGAGG  891

seq1  AGGAAAGAAAAGAAAAGAAAGGTCTTAAAAAGAAAGCTTAAATTAACATG  950
      | ||||||||        |||||||| |||||||||||  || |||||||
seq2  AAGAAAGAAA-------GAAGGTCTT-AAAAGAAAGCT--AAATAACATG  931

seq1  CATAATCCTGACCCAGCATACATCTCCGTGTGGCCCCTACATTACAGCCT  1000
      |||||| |||| ||||||||||||||||||||| ||||||| ||||||||
seq2  CATAAT-CTGA-CCAGCATACATCTCCGTGTGG-CCCTACA-TACAGCCT  977

seq1  CTGATTATGTGAAGTTCATTACAGCTCATTGCCAATTAAATCAAATAATA  1050
      |||| |||| | || |||||||||||||||||  ||| |||| |||||||
seq2  CTGA-TATG-GGAGGTCATTACAGCTCATTGC--ATT-AATC-AATAATA  1021

seq1  ACATTCCCAACTGGACCACCAGATGGACTCAGACTTTAATTAACTTTCCC  1100
      |||||||| |||||| |||||||||||||||||  |||||  ||||| ||
seq2  ACATTCCC-ACTGGA-CACCAGATGGACTCAGAACTTAAT--ACTTT-CC  1066

seq1  ACCAGCATACAGATGTGGTTTTTGTTATCATTATCTAGGAATCAGTGGCT  1150
      ||||||   ||||||||||| |  | |||  |||||||| |||  |||| 
seq2  ACCAGC--TCAGATGTGGTTGT--TAATCTATATCTAGGGATC--TGGCC  1110

seq1  TTCAGCAAAATGAAAAGCCCTACCAGGAGACTATAGCCTAGAGTGATTGA  1200
      ||||||   |||   ||||||| ||||| || || ||   ||||||||||
seq2  TTCAGC---ATG---AGCCCTA-CAGGAAAC-ATGGC--TGAGTGATTGA  1150

seq1  TCACAC  1206
      ||||||
seq2  TCACAC  1156