BAC Information

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BAC

Clone NameB6Ng01-160K13
Chromosome8 (Build37)
Map Location 61,859,124 - 61,860,083
singlet/doubletsinglet
Overlap genenone
Upstream gene4930431L04Rik, BC030500, LOC665116, LOC436042
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160K13.bB6Ng01-160K13.g
ACCDH953975DH953976
length9471,192
definitionDH953975|Mus musculus domesticus DNA, BAC clone: B6Ng01-160K13, 5' end.DH953976|Mus musculus domesticus DNA, BAC clone: B6Ng01-160K13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagccatgcttctcttgtgggagttgtggggggcagtaacttaa
gcaggagccagagttccaggagcatgagggaaggcctacggtgtcatgta
ggtgaattatcacccttctggggttcagaactcaggttgacaggagacga
gcctgtctgtgcatagcccaatgccccacatccccagacctgcatgaagg
ctggaaacatcaggttgtcagacccatgaccaccccagacatgggaatgg
aagcaggtgggctggactgggctgaaggggaaagcagggagtggagctcc
agctgggtctcacaggggcggagcaagtccttggcttgttggagaccatg
gctgagaggccttctgcaggaaattagacatggctctttagaagacctgc
tccattgctccccgcagtagatcccaatgaaaagagacagtccatggtgg
gttttttgttgttgttgctgttgttgttttgtttgtttgtttgttttttg
tttttcaagacagggtctctgtatagcccaggctgtcctggaactcactt
ggtagaccagactggcctcaaactcagaaatctgcctgcctctgcctctg
cctctggagtgctgggattaaaggcatgcaacaccacgcccagctcaatc
catggtttgttttgtttttgtttttgttttagttttttgtttgtttgttt
tgttgtttttgttttgttttgtttggtttggtttatacatatttcctcaa
ctacattccaaaatttcccccatacctcccacccactcccctacccacca
ttccactttttggcctggcgttcccctgtactggggcaatataagtttgc
ttttccaatgggtctctctttctagtgatggccaactaggttatctcttg
atggatatgcagctagagtcaagacttcggggtactggttagtcata
gaattccaggactcaatgagaagaccaaaactaaggattataggtataga
taagaatgaagattttcaacttaatgggccattaattatcttcaacaaaa
ctatagaagaaaaactccctaaaaaagagatgtccatgaacatacaagaa
gcctatagaattccacatagacaggactagaaaggaaatttctcccaaca
cataataatcagaacaacaaatgcactaaataaagatagaatattaaaag
cagtaaaggcaaaaggtcaagtaacatatagaggcagacctattagaatt
acaccaggcttctcaccagagactataaaagccagaagatcctggacata
tgttatacagaccctaagagaatacaaatgctagcccaggctactatacc
cagcaaaactctcgattaccatagatggagaaacgaaaatattccatgac
aaaaccaaattcacacaatatctttgcactaatccatcctctcaaaggat
aataaaaggaaaactccaacacaaggagggaaatgacaccctagaaaaag
caagaaagtaatccttcaacaaacctaaaagaagatagcctcaagaacca
aatgccaactctaacaacaaaaataacaggaagtaacaattacttttcct
taatatctcttaatatcaacagacacaattcccaactaaaaacaaataga
ctaacagactagctatataaacaggacccaacattttgctgcttacagga
aacccacctcagggagaaagacaataaaaggctggaaacaattttccaag
caaacagtcagaagagacaagctggagtagccattctaatatcgaataaa
atcgacttccaaccaaaagtcacaaaaaaagacaaggagggtacttcata
ctcatcaaggtaaatcttccagatgactctcattctgatatctatgctcc
aaatgcagctatccacattcattaagaaatgtagtaagctcaaagcacac
atggcacatctcacataaagtcgaactcatacctcccctctcttcaagaa
gatcatagaacgactaacaagaccatggactaacgagtatgaaccaatga
aatggattctaagacattatctaaacaagaatacttcgaccctattgact
tctctaatcgacataataacttgtcacaaaacaggctctcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61859124_61860083
seq2: B6Ng01-160K13.b_45_991 (reverse)

seq1  TATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGCATC  50
      |||| |||||||||||||||| || |||||||||||||||||||| ||||
seq2  TATG-ACTAACCAGTACCCCGAAG-TCTTGACTCTAGCTGCATATCCATC  48

seq1  AAAAGATAACCTAGTTGGCCATCACTAGAAAGAGAGACCCATTGGAAATG  100
      || ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAGAGATAACCTAGTTGGCCATCACTAGAAAGAGAGACCCATTGGAAAAG  98

seq1  CAAACTTTATA-TGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGTGGG  149
      ||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
seq2  CAAAC-TTATATTGCCCCAGTACAGGGGAACGCCA-GGCCAAAAAGT-GG  145

seq1  AATGGGTGGGTAGGGGAGTGGGTGGGAGGGTATGGGGGAAATTTTGGAAA  199
      ||| ||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  AAT-GGTGGGTAGGGGAGTGGGTGGGA-GGTATGGGGGAAATTTTGG-AA  192

seq1  TGTAGTTGAGGAAAATATGTAATAAAACAAAACAAAACAAAAACAAAAAC  249
      ||||||||||| |||||||| ||||| |||| ||||   |||||||||  
seq2  TGTAGTTGAGG-AAATATGT-ATAAACCAAACCAAA--CAAAACAAAA--  236

seq1  AAAAAACAACAAAACAAACAAACAAAAAACTAAAACAAAAACAAAAACAA  299
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAACAAAACAAACAAACAAAAAACTAAAACAAAAACAAAAACAA  286

seq1  AACAAACCATGGATTGAGCTGGGCGTGGTGTTGCATGCCTTTAATCCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCATGGATTGAGCTGGGCGTGGTGTTGCATGCCTTTAATCCCAG  336

seq1  CACTCCAGAGGCAGAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGGCCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCAGAGGCAGAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGGCCAG  386

seq1  TCTGGTCTACCAAGTGAGTTCCAGGACAGCCTGGGCTATACAGAGACCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTACCAAGTGAGTTCCAGGACAGCCTGGGCTATACAGAGACCCT  436

seq1  GTCTTGAAAAACAAAAAACAAACAAACAAACAAAACAACAACAGCAACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAAAAACAAAAAACAAACAAACAAACAAAACAACAACAGCAACAA  486

seq1  CAACAAAAAACCCACCATGGACTGTCTCTTTTCATTGGGATCTACTGCGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAAAACCCACCATGGACTGTCTCTTTTCATTGGGATCTACTGCGG  536

seq1  GGAGCAATGGAGCAGGTCTTCTAAAGAGCCATGTCTAATTTCCTGCAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAATGGAGCAGGTCTTCTAAAGAGCCATGTCTAATTTCCTGCAGAA  586

seq1  GGCCTCTCAGCCATGGTCTCCAACAAGCCAAGGACTTGCTCCGCCCCTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTCAGCCATGGTCTCCAACAAGCCAAGGACTTGCTCCGCCCCTGT  636

seq1  GAGACCCAGCTGGAGCTCCACTCCCTGCTTTCCCCTTCAGCCCAGTCCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCAGCTGGAGCTCCACTCCCTGCTTTCCCCTTCAGCCCAGTCCAG  686

seq1  CCCACCTGCTTCCATTCCCATGTCTGGGGTGGTCATGGGTCTGACAACCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTGCTTCCATTCCCATGTCTGGGGTGGTCATGGGTCTGACAACCT  736

seq1  GATGTTTCCAGCCTTCATGCAGGTCTGGGGATGTGGGGCATTGGGCTATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTCCAGCCTTCATGCAGGTCTGGGGATGTGGGGCATTGGGCTATG  786

seq1  CACAGACAGGCTCGTCTCCTGTCAACCTGAGTTCTGAACCCCAGAAGGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACAGGCTCGTCTCCTGTCAACCTGAGTTCTGAACCCCAGAAGGGT  836

seq1  GATAATTCACCTACATGACACCGTAGGCCTTCCCTCATGCTCCTGGAACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTCACCTACATGACACCGTAGGCCTTCCCTCATGCTCCTGGAACT  886

seq1  CTGGCTCCTGCTTAAGTTACTGCCCCCCACAACTCCCACAAGAGAAGCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCCTGCTTAAGTTACTGCCCCCCACAACTCCCACAAGAGAAGCAT  936

seq1  GGCTAGAATTC  960
      |||||||||||
seq2  GGCTAGAATTC  947