BAC Information

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BAC

Clone NameB6Ng01-161H09
Chromosome8 (Build37)
Map Location 69,867,716 - 70,094,201
singlet/doubletdoublet
Overlap geneNat1, Nat2, LOC100041265, Nat3
Upstream geneMarch1, 1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
Downstream genePsd3, Sh2d4a, LOC665510, 4732435N03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161H09.bB6Ng01-161H09.g
ACCDH954564DH954565
length7891,099
definitionDH954564|Mus musculus domesticus DNA, BAC clone: B6Ng01-161H09, 5' end.DH954565|Mus musculus domesticus DNA, BAC clone: B6Ng01-161H09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,093,415 - 70,094,201)(69,867,716 - 69,868,804)
sequence
tctacaaaagaaaataaaggaaactcaacttcaaggtcttggtgaattaa
gacattgataagccacaaattcagtacaattgcttccacttgagaattat
tttttaaattttgttttatgtgtatgagtgttttcctacatgtatatcta
catggcacaaatatgcttgatgtcaactgatgccaggagtcagagctcat
ggaactggggttacaaagccatgtgggtgctagaacttaaactcaggtcc
tctgcaaagacagtcagaactttcaactactaagccatccatgcagcccc
ataagaatccttttaatggatcccttaagctttgttttagttaaaatcca
ttaaaatgcagcatggcccattattcttttgactctttaaagctgtccct
ttagggcaggtggtagctgaaaacttcaatgtttgtagaaggatttttat
gctagatagaaacaaatgtaaaatattttctgaattaagactcatgttta
agctctctggagtatgacctctcctatgccccagaatctttaatgatccc
tctccagaagccctgatgtttttgctaaagtctcctaaaaatgggttgtg
atggaaaatgagccagacaatagcattttttaatttcatggaagaaagtc
ttgaaaactagcatttttagtttaagataaagagcattcactgtttaaaa
tcccagatgaaagcctgttgcatgtttggcaggtatgagtaagtatgtga
gtatacgtgcgtgtgtgtatatgtgtgtgtgtgtgagaa
gaattctcagctccttctgcagcaccatatctgcatatccactgccatag
ttccagccatgttcataatgaactgaacttcggaaactgtaagccagccc
caattatgtgttatccttactaagatttgccttgatcgtggtgtcccttt
acagcaatgaaaaacataactgagagaggtacttaaagaggaaaggtgta
cctgtctatcatagatgaactgggtctacctgaaaggagtgagtggacaa
gagaaggatgaagccaagacaaagtttttgatcaaggctcaaagtttaat
attcagcactgggtttatatagggacagcccacagaccccatcctttcta
tcagctgggttgagttgcaaagcaagcttggtgaacagtcaattcctcaa
agctcatgtaggaaattacaaatgcaatgaggccagaggactccagctag
gtagtaaaaccatcatgggtttgtttatcttactcaagactgagggaaag
gcacaattctcccttttttgttgtttattaaaaatgagcagttatcagta
gctagactagggcacaaggtttacttgttttccataatcctgtctaggga
atagagtagcgaggcaaccatgcccatcttaggtcgctgtctatattgtt
ccttcttacccatcatggaagacaaacatagattttttgatgtatgtctc
tgtcttaagtctataggagctcaagaaatgttcttaccagtctctggcta
ccagttcttcaaaagaatactcatccccattcagaccaaaggccacgaaa
ggacataggaatatgtacttcaatgtattttcttcatagtgatgaataac
tgccatggtgtaataactgagctgccggaattgagattctgtggtgaaag
gcaccaatctgttaagattcaaggtccaaaaggttaaaagcacatattat
aactaatggtccaagcagtgtaggaaataaagttgtgaggctatggggag
tagaagagtcaggattcaaaccatctcctgattccgtccttttctccttt
ccttttggctagtccttctcaaaactttaagaactagaaatcctttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_70093415_70094201
seq2: B6Ng01-161H09.b_56_843 (reverse)

seq1  TCTCACACACACACACATATACACACACGCACGTATACTCACATACTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACACACACACACATATACACACACGCACGTATACTCACATACTTAC  50

seq1  TCATACCTGCC-AACATGCAACAGGCTTTCATCTGGGATTTTAAACAGTG  99
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCATACCTGCCAAACATGCAACAGGCTTTCATCTGGGATTTTAAACAGTG  100

seq1  AATGCTCTTTATCTTAAACTAAAAATGCTAGTTTTCAAGACTTTCTTCCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCTTTATCTTAAACTAAAAATGCTAGTTTTCAAGACTTTCTTCCA  150

seq1  TGAAATTAAAAAATGCTATTGTCTGGCTCATTTTCCATCACAACCCATTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAAAAAATGCTATTGTCTGGCTCATTTTCCATCACAACCCATTT  200

seq1  TTAGGAGACTTTAGCAAAAACATCAGGGCTTCTGGAGAGGGATCATTAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGACTTTAGCAAAAACATCAGGGCTTCTGGAGAGGGATCATTAAA  250

seq1  GATTCTGGGGCATAGGAGAGGTCATACTCCAGAGAGCTTAAACATGAGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGGGGCATAGGAGAGGTCATACTCCAGAGAGCTTAAACATGAGTC  300

seq1  TTAATTCAGAAAATATTTTACATTTGTTTCTATCTAGCATAAAAATCCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCAGAAAATATTTTACATTTGTTTCTATCTAGCATAAAAATCCTT  350

seq1  CTACAAACATTGAAGTTTTCAGCTACCACCTGCCCTAAAGGGACAGCTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAACATTGAAGTTTTCAGCTACCACCTGCCCTAAAGGGACAGCTTT  400

seq1  AAAGAGTCAAAAGAATAATGGGCCATGCTGCATTTTAATGGATTTTAACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTCAAAAGAATAATGGGCCATGCTGCATTTTAATGGATTTTAACT  450

seq1  AAAACAAAGCTTAAGGGATCCATTAAAAGGATTCTTATGGGGCTGCATGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGCTTAAGGGATCCATTAAAAGGATTCTTATGGGGCTGCATGG  500

seq1  ATGGCTTAGTAGTTGAAAGTTCTGACTGTCTTTGCAGAGGACCTGAGTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTAGTAGTTGAAAGTTCTGACTGTCTTTGCAGAGGACCTGAGTTT  550

seq1  AAGTTCTAGCACCCACATGGCTTTGTAACCCCAGTTCCATGAGCTCTGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTAGCACCCACATGGCTTTGTAACCCCAGTTCCATGAGCTCTGAC  600

seq1  TCCTGGCATCAGTTGACATCAAGCATATTTGTGCCATGTAGATATACATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCATCAGTTGACATCAAGCATATTTGTGCCATGTAGATATACATG  650

seq1  TAGGAAAACACTCATACACATAAAACAAAATTTAAAAAATAATTCTCAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAACACTCATACACATAAAACAAAATTTAAAAAATAATTCTCAAG  700

seq1  TGGAAGCAATTGTACTGAATTTGTGGCTTATCAATGTCTTAATTCACCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCAATTGTACTGAATTTGTGGCTTATCAATGTCTTAATTCACCAA  750

seq1  GACCTTGAAGTTGAGTTTCCTTTATTTTCTTTTGTAGA  787
      ||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGAAGTTGAGTTTCCTTTATTTTCTTTTGTAGA  788

seq1: chr8_69867716_69868804
seq2: B6Ng01-161H09.g_68_1166

seq1  GAATTCTCAGCTCCTTCTGCAGCACCATATCTGCATATCCACTGCCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTCCTTCTGCAGCACCATATCTGCATATCCACTGCCATAG  50

seq1  TTCCAGCCATGTTCATAATGAACTGAACTTCGGAAACTGTAAGCCAGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCCATGTTCATAATGAACTGAACTTCGGAAACTGTAAGCCAGCCC  100

seq1  CAATTATGTGTTATCCTTACTAAGATTTGCCTTGATCGTGGTGTCCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATGTGTTATCCTTACTAAGATTTGCCTTGATCGTGGTGTCCCTTT  150

seq1  ACAGCAATGAAAAACATAACTGAGAGAGGTACTTAAAGAGGAAAGGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAATGAAAAACATAACTGAGAGAGGTACTTAAAGAGGAAAGGTGTA  200

seq1  CCTGTCTATCATAGATGAACTGGGTCTACCTGAAAGGAGTGAGTGGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTATCATAGATGAACTGGGTCTACCTGAAAGGAGTGAGTGGACAA  250

seq1  GAGAAGGATGAAGCCAAGACAAAGTTTTTGATCAAGGCTCAAAGTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGATGAAGCCAAGACAAAGTTTTTGATCAAGGCTCAAAGTTTAAT  300

seq1  ATTCAGCACTGGGTTTATATAGGGACAGCCCACAGACCCCATCCTTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCACTGGGTTTATATAGGGACAGCCCACAGACCCCATCCTTTCTA  350

seq1  TCAGCTGGGTTGAGTTGCAAAGCAAGCTTGGTGAACAGTCAATTCCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGGGTTGAGTTGCAAAGCAAGCTTGGTGAACAGTCAATTCCTCAA  400

seq1  AGCTCATGTAGGAAATTACAAATGCAATGAGGCCAGAGGACTCCAGCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATGTAGGAAATTACAAATGCAATGAGGCCAGAGGACTCCAGCTAG  450

seq1  GTAGTAAAACCATCATGGGTTTGTTTATCTTACTCAAGACTGAGGGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAAACCATCATGGGTTTGTTTATCTTACTCAAGACTGAGGGAAAG  500

seq1  GCACAATTCTCCCTTTTTTGTTGTTTATTAAAAATGAGCAGTTATCAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATTCTCCCTTTTTTGTTGTTTATTAAAAATGAGCAGTTATCAGTA  550

seq1  GCTAGACTAGGGCACAAGGTTTACTTGTTTTCCATAATCCTGTCTAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACTAGGGCACAAGGTTTACTTGTTTTCCATAATCCTGTCTAGGGA  600

seq1  ATAGAGTAGCGAGGCAACCATGCCCATCTTAGGTCGCTGTCTATATTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTAGCGAGGCAACCATGCCCATCTTAGGTCGCTGTCTATATTGTT  650

seq1  CCTTCTTACCCATCATGGAAGACAAACATAGA-TTTTTGATGTATGTCTC  699
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCTTCTTACCCATCATGGAAGACAAACATAGATTTTTTGATGTATGTCTC  700

seq1  TGTCTTAAGTCTATAGGAGCTCAAG-AATGTTCTTACCAGTCTCTGGCTA  748
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGTCTTAAGTCTATAGGAGCTCAAGAAATGTTCTTACCAGTCTCTGGCTA  750

seq1  CCAG-TCTTCAAAAGAATACTCATCCCCATTCAGACCAAA-GCCACG-AA  795
      |||| ||||||||||||||||||||||||||||||||||| |||||| ||
seq2  CCAGTTCTTCAAAAGAATACTCATCCCCATTCAGACCAAAGGCCACGAAA  800

seq1  GGACATAGGAATATGTAC-TCAATGTA-TTTCTTCATAGTGATGAATAAC  843
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  GGACATAGGAATATGTACTTCAATGTATTTTCTTCATAGTGATGAATAAC  850

seq1  TGCCATGGTG-AATAACTGAGCTTGCGGAA-TGAGATTCTGT-GTGAAGG  890
      |||||||||| ||||||||||||  ||||| ||||||||||| ||||| |
seq2  TGCCATGGTGTAATAACTGAGCTGCCGGAATTGAGATTCTGTGGTGAAAG  900

seq1  CAACCAATCTGTTTAAGATTCAAGGTCCAAAA-GTTAAAAGCAACAATAT  939
        ||||||||| |||||||||||||||||||| ||||||||||   ||||
seq2  GCACCAATCTG-TTAAGATTCAAGGTCCAAAAGGTTAAAAGCA--CATAT  947

seq1  TATAACTAATGGTCCAAGCAGTGTAGAAATTAAAGTTGTGA-GCTATGGG  988
      |||||||||||||||||||||||||| || ||||||||||| ||||||||
seq2  TATAACTAATGGTCCAAGCAGTGTAGGAAATAAAGTTGTGAGGCTATGGG  997

seq1  GAAGTAG-AGAGTCAGGATTCAAACCATCT-CTGATTCTGTCCTTTTTCT  1036
      | ||||| |||||||||||||||||||||| ||||||| |||| ||||||
seq2  G-AGTAGAAGAGTCAGGATTCAAACCATCTCCTGATTCCGTCC-TTTTCT  1045

seq1  CTTTTCCTTTTGGCTAGTCCTTCTC-AAACTTTATAGACATAG-AATCCT  1084
      | ||||||||||||||||||||||| |||||||| |||  ||| ||||||
seq2  CCTTTCCTTTTGGCTAGTCCTTCTCAAAACTTTA-AGAACTAGAAATCCT  1094

seq1  TTACT  1089
      |||||
seq2  TTACT  1099