BAC Information

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BAC

Clone NameB6Ng01-164N20
Chromosome8 (Build37)
Map Location 58,601,926 - 58,789,810
singlet/doubletdoublet
Overlap geneGlra3, Hpgd
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356, LOC664916, Adam29, LOC664812
Downstream geneLOC664948, BC088983, Fbxo8, LOC100040431, EG624433, LOC654355, LOC100040515
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164N20.bB6Ng01-164N20.g
ACCDH957079DH957080
length5851,059
definitionDH957079|Mus musculus domesticus DNA, BAC clone: B6Ng01-164N20, 5' end.DH957080|Mus musculus domesticus DNA, BAC clone: B6Ng01-164N20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,789,220 - 58,789,810)(58,601,926 - 58,602,976)
sequence
cattattattcctttctatatgttttctaatctctctcatgacttctttg
acctgctgactttgatatttttagatatgtgcatttatttaatattactc
attacactcttcaaacagtctgtgtcccttaccaggtttcatacttaacc
tgtcatttctgatagagatatgatgaagttgtgtgaatgaaagctctgga
tggcaagagtgatagggagagcagaagactggctaatgagaacacgagaa
tgataccaaacctggtcagtgtggaggctgcaatgtgtgttccatggaaa
ccaagcagagtggacagaaagaaacctagctctcttcttagcccttttaa
aacagtgttacatgttaggatgaaaatcaaagagagaaggaatttcgaaa
gatgtgataatcattatggtaatactgccagaaggttaattaaaaattca
aactgaatttacctgaatttataacaatgcataaggaaacatgctactgt
tgacctatatgccccaagctcccctggctcatttatatttttataaagat
tttgtgtgtgtgtgtgagagagagagagaaagaga
gaattctgttttgctaaacatatattgcaggatcatgaaaactttccaat
tgcttccaacatatacaaatgcccatggaagaagctattgtgtctagttt
aaagaggtatttcaaactcatggtttgatataatttaagtatatattata
tttcaaaactaagcgacctgcacacacaatataaattactgagataacaa
ttgaagttatatattatttattaaagacagacaatttcatagcatgcaat
aagttttccataaagttttttggaagtcaaaatatggctgcaaaaacaaa
aacatttattagagttctaaaaaaaaattggttttagttattctatgcaa
aattacatcagtagacaaagataacttcagtggaagctttaagatgcttt
ttaatcatcatattttaattgtttccatcaaaagccaattgctttataaa
cctcacaactgaaatgtttccagcaatgataggcttttttatctcgcgtg
gaatggcctcccctatataattttaaaaatctgtctcacattttactgaa
tcaatcttgatctctttcttaccctttctatccataattatggttacttt
cactttttacattttataatatagtatgtattgagcagctaccttcatag
acctaattaagttttgaaccaaatgattacttttttctcttaagcttata
tgaaaaagacctcttttgaacaaagatataactataaaagatattaatca
atacctttaaacttgcagttttactagcaaaagaaaaaaaacagatttct
tgtttatcagtaaccattttattctcatcctttaaatttttcattgaatt
tttattataaatcggttaataaaactgtttctctaccatagagatgttat
atttttaaattttacattacattgtgtagagtttctaattaacttttttc
tgtgtacgtatgtgtgtttgtgaaagtctatttgtaccatgtgcttgaag
tttcttatggaagccagaaaagagcactggatccccttggggccagagtt
ctgcagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58789220_58789810
seq2: B6Ng01-164N20.b_46_636 (reverse)

seq1  TCTCTTTCTCTCTCTCTCTCACACACACACACAAAATCTTTATAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTCTCTCTCTCTCACACACACACACAAAATCTTTATAAAAATA  50

seq1  TAAATGAGCCAGGGGAGCTTGGGGCATATAGGTCAACAGTAGCATGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGCCAGGGGAGCTTGGGGCATATAGGTCAACAGTAGCATGTTTC  100

seq1  CTTATGCATTGTTATAAATTCAGGTAAATTCAGTTTGAATTTTTAATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCATTGTTATAAATTCAGGTAAATTCAGTTTGAATTTTTAATTAA  150

seq1  CCTTCTGGCAGTATTACCATAATGATTATCACATCTTTCGAAATTCCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGCAGTATTACCATAATGATTATCACATCTTTCGAAATTCCTTC  200

seq1  TCTCTTTGATTTTCATCCTAACATGTAACACTGTTTTAAAAGGGCTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGATTTTCATCCTAACATGTAACACTGTTTTAAAAGGGCTAAGA  250

seq1  AGAGAGCTAGGTTTCTTTCTGTCCACTCTGCTTGGTTTCCATGGAACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCTAGGTTTCTTTCTGTCCACTCTGCTTGGTTTCCATGGAACACA  300

seq1  CATTGCAGCCTCCACACTGACCAGGTTTGGTATCATTCTCGTGTTCTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAGCCTCCACACTGACCAGGTTTGGTATCATTCTCGTGTTCTCAT  350

seq1  TAGCCAGTCTTCTGCTCTCCCTATCACTCTTGCCATCCAGAGCTTTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGTCTTCTGCTCTCCCTATCACTCTTGCCATCCAGAGCTTTCATT  400

seq1  CACACAACTTCATCATATCTCTATCAGAAATGACAGGTTAAGTATGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAACTTCATCATATCTCTATCAGAAATGACAGGTTAAGTATGAAAC  450

seq1  CTGGTAAGGGACACAGACTGTTTGAAGAGTGTAATGAGTAATATTAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAAGGGACACAGACTGTTTGAAGAGTGTAATGAGTAATATTAAATA  500

seq1  AATGCACATATCTAAAAATATCAAAGTCAGCAGGTCAAAGAAGTCATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACATATCTAAAAATATCAAAGTCAGCAGGTCAAAGAAGTCATGAG  550

seq1  AGAGATTAGAAAACATATAGAAAGGAATAATAATGGAATTC  591
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTAGAAAACATATAGAAAGGAATAATAATGGAATTC  591

seq1: chr8_58601926_58602976
seq2: B6Ng01-164N20.g_69_1127

seq1  GAATTCTGTTTTGCTAAACATATATTGCAGGATCATGAAAACTTTCCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTGCTAAACATATATTGCAGGATCATGAAAACTTTCCAAT  50

seq1  TGCTTCCAACATATACAAATGCCCATGGAAGAAGCTATTGTGTCTAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCAACATATACAAATGCCCATGGAAGAAGCTATTGTGTCTAGTTT  100

seq1  AAAGAGGTATTTCAAACTCATGGTTTGATATAATTTAAGTATATATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGTATTTCAAACTCATGGTTTGATATAATTTAAGTATATATTATA  150

seq1  TTTCAAAACTAAGCGACCTGCACACACAATATAAATTACTGAGATAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAACTAAGCGACCTGCACACACAATATAAATTACTGAGATAACAA  200

seq1  TTGAAGTTATATATTATTTATTAAAGACAGACAATTTCATAGCATGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTATATATTATTTATTAAAGACAGACAATTTCATAGCATGCAAT  250

seq1  AAGTTTTCCATAAAGTTTTTTGGAAGTCAAAATATGGCTGCAAAAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTCCATAAAGTTTTTTGGAAGTCAAAATATGGCTGCAAAAACAAA  300

seq1  AACATTTATTAGAGTTCTAAAAAAAAATTGGTTTTAGTTATTCTATGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTATTAGAGTTCTAAAAAAAAATTGGTTTTAGTTATTCTATGCAA  350

seq1  AATTACATCAGTAGACAAAGATAACTTCAGTGGAAGCTTTAAGATGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATCAGTAGACAAAGATAACTTCAGTGGAAGCTTTAAGATGCTTT  400

seq1  TTAATCATCATATTTTAATTGTTTCCATCAAAAGCCAATTGCTTTATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCATCATATTTTAATTGTTTCCATCAAAAGCCAATTGCTTTATAAA  450

seq1  CCTCACAACTGAAATGTTTCCAGCAATGATAGGCTTTTTTATCTCGCGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAACTGAAATGTTTCCAGCAATGATAGGCTTTTTTATCTCGCGTG  500

seq1  GAATGGCCTCCCCTATATAATTTTAAAAATCTGTCTCACATTTTACTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCCTCCCCTATATAATTTTAAAAATCTGTCTCACATTTTACTGAA  550

seq1  TCAATCTTGATCTCTTTCTTACCCTTTCTATCCATAATTATGGTTACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTTGATCTCTTTCTTACCCTTTCTATCCATAATTATGGTTACTTT  600

seq1  CAC-TTTTACATTTTATAATATAGTATGTATTGAGCAGCTACCTTCATAG  649
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTACATTTTATAATATAGTATGTATTGAGCAGCTACCTTCATAG  650

seq1  ACCTAATTAAGTTTTGAACCAAATGATTACTTTTTTCTCTTAAGCTTATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATTAAGTTTTGAACCAAATGATTACTTTTTTCTCTTAAGCTTATA  700

seq1  TGAAAAAGACCTC-TTTGAACAAAGATATAACTATAAAAGATATTAATCA  748
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGACCTCTTTTGAACAAAGATATAACTATAAAAGATATTAATCA  750

seq1  ATACCTTTAAACTTGCAGTTTTACTAGCAAAAGAAAAAAAACAGA-TTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATACCTTTAAACTTGCAGTTTTACTAGCAAAAGAAAAAAAACAGATTTCT  800

seq1  TG-TTATCAGTAACCA-TTTATTCTCATCCTTTAAATTATTCATTG-ATT  844
      || ||||||||||||| ||||||||||||||||||||| ||||||| |||
seq2  TGTTTATCAGTAACCATTTTATTCTCATCCTTTAAATTTTTCATTGAATT  850

seq1  TTTATTATAAATCGGTTAAT-AAACTGTTTCTCTACCATAGAGATGTTAT  893
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTATTATAAATCGGTTAATAAAACTGTTTCTCTACCATAGAGATGTTAT  900

seq1  ATTTTT-AATTTTACATTACATTGTGTAGAGTTTCTAATTAAACTTTTTC  942
      |||||| |||||||||||||||||||||||||||||||||||  ||||||
seq2  ATTTTTAAATTTTACATTACATTGTGTAGAGTTTCTAATTAACTTTTTTC  950

seq1  TGTGTACGTATGTGTGTTTGTGAAAGTCTATTTGTACCATGTGCTTGAAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACGTATGTGTGTTTGTGAAAGTCTATTTGTACCATGTGCTTGAAG  1000

seq1  TGTC-TATGGAAGCCAGAAAAGAGCACTGGATCCCC-TGGGGCCAGAGTT  1040
      | || ||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TTTCTTATGGAAGCCAGAAAAGAGCACTGGATCCCCTTGGGGCCAGAGT-  1049

seq1  ATATGCAGTTG  1051
       | ||||||||
seq2  -TCTGCAGTTG  1059