BAC Information

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BAC

Clone NameB6Ng01-166B19
Chromosome8 (Build37)
Map Location 100,481,365 - 100,482,512
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC333331, LOC546090, LOC636859, EG384885
Downstream geneLOC100041173, EG636915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166B19.bB6Ng01-166B19.g
ACCDH957977DH957978
length1,1551,146
definitionDH957977|Mus musculus domesticus DNA, BAC clone: B6Ng01-166B19, 5' end.DH957978|Mus musculus domesticus DNA, BAC clone: B6Ng01-166B19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctaaggaattgtttttattacctggagctaattttcaaagg
catgtctaatagattgtaaataaatcatgattggtatttatgaaaatatc
tacacaaagccattctggcttgttttcataatactctctcttttaaaaaa
aattgatgcatatgtacatttatctacatgtatgtctaggtagcactgat
atgccttgtgcccacagaggttagcagaaggtgttgaatctcctggaata
ggagctaacactattgtgaactgccatgtttatgccaagatacgaacaca
tttccttttgtcgagcagcaagtcctcttgacaactaagctatcttacca
gtccttaacaatactattatttattaattatcagtttgatcaattacatt
atagtgtatcaatcattagaggtttattttaagaagccataatttccttg
caacttggccctaaatgtatgacatgttgtgtaagaattttatatttatg
atgtgcaaaagacactaaagaatatttagctcacaacaagtaagaggaag
ggaataaaattttctctatgttattttaaatttgaattagcttttttcaa
tttccacaaacctgaagtttattatatctccctgtgcgataaggctccat
tgtccagtgtatttattatttcattagactgctatttttttgcgtgtgat
ttttatattatttggtaagtccctccaggagagtagcaaagcttttctat
ctgatttctggaactacttacaaaaaagtagcagttaattttattttaga
taagaaacaccaaacaccattttttaaactacaagcaaaagacaaaccag
gaggtgctttcacacattttagactaagaaagtagaccagctttaatagt
aacaagtgcacacaggtatatttagaaacttggagtgtcaattgagttgt
ttctttttaaaagtaatatgcatattttgagttatgaactagttcaggca
tatttgtaagataaaacttgtcatcaagattctaaagaaatgaaaatttg
gatattttgagaagccacataattcaaaaatttaaaaataagcagcttta
aatcaatagaaggccaacaatataggcattaaaaaatatgggaagagttt
atttc
gaattctcacttgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatctaaacaatcctgagat
tccatctgacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaataggaatgctcctccattgttggtg
ggattgcaagcttgcacaaccactctggaaataagtctggcagttcctca
gaaaattggacatagtaataccagaggattctgcaatacctctcctgggc
atatattcagaagatgtgccaactggtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaataaatttatgaaattcctagacaa
atggaaggacctggagggcatcatcctgagtgaggtagcccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgataaacacatgaaacttaa
gaagaccgaagaccaaagtgtggacactttgccccgtcttggaattggga
acaaaacactcatggaaggagttacagagacaaagtttggagctgtgaca
aaaggatggaccatctagagactgccatatccggggatccatcccataat
tagcttcaaatgctgacaccattgcatctactagcaagatttttgctgaa
ggaccaagatatagctgtctcttgtcgagactatgccggggcctagcaaa
cacagaagtgattgctcacagtcagctattggattggatcacagagttcc
tattgtaggagctagagaagtacccaggagctaaagattgcaaccctata
gtgaacaacttatgacttagcagtaccctggagctctgatcctagctgca
tatgtacaaggatgctagtcggccacactggaaagaggccattgactgca
actttattgcagtaggatccagcaaatgtgaatgggtgcaagtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_100481365_100482512
seq2: B6Ng01-166B19.b_44_1198

seq1  GAATTCTTTCTAAGGAATTGTTTTTATTACCTGGAGCTAATTTTCAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTAAGGAATTGTTTTTATTACCTGGAGCTAATTTTCAAAGG  50

seq1  CATGTCTAATAGATTGTAAATAAATCATGATTGGTATTTATGAAAATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTAATAGATTGTAAATAAATCATGATTGGTATTTATGAAAATATC  100

seq1  TACACAAAGCCATTCTGGCTTGTTTTCATAATACTCTCTCTTTTAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAGCCATTCTGGCTTGTTTTCATAATACTCTCTCTTTTAAAAAA  150

seq1  AATTGATGCATATGTACATTTATCTACATGTATGTCTAGGTAGCACTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATGCATATGTACATTTATCTACATGTATGTCTAGGTAGCACTGAT  200

seq1  ATGCCTTGTGCCCACAGAGGTTAGCAGAAGGTGTTGAATCTCCTGGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTGTGCCCACAGAGGTTAGCAGAAGGTGTTGAATCTCCTGGAATA  250

seq1  GGAGCTAACACTATTGTGAACTGCCATGTTTATGCCAAGATACGAACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAACACTATTGTGAACTGCCATGTTTATGCCAAGATACGAACACA  300

seq1  TTTCCTTTTGTCGAGCAGCAAGTCCTCTTGACAACTAAGCTATCTTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTGTCGAGCAGCAAGTCCTCTTGACAACTAAGCTATCTTACCA  350

seq1  GTCCTTAACAATACTATTATTTATTAATTATCAGTTTGATCAATTACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTAACAATACTATTATTTATTAATTATCAGTTTGATCAATTACATT  400

seq1  ATAGTGTATCAATCATTAGAGGTTTATTTTAAGAAGCCATAATTTCCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTATCAATCATTAGAGGTTTATTTTAAGAAGCCATAATTTCCTTG  450

seq1  CAACTTGGCCCTAAATGTATGACATGTTGTGTAAGAATTTTATATTTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGGCCCTAAATGTATGACATGTTGTGTAAGAATTTTATATTTATG  500

seq1  ATGTGCAAAAGACACTAAAGAATATTTAGCTCACAACAAGTAAGAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAAAAGACACTAAAGAATATTTAGCTCACAACAAGTAAGAGGAAG  550

seq1  GGAATAAAATTTTCTCTATGTTATTTTAAATTTGAATTAGCTTTTTTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAAATTTTCTCTATGTTATTTTAAATTTGAATTAGCTTTTTTCAA  600

seq1  TTTCCACAAACCTGAAGTTTATTATATCTCCCTGTGCGATAAGGCTCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACAAACCTGAAGTTTATTATATCTCCCTGTGCGATAAGGCTCCAT  650

seq1  TGTCCAGTGTATTTATTATTTCATTAGACTGCTATTTTTTTGCGTGTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGTGTATTTATTATTTCATTAGACTGCTATTTTTTTGCGTGTGAT  700

seq1  TTTTATATTATTTGGTAAGTCCCTCCAGGAGAGTAGCAAAGCTTTTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATTATTTGGTAAGTCCCTCCAGGAGAGTAGCAAAGCTTTTCTAT  750

seq1  CTGATTTCTGGAACTACTTACAAAAAAGTAGCAGTTAATTTTATTTTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCTGGAACTACTTACAAAAAAGTAGCAGTTAATTTTATTTTAGA  800

seq1  TAAGAAACACCAAACACCATTTTTTAAACTACAAGCAAAAGACAAACCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACACCAAACACCATTTTTTAAACTACAAGCAAAAGACAAACCAG  850

seq1  GAGGTGCTTTCACACATTTTAGACTAAGAAAGTAGACCAGCTTTAATAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGCTTTCACACATTTTAGACTAAGAAAGTAGACCAGCTTTAATAGT  900

seq1  AACAAGTGCACACAGGTATATTTAGAAACTTGGAGTGTCAATTGAGTTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTGCACACAGGTATATTTAGAAACTTGGAGTGTCAATTGAGTTGT  950

seq1  TTCTTTTTAAAAGTAATATGCATATTTTGAGTTATGAACTAGTTCAGGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAAAAGTAATATGCATATTTTGAGTTATGAACTAGTTCAGGCA  1000

seq1  TA-TTGTAAGATAAAACTTGTCATCAAGATTCTAAAGAAATGAGAATTTG  1049
      || |||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATTTGTAAGATAAAACTTGTCATCAAGATTCTAAAGAAATGAAAATTTG  1050

seq1  AATA-TGTGAGAAG-CACATAATCAAAAAATTTAAAAATAAGCAGCTTTA  1097
       ||| | ||||||| ||||||||  |||||||||||||||||||||||||
seq2  GATATTTTGAGAAGCCACATAATTCAAAAATTTAAAAATAAGCAGCTTTA  1100

seq1  AATCAATAGA--GGCAACAATATA-GCATTAAAAAATATGG--AGAGTTT  1142
      ||||||||||  | |||||||||| ||||||||||||||||  |||| ||
seq2  AATCAATAGAAGGCCAACAATATAGGCATTAAAAAATATGGGAAGAG-TT  1149

seq1  TATTTC  1148
      ||||||
seq2  TATTTC  1155